RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 ADAP2Q9NPF8 381 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 GPRC5BQ9NZH0 403 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 RCOR3Q9P2K3 495 aaPredicted RBP5.59□□□□□ -1.51
HERC4-206ENST00000427635 PCDHGA11Q9Y5H2 935 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 AP4B1Q9Y6B7 739 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 ZNF521Q96K83 1311 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 ATP6AP2A0A1C7CYW4 349 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 BBIP1A8MTZ0 92 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 SMAD9O15198 467 aaKnown RBP5.59□□□□□ -1.51
HERC4-206ENST00000427635 SASH3O75995 380 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 METTL18O95568 372 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 CHMP24386 653 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 ADSSP30520 456 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 SHMT2P34897 504 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 CRADDP78560 199 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 IL18Q14116 193 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 TMEM201Q5SNT2 666 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 CIR1Q86X95 450 aaPredicted RBP5.59□□□□□ -1.51
HERC4-206ENST00000427635 LAS2Q8IYD9 372 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 PCDH20Q8N6Y1 951 aaKnown RBP5.59□□□□□ -1.51
HERC4-206ENST00000427635 C22orf15Q8WYQ4 148 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 ZFRQ96KR1 1074 aaKnown RBP5.59□□□□□ -1.51
HERC4-206ENST00000427635 PARPBPQ9NWS1 579 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 IL20Q9NYY1 176 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 ZNF282Q9UDV7 671 aaPredicted RBP5.59□□□□□ -1.51
HERC4-206ENST00000427635 MAGEL2Q9UJ55 1249 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 BORCS7-ASMTA0A0B4J1R7 106 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 UPK3BL1B0FP48 263 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 UPK3BL2E5RIL1 263 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 RNF13O43567 381 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 KDM4BO94953 1096 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 IL1AP01583 271 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 TSHRP16473 764 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 TSPAN8P19075 237 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 MPSTP25325 297 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 PTX3P26022 381 aaPredicted RBP5.59□□□□□ -1.51
HERC4-206ENST00000427635 APLNRP35414 380 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 ETV3P41162 512 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 RABIFP47224 123 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 PON2Q15165 354 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 LRIT3Q3SXY7 679 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 SMUG1Q53HV7 270 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 RNASEH2BQ5TBB1 312 aaKnown RBP5.59□□□□□ -1.51
HERC4-206ENST00000427635 FAM69BQ5VUD6 431 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 SLC39A4Q6P5W5 647 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 SMARCD3Q6STE5 483 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 ZNF571Q7Z3V5 609 aaPredicted RBP5.59□□□□□ -1.51
HERC4-206ENST00000427635 YTHDF3Q7Z739 585 aaKnown RBP5.59□□□□□ -1.51
HERC4-206ENST00000427635 TMPRSS6Q8IU80 811 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 SIRT2Q8IXJ6 389 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 LRRC34Q8IZ02 419 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 C12orf29Q8N999 325 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 IL17RCQ8NAC3 791 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 GSTCDQ8NEC7 633 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 OR7D4Q8NG98 312 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 OR10H4Q8NGA5 316 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 COQ8AQ8NI60 647 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 TCP10LQ8TDR4 215 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 BORCS7Q96B45 105 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 CLPTM1LQ96KA5 538 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 RBP7Q96R05 134 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 RIOK2Q9BVS4 552 aaKnown RBP5.59□□□□□ -1.51
HERC4-206ENST00000427635 ARHGAP39Q9C0H5 1083 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 ADAM19Q9H013 955 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 SEMA6AQ9H2E6 1030 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 GOLGA2P5Q9HBQ8 144 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.59□□□□□ -1.51
HERC4-206ENST00000427635 TMEM184CQ9NVA4 438 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 KCNIP1Q9NZI2 227 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 GRHPRQ9UBQ7 328 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 WNT6Q9Y6F9 365 aa5.59□□□□□ -1.51
HERC4-206ENST00000427635 A0A1W2PPH5 198 aa5.59□□□□□ -1.52
HERC4-206ENST00000427635 GGT3PA6NGU5 568 aa5.59□□□□□ -1.52
HERC4-206ENST00000427635 TNFRSF11BO00300 401 aa5.59□□□□□ -1.52
HERC4-206ENST00000427635 MMP20O60882 483 aa5.59□□□□□ -1.52
HERC4-206ENST00000427635 RNGTTO60942 597 aaKnown RBP5.59□□□□□ -1.52
HERC4-206ENST00000427635 ADAMTS4O75173 837 aa5.59□□□□□ -1.52
HERC4-206ENST00000427635 TYRP14679 529 aa5.59□□□□□ -1.52
HERC4-206ENST00000427635 ZNF30P17039 623 aa5.59□□□□□ -1.52
HERC4-206ENST00000427635 PTPN4P29074 926 aa5.59□□□□□ -1.52
HERC4-206ENST00000427635 CTSKP43235 329 aa5.59□□□□□ -1.52
HERC4-206ENST00000427635 DGCR6Q14129 220 aa5.59□□□□□ -1.52
HERC4-206ENST00000427635 DOC2AQ14183 400 aa5.59□□□□□ -1.52
HERC4-206ENST00000427635 CLCA4Q14CN2 919 aa5.59□□□□□ -1.52
HERC4-206ENST00000427635 PRKD1Q15139 912 aaPredicted RBP5.59□□□□□ -1.52
HERC4-206ENST00000427635 GPR68Q15743 365 aa5.59□□□□□ -1.52
HERC4-206ENST00000427635 C1orf189Q5VU69 101 aa5.59□□□□□ -1.52
HERC4-206ENST00000427635 SPESP1Q6UW49 350 aa5.59□□□□□ -1.52
HERC4-206ENST00000427635 CILP2Q8IUL8 1156 aa5.59□□□□□ -1.52
HERC4-206ENST00000427635 TCEAL8Q8IYN2 117 aa5.59□□□□□ -1.52
HERC4-206ENST00000427635 OR5T2Q8NGG2 359 aa5.59□□□□□ -1.52
HERC4-206ENST00000427635 OR52E4Q8NGH9 312 aa5.59□□□□□ -1.52
HERC4-206ENST00000427635 PPP1R35Q8TAP8 253 aa5.59□□□□□ -1.52
HERC4-206ENST00000427635 CYP2W1Q8TAV3 490 aa5.59□□□□□ -1.52
HERC4-206ENST00000427635 SNX27Q96L92 541 aa5.59□□□□□ -1.52
HERC4-206ENST00000427635 WDR92Q96MX6 357 aa5.59□□□□□ -1.52
HERC4-206ENST00000427635 CAMK1GQ96NX5 476 aa5.59□□□□□ -1.52
HERC4-206ENST00000427635 PURBQ96QR8 312 aaKnown RBP5.59□□□□□ -1.52
HERC4-206ENST00000427635 PELOQ9BRX2 385 aaKnown RBP5.59□□□□□ -1.52
HERC4-206ENST00000427635 CCDC106Q9BWC9 280 aa5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms