RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 PDAP1Q13442 181 aaKnown RBP17.48■□□□□ 0.39
SMARCAL1-205ENST00000425815 NAE1Q13564 534 aa17.48■□□□□ 0.39
SMARCAL1-205ENST00000425815 SLC26A11Q86WA9 606 aa17.48■□□□□ 0.39
SMARCAL1-205ENST00000425815 CSNK1A1LQ8N752 337 aa17.48■□□□□ 0.39
SMARCAL1-205ENST00000425815 SGPP1Q9BX95 441 aa17.48■□□□□ 0.39
SMARCAL1-205ENST00000425815 WDR54Q9H977 334 aa17.48■□□□□ 0.39
SMARCAL1-205ENST00000425815 SAYSD1Q9NPB0 183 aa17.48■□□□□ 0.39
SMARCAL1-205ENST00000425815 TMEM184CQ9NVA4 438 aa17.48■□□□□ 0.39
SMARCAL1-205ENST00000425815 P4HTMQ9NXG6 502 aa17.48■□□□□ 0.39
SMARCAL1-205ENST00000425815 ZFATQ9P243 1243 aa17.48■□□□□ 0.39
SMARCAL1-205ENST00000425815 SPTA1P02549 2419 aa17.47■□□□□ 0.39
SMARCAL1-205ENST00000425815 P2RX6O15547 441 aa17.47■□□□□ 0.39
SMARCAL1-205ENST00000425815 FOXS1O43638 330 aa17.47■□□□□ 0.39
SMARCAL1-205ENST00000425815 PIM1P11309 404 aaPredicted RBP17.47■□□□□ 0.39
SMARCAL1-205ENST00000425815 EZRP15311 586 aaKnown RBP17.47■□□□□ 0.39
SMARCAL1-205ENST00000425815 NPPBP16860 134 aa17.47■□□□□ 0.39
SMARCAL1-205ENST00000425815 TAS2R39P59534 338 aa17.47■□□□□ 0.39
SMARCAL1-205ENST00000425815 GPX6P59796 221 aa17.47■□□□□ 0.39
SMARCAL1-205ENST00000425815 ZNF460Q14592 562 aa17.47■□□□□ 0.39
SMARCAL1-205ENST00000425815 DCAF10Q5QP82 559 aa17.47■□□□□ 0.39
SMARCAL1-205ENST00000425815 THEMIS2Q5TEJ8 643 aa17.47■□□□□ 0.39
SMARCAL1-205ENST00000425815 PRAMEF13Q5VWM6 474 aa17.47■□□□□ 0.39
SMARCAL1-205ENST00000425815 ZDHHC24Q6UX98 284 aa17.47■□□□□ 0.39
SMARCAL1-205ENST00000425815 CAPN12Q6ZSI9 719 aa17.47■□□□□ 0.39
SMARCAL1-205ENST00000425815 SHISA6Q6ZSJ9 500 aa17.47■□□□□ 0.39
SMARCAL1-205ENST00000425815 PALM2Q8IXS6 379 aa17.47■□□□□ 0.39
SMARCAL1-205ENST00000425815 PYROXD1Q8WU10 500 aa17.47■□□□□ 0.39
SMARCAL1-205ENST00000425815 IP6K3Q96PC2 410 aa17.47■□□□□ 0.39
SMARCAL1-205ENST00000425815 MESP1Q9BRJ9 268 aa17.47■□□□□ 0.39
SMARCAL1-205ENST00000425815 SOX17Q9H6I2 414 aaPredicted RBP17.47■□□□□ 0.39
SMARCAL1-205ENST00000425815 ZNF304Q9HCX3 659 aa17.47■□□□□ 0.39
SMARCAL1-205ENST00000425815 CCDC177Q9NQR7 707 aaPredicted RBP17.47■□□□□ 0.39
SMARCAL1-205ENST00000425815 FAM95CA0A1B0GW59 222 aa17.46■□□□□ 0.39
SMARCAL1-205ENST00000425815 SOCS6O14544 535 aa17.46■□□□□ 0.39
SMARCAL1-205ENST00000425815 NDC80O14777 642 aa17.46■□□□□ 0.39
SMARCAL1-205ENST00000425815 EIF3HO15372 352 aaKnown RBP eCLIP17.46■□□□□ 0.39
SMARCAL1-205ENST00000425815 LCMT2O60294 686 aaKnown RBP17.46■□□□□ 0.39
SMARCAL1-205ENST00000425815 SAT1P21673 171 aa17.46■□□□□ 0.39
SMARCAL1-205ENST00000425815 MMP11P24347 488 aa17.46■□□□□ 0.39
SMARCAL1-205ENST00000425815 CSNK1G2P78368 415 aa17.46■□□□□ 0.39
SMARCAL1-205ENST00000425815 CALCOCO2Q13137 446 aa17.46■□□□□ 0.39
SMARCAL1-205ENST00000425815 MUM1Q2TAK8 710 aa17.46■□□□□ 0.39
SMARCAL1-205ENST00000425815 PRMT9Q6P2P2 845 aa17.46■□□□□ 0.39
SMARCAL1-205ENST00000425815 SBSNQ6UWP8 590 aa17.46■□□□□ 0.39
SMARCAL1-205ENST00000425815 CYS1Q717R9 158 aa17.46■□□□□ 0.39
SMARCAL1-205ENST00000425815 VN1R4Q7Z5H5 301 aa17.46■□□□□ 0.39
SMARCAL1-205ENST00000425815 ADCK2Q7Z695 626 aa17.46■□□□□ 0.39
SMARCAL1-205ENST00000425815 CEP97Q8IW35 865 aa17.46■□□□□ 0.39
SMARCAL1-205ENST00000425815 TEX19Q8NA77 164 aa17.46■□□□□ 0.39
SMARCAL1-205ENST00000425815 OR56A3Q8NH54 315 aa17.46■□□□□ 0.39
SMARCAL1-205ENST00000425815 ANKRD49Q8WVL7 239 aa17.46■□□□□ 0.39
SMARCAL1-205ENST00000425815 OR4K3Q96R72 315 aa17.46■□□□□ 0.39
SMARCAL1-205ENST00000425815 UTP6Q9NYH9 597 aaKnown RBP17.46■□□□□ 0.39
SMARCAL1-205ENST00000425815 MRPS2Q9Y399 296 aaKnown RBP17.46■□□□□ 0.39
SMARCAL1-205ENST00000425815 IGLV3-12A0A075B6K2 115 aa17.45■□□□□ 0.38
SMARCAL1-205ENST00000425815 KCNE1BA0A087WTH5 132 aa17.45■□□□□ 0.38
SMARCAL1-205ENST00000425815 CDC7O00311 574 aa17.45■□□□□ 0.38
SMARCAL1-205ENST00000425815 WISP3O95389 354 aaPredicted RBP17.45■□□□□ 0.38
SMARCAL1-205ENST00000425815 STATHP02808 62 aa17.45■□□□□ 0.38
SMARCAL1-205ENST00000425815 HIST1H2AGP0C0S8 130 aaPredicted RBP17.45■□□□□ 0.38
SMARCAL1-205ENST00000425815 ZNF37AP17032 561 aaPredicted RBP17.45■□□□□ 0.38
SMARCAL1-205ENST00000425815 HIST1H2ADP20671 130 aa17.45■□□□□ 0.38
SMARCAL1-205ENST00000425815 HRH2P25021 359 aa17.45■□□□□ 0.38
SMARCAL1-205ENST00000425815 CSRP3P50461 194 aa17.45■□□□□ 0.38
SMARCAL1-205ENST00000425815 PGDP52209 483 aa17.45■□□□□ 0.38
SMARCAL1-205ENST00000425815 RRADP55042 308 aa17.45■□□□□ 0.38
SMARCAL1-205ENST00000425815 PLTPP55058 493 aa17.45■□□□□ 0.38
SMARCAL1-205ENST00000425815 IGFBP7Q16270 282 aa17.45■□□□□ 0.38
SMARCAL1-205ENST00000425815 PPP1R3AQ16821 1122 aa17.45■□□□□ 0.38
SMARCAL1-205ENST00000425815 KIRREL2Q6UWL6 708 aa17.45■□□□□ 0.38
SMARCAL1-205ENST00000425815 LCTLQ6UWM7 567 aa17.45■□□□□ 0.38
SMARCAL1-205ENST00000425815 LAPTM4BQ86VI4 370 aa17.45■□□□□ 0.38
SMARCAL1-205ENST00000425815 SHISA5Q8N114 240 aa17.45■□□□□ 0.38
SMARCAL1-205ENST00000425815 FBXO25Q8TCJ0 367 aa17.45■□□□□ 0.38
SMARCAL1-205ENST00000425815 STT3BQ8TCJ2 826 aa17.45■□□□□ 0.38
SMARCAL1-205ENST00000425815 COL26A1Q96A83 441 aa17.45■□□□□ 0.38
SMARCAL1-205ENST00000425815 NACC2Q96BF6 587 aa17.45■□□□□ 0.38
SMARCAL1-205ENST00000425815 PYCR2Q96C36 320 aa17.45■□□□□ 0.38
SMARCAL1-205ENST00000425815 FBXL8Q96CD0 374 aa17.45■□□□□ 0.38
SMARCAL1-205ENST00000425815 CABS1Q96KC9 395 aa17.45■□□□□ 0.38
SMARCAL1-205ENST00000425815 HIST1H2AHQ96KK5 128 aa17.45■□□□□ 0.38
SMARCAL1-205ENST00000425815 FER1L6-AS2Q96M78 137 aa17.45■□□□□ 0.38
SMARCAL1-205ENST00000425815 SMAD5Q99717 465 aaKnown RBP17.45■□□□□ 0.38
SMARCAL1-205ENST00000425815 HIST1H2AJQ99878 128 aa17.45■□□□□ 0.38
SMARCAL1-205ENST00000425815 MACROD1Q9BQ69 325 aa17.45■□□□□ 0.38
SMARCAL1-205ENST00000425815 H2AFJQ9BTM1 129 aa17.45■□□□□ 0.38
SMARCAL1-205ENST00000425815 PCBD2Q9H0N5 130 aa17.45■□□□□ 0.38
SMARCAL1-205ENST00000425815 RHOJQ9H4E5 214 aa17.45■□□□□ 0.38
SMARCAL1-205ENST00000425815 ARL15Q9NXU5 204 aa17.45■□□□□ 0.38
SMARCAL1-205ENST00000425815 MTO1Q9Y2Z2 717 aaKnown RBP17.45■□□□□ 0.38
SMARCAL1-205ENST00000425815 HS3ST3B1Q9Y662 390 aa17.45■□□□□ 0.38
SMARCAL1-205ENST00000425815 TCRBV9S1A1TA0A576 114 aa17.44■□□□□ 0.38
SMARCAL1-205ENST00000425815 FEZF1A0PJY2 475 aa17.44■□□□□ 0.38
SMARCAL1-205ENST00000425815 AGPSO00116 658 aa17.44■□□□□ 0.38
SMARCAL1-205ENST00000425815 PEX12O00623 359 aa17.44■□□□□ 0.38
SMARCAL1-205ENST00000425815 FFAR3O14843 346 aa17.44■□□□□ 0.38
SMARCAL1-205ENST00000425815 GPR42O15529 346 aa17.44■□□□□ 0.38
SMARCAL1-205ENST00000425815 ZGLP1P0C6A0 271 aa17.44■□□□□ 0.38
SMARCAL1-205ENST00000425815 SLC26A3P40879 764 aa17.44■□□□□ 0.38
SMARCAL1-205ENST00000425815 BCL6P41182 706 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms