RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 ZCCHC7Q8N3Z6 543 aaKnown RBP13.47□□□□□ -0.25
RPL28-202ENST00000426763 RPLP0P6Q8NHW5 317 aa13.47□□□□□ -0.25
RPL28-202ENST00000426763 CAMK1GQ96NX5 476 aa13.47□□□□□ -0.25
RPL28-202ENST00000426763 MRPS26Q9BYN8 205 aaKnown RBP13.47□□□□□ -0.25
RPL28-202ENST00000426763 KCNH6Q9H252 994 aa13.47□□□□□ -0.25
RPL28-202ENST00000426763 FAM120CQ9NX05 1096 aaKnown RBP13.47□□□□□ -0.25
RPL28-202ENST00000426763 WWP2O00308 870 aa13.47□□□□□ -0.25
RPL28-202ENST00000426763 C1GALT1C1LP0DN25 315 aa13.47□□□□□ -0.25
RPL28-202ENST00000426763 ENGP17813 658 aa13.47□□□□□ -0.25
RPL28-202ENST00000426763 YAP1P46937 504 aaKnown RBP13.47□□□□□ -0.25
RPL28-202ENST00000426763 ERVFC1P60507 584 aa13.47□□□□□ -0.25
RPL28-202ENST00000426763 HNRNPA1L2Q32P51 320 aaKnown RBP13.47□□□□□ -0.25
RPL28-202ENST00000426763 ZNF311Q5JNZ3 666 aa13.47□□□□□ -0.25
RPL28-202ENST00000426763 ZNF689Q96CS4 500 aaPredicted RBP13.47□□□□□ -0.25
RPL28-202ENST00000426763 MARCH4Q9P2E8 410 aaPredicted RBP13.47□□□□□ -0.25
RPL28-202ENST00000426763 DNMT3BQ9UBC3 853 aaKnown RBP13.47□□□□□ -0.25
RPL28-202ENST00000426763 RFPL1O75677 317 aa13.46□□□□□ -0.25
RPL28-202ENST00000426763 GADD45GO95257 159 aa13.46□□□□□ -0.25
RPL28-202ENST00000426763 PLD6Q8N2A8 252 aaKnown RBP13.46□□□□□ -0.25
RPL28-202ENST00000426763 OR56A1Q8NGH5 318 aa13.46□□□□□ -0.25
RPL28-202ENST00000426763 CGREF1Q99674 301 aa13.46□□□□□ -0.25
RPL28-202ENST00000426763 YIPF4Q9BSR8 244 aa13.46□□□□□ -0.25
RPL28-202ENST00000426763 ZBP1Q9H171 429 aa13.46□□□□□ -0.25
RPL28-202ENST00000426763 CLK4Q9HAZ1 481 aaKnown RBP13.46□□□□□ -0.25
RPL28-202ENST00000426763 Q9N2J8 555 aa13.46□□□□□ -0.25
RPL28-202ENST00000426763 MARCH5Q9NX47 278 aa13.46□□□□□ -0.25
RPL28-202ENST00000426763 ZSCAN32Q9NX65 697 aa13.46□□□□□ -0.25
RPL28-202ENST00000426763 OR6C74A6NCV1 312 aa13.46□□□□□ -0.25
RPL28-202ENST00000426763 PSMD11O00231 422 aa13.46□□□□□ -0.25
RPL28-202ENST00000426763 BCKDKO14874 412 aa13.46□□□□□ -0.25
RPL28-202ENST00000426763 TMCC2O75069 709 aa13.46□□□□□ -0.25
RPL28-202ENST00000426763 JUNP05412 331 aaKnown RBP13.46□□□□□ -0.25
RPL28-202ENST00000426763 THRBP10828 461 aa13.46□□□□□ -0.25
RPL28-202ENST00000426763 HNRNPA2B1P22626 353 aaKnown RBP13.46□□□□□ -0.25
RPL28-202ENST00000426763 PTGES3Q15185 160 aaKnown RBP13.46□□□□□ -0.25
RPL28-202ENST00000426763 EPGNQ6UW88 154 aa13.46□□□□□ -0.25
RPL28-202ENST00000426763 NUP54Q7Z3B4 507 aa13.46□□□□□ -0.25
RPL28-202ENST00000426763 LINC01465Q8N7H1 131 aa13.46□□□□□ -0.25
RPL28-202ENST00000426763 LRRC58Q96CX6 371 aa13.46□□□□□ -0.25
RPL28-202ENST00000426763 KIAA0355O15063 1070 aa13.46□□□□□ -0.25
RPL28-202ENST00000426763 SYPP08247 313 aa13.46□□□□□ -0.25
RPL28-202ENST00000426763 MYL9P24844 172 aa13.46□□□□□ -0.25
RPL28-202ENST00000426763 AGTR2P50052 363 aa13.46□□□□□ -0.25
RPL28-202ENST00000426763 TECRLQ5HYJ1 363 aa13.46□□□□□ -0.25
RPL28-202ENST00000426763 LPCAT4Q643R3 524 aa13.46□□□□□ -0.25
RPL28-202ENST00000426763 ALKBH2Q6NS38 261 aa13.46□□□□□ -0.25
RPL28-202ENST00000426763 FAM81AQ8TBF8 368 aa13.46□□□□□ -0.25
RPL28-202ENST00000426763 HLA-CQ95604 372 aa13.46□□□□□ -0.25
RPL28-202ENST00000426763 TSACCQ96A04 125 aaPredicted RBP13.46□□□□□ -0.25
RPL28-202ENST00000426763 IL21RQ9HBE5 538 aa13.46□□□□□ -0.25
RPL28-202ENST00000426763 CAPN5O15484 640 aaPredicted RBP13.46□□□□□ -0.26
RPL28-202ENST00000426763 ITGB7P26010 798 aa13.46□□□□□ -0.26
RPL28-202ENST00000426763 SIM2Q14190 667 aaPredicted RBP13.46□□□□□ -0.26
RPL28-202ENST00000426763 C16orf72Q14CZ0 275 aa13.46□□□□□ -0.26
RPL28-202ENST00000426763 SIX1Q15475 284 aaPredicted RBP13.46□□□□□ -0.26
RPL28-202ENST00000426763 RANBP10Q6VN20 620 aa13.46□□□□□ -0.26
RPL28-202ENST00000426763 OR7A2PQ8NGA2 310 aa13.46□□□□□ -0.26
RPL28-202ENST00000426763 OR5AK3PQ8NH89 298 aa13.46□□□□□ -0.26
RPL28-202ENST00000426763 RNF38Q9H0F5 515 aa13.46□□□□□ -0.26
RPL28-202ENST00000426763 PLK4O00444 970 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 TLX3O43711 291 aaPredicted RBP13.45□□□□□ -0.26
RPL28-202ENST00000426763 MT-ND1P03886 318 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 THEGLP0DJG4 465 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 RAP2AP10114 183 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 ARSDP51689 593 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 TRAP1Q12931 704 aaKnown RBP13.45□□□□□ -0.26
RPL28-202ENST00000426763 KBTBD8Q8NFY9 601 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 RMI1Q9H9A7 625 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 NR1H2P55055 460 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 ZNF763Q0D2J5 394 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 TRIM71Q2Q1W2 868 aaKnown RBP13.45□□□□□ -0.26
RPL28-202ENST00000426763 ZNF57Q68EA5 555 aaPredicted RBP13.45□□□□□ -0.26
RPL28-202ENST00000426763 TMPRSS11AQ6ZMR5 421 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 PLA2G15Q8NCC3 412 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 FAM110BQ8TC76 370 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 COL21A1Q96P44 957 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 SYT11Q9BT88 431 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 ZNF576Q9H609 170 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 ALKBH4Q9NXW9 302 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 SMPD3Q9NY59 655 aaPredicted RBP13.45□□□□□ -0.26
RPL28-202ENST00000426763 RIMKLBQ9ULI2 386 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 LINC01553A4QN01 128 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 MPZL2O60487 215 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 RSL1D1O76021 490 aaKnown RBP13.45□□□□□ -0.26
RPL28-202ENST00000426763 FDXRP22570 491 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 TCEA1P23193 301 aaKnown RBP13.45□□□□□ -0.26
RPL28-202ENST00000426763 HOXC13P31276 330 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 CD68P34810 354 aaPredicted RBP13.45□□□□□ -0.26
RPL28-202ENST00000426763 DGKQP52824 942 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 CXXC5Q7LFL8 322 aaKnown RBP13.45□□□□□ -0.26
RPL28-202ENST00000426763 ASPGQ86U10 573 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 AMIGO1Q86WK6 493 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 KIAA1143Q96AT1 154 aaPredicted RBP13.45□□□□□ -0.26
RPL28-202ENST00000426763 KCNA7Q96RP8 456 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 HERPUD2Q9BSE4 406 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 CADM1Q9BY67 442 aaKnown RBP13.45□□□□□ -0.26
RPL28-202ENST00000426763 MKKSQ9NPJ1 570 aaPredicted RBP13.45□□□□□ -0.26
RPL28-202ENST00000426763 MS4A12Q9NXJ0 267 aa13.45□□□□□ -0.26
RPL28-202ENST00000426763 MYH9P35579 1960 aaKnown RBP13.45□□□□□ -0.26
RPL28-202ENST00000426763 FAM149AA5PLN7 773 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms