RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 ZNF285Q96NJ3 590 aa10.47□□□□□ -0.73
USP49-204ENST00000423567 PRAP1Q96NZ9 151 aa10.47□□□□□ -0.73
USP49-204ENST00000423567 EGFL8Q99944 293 aa10.47□□□□□ -0.73
USP49-204ENST00000423567 HAUS8Q9BT25 410 aa10.47□□□□□ -0.73
USP49-204ENST00000423567 STARD5Q9NSY2 213 aa10.47□□□□□ -0.73
USP49-204ENST00000423567 ZDHHC18Q9NUE0 388 aa10.47□□□□□ -0.73
USP49-204ENST00000423567 TMEM184CQ9NVA4 438 aa10.47□□□□□ -0.73
USP49-204ENST00000423567 GEMIN8Q9NWZ8 242 aaKnown RBP10.47□□□□□ -0.73
USP49-204ENST00000423567 CTNNAL1Q9UBT7 734 aa10.47□□□□□ -0.73
USP49-204ENST00000423567 DMGDHQ9UI17 866 aaKnown RBP10.47□□□□□ -0.73
USP49-204ENST00000423567 TCFL5Q9UL49 500 aa10.47□□□□□ -0.73
USP49-204ENST00000423567 MTO1Q9Y2Z2 717 aaKnown RBP10.47□□□□□ -0.73
USP49-204ENST00000423567 CACNA1GO43497 2377 aa10.46□□□□□ -0.73
USP49-204ENST00000423567 LOC105369274A0A096LPK9 316 aa10.46□□□□□ -0.73
USP49-204ENST00000423567 LOC102723532A0A0G2JNH3 316 aa10.46□□□□□ -0.73
USP49-204ENST00000423567 FITM1A5D6W6 292 aa10.46□□□□□ -0.73
USP49-204ENST00000423567 NPEPPSL1A6NEC2 478 aa10.46□□□□□ -0.73
USP49-204ENST00000423567 H0YGG7 62 aa10.46□□□□□ -0.73
USP49-204ENST00000423567 PRB1P04280 392 aa10.46□□□□□ -0.73
USP49-204ENST00000423567 ANXA5P08758 320 aa10.46□□□□□ -0.73
USP49-204ENST00000423567 FOLR3P41439 243 aa10.46□□□□□ -0.73
USP49-204ENST00000423567 ARF3P61204 181 aaPredicted RBP10.46□□□□□ -0.73
USP49-204ENST00000423567 RPS15AP62244 130 aaKnown RBP10.46□□□□□ -0.73
USP49-204ENST00000423567 YBX1P67809 324 aaKnown RBP10.46□□□□□ -0.73
USP49-204ENST00000423567 KCNAB2Q13303 367 aa10.46□□□□□ -0.73
USP49-204ENST00000423567 SLC9A5Q14940 896 aa10.46□□□□□ -0.73
USP49-204ENST00000423567 SLMAPQ14BN4 828 aa10.46□□□□□ -0.73
USP49-204ENST00000423567 ZNF425Q6IV72 752 aa10.46□□□□□ -0.73
USP49-204ENST00000423567 FBXO42Q6P3S6 717 aa10.46□□□□□ -0.73
USP49-204ENST00000423567 LCTLQ6UWM7 567 aa10.46□□□□□ -0.73
USP49-204ENST00000423567 RAPH1Q70E73 1250 aa10.46□□□□□ -0.73
USP49-204ENST00000423567 CEP97Q8IW35 865 aa10.46□□□□□ -0.73
USP49-204ENST00000423567 OR4N4Q8N0Y3 316 aa10.46□□□□□ -0.73
USP49-204ENST00000423567 TBC1D19Q8N5T2 526 aa10.46□□□□□ -0.73
USP49-204ENST00000423567 CSNK1A1LQ8N752 337 aa10.46□□□□□ -0.73
USP49-204ENST00000423567 FBXL8Q96CD0 374 aa10.46□□□□□ -0.73
USP49-204ENST00000423567 CABS1Q96KC9 395 aa10.46□□□□□ -0.73
USP49-204ENST00000423567 CYTH2Q99418 400 aa10.46□□□□□ -0.73
USP49-204ENST00000423567 FMO2Q99518 471 aa10.46□□□□□ -0.73
USP49-204ENST00000423567 GPR22Q99680 433 aa10.46□□□□□ -0.73
USP49-204ENST00000423567 MCMBPQ9BTE3 642 aa10.46□□□□□ -0.73
USP49-204ENST00000423567 ENAMQ9NRM1 1142 aa10.46□□□□□ -0.73
USP49-204ENST00000423567 CUEDC1Q9NWM3 386 aaPredicted RBP10.46□□□□□ -0.73
USP49-204ENST00000423567 TUBD1Q9UJT1 453 aa10.46□□□□□ -0.73
USP49-204ENST00000423567 PTRH2Q9Y3E5 179 aaKnown RBP10.46□□□□□ -0.73
USP49-204ENST00000423567 DYRK1BQ9Y463 629 aa10.46□□□□□ -0.73
USP49-204ENST00000423567 IGKV1-8A0A0C4DH67 115 aa10.45□□□□□ -0.74
USP49-204ENST00000423567 CDC7O00311 574 aa10.45□□□□□ -0.74
USP49-204ENST00000423567 HAT1O14929 419 aa10.45□□□□□ -0.74
USP49-204ENST00000423567 PRPF4O43172 522 aaKnown RBP eCLIP10.45□□□□□ -0.74
USP49-204ENST00000423567 PHGDHO43175 533 aaKnown RBP10.45□□□□□ -0.74
USP49-204ENST00000423567 NRP2O60462 931 aa10.45□□□□□ -0.74
USP49-204ENST00000423567 RFPL1O75677 317 aa10.45□□□□□ -0.74
USP49-204ENST00000423567 CAPN1P07384 714 aa10.45□□□□□ -0.74
USP49-204ENST00000423567 GCGRP47871 477 aa10.45□□□□□ -0.74
USP49-204ENST00000423567 HNMTP50135 292 aa10.45□□□□□ -0.74
USP49-204ENST00000423567 CCR8P51685 355 aa10.45□□□□□ -0.74
USP49-204ENST00000423567 RAB10P61026 200 aa10.45□□□□□ -0.74
USP49-204ENST00000423567 ATP6V0D1P61421 351 aa10.45□□□□□ -0.74
USP49-204ENST00000423567 CDKL1Q00532 357 aa10.45□□□□□ -0.74
USP49-204ENST00000423567 IL10RAQ13651 578 aa10.45□□□□□ -0.74
USP49-204ENST00000423567 UAP1Q16222 522 aaPredicted RBP10.45□□□□□ -0.74
USP49-204ENST00000423567 NDUFA9Q16795 377 aa10.45□□□□□ -0.74
USP49-204ENST00000423567 PRMT9Q6P2P2 845 aa10.45□□□□□ -0.74
USP49-204ENST00000423567 SBSNQ6UWP8 590 aa10.45□□□□□ -0.74
USP49-204ENST00000423567 TMEM207Q6UWW9 146 aa10.45□□□□□ -0.74
USP49-204ENST00000423567 IFT20Q8IY31 132 aa10.45□□□□□ -0.74
USP49-204ENST00000423567 EXD3Q8N9H8 876 aa10.45□□□□□ -0.74
USP49-204ENST00000423567 OR56A3Q8NH54 315 aa10.45□□□□□ -0.74
USP49-204ENST00000423567 COL26A1Q96A83 441 aa10.45□□□□□ -0.74
USP49-204ENST00000423567 FKBP10Q96AY3 582 aa10.45□□□□□ -0.74
USP49-204ENST00000423567 THAP11Q96EK4 314 aa10.45□□□□□ -0.74
USP49-204ENST00000423567 IP6K3Q96PC2 410 aa10.45□□□□□ -0.74
USP49-204ENST00000423567 OR2A5Q96R48 311 aa10.45□□□□□ -0.74
USP49-204ENST00000423567 PRR14Q9BWN1 585 aa10.45□□□□□ -0.74
USP49-204ENST00000423567 SGPP1Q9BX95 441 aa10.45□□□□□ -0.74
USP49-204ENST00000423567 DERL2Q9GZP9 239 aa10.45□□□□□ -0.74
USP49-204ENST00000423567 SLC25A18Q9H1K4 315 aa10.45□□□□□ -0.74
USP49-204ENST00000423567 CAB39LQ9H9S4 337 aa10.45□□□□□ -0.74
USP49-204ENST00000423567 TLK1Q9UKI8 766 aa10.45□□□□□ -0.74
USP49-204ENST00000423567 NXT1Q9UKK6 140 aaKnown RBP10.45□□□□□ -0.74
USP49-204ENST00000423567 G3BP2Q9UN86 482 aaKnown RBP10.45□□□□□ -0.74
USP49-204ENST00000423567 CDC14AQ9UNH5 594 aa10.45□□□□□ -0.74
USP49-204ENST00000423567 OARD1Q9Y530 152 aa10.45□□□□□ -0.74
USP49-204ENST00000423567 KCNMB2Q9Y691 235 aa10.45□□□□□ -0.74
USP49-204ENST00000423567 NBEAQ8NFP9 2946 aa10.45□□□□□ -0.74
USP49-204ENST00000423567 MKRN2OSH3BPM6 223 aa10.44□□□□□ -0.74
USP49-204ENST00000423567 PEX12O00623 359 aa10.44□□□□□ -0.74
USP49-204ENST00000423567 IGHEP01854 428 aa10.44□□□□□ -0.74
USP49-204ENST00000423567 ALBP02768 609 aa10.44□□□□□ -0.74
USP49-204ENST00000423567 S100BP04271 92 aaPredicted RBP10.44□□□□□ -0.74
USP49-204ENST00000423567 FURINP09958 794 aa10.44□□□□□ -0.74
USP49-204ENST00000423567 CCDC166P0CW27 439 aa10.44□□□□□ -0.74
USP49-204ENST00000423567 CDH1P12830 882 aa10.44□□□□□ -0.74
USP49-204ENST00000423567 ITGAXP20702 1163 aa10.44□□□□□ -0.74
USP49-204ENST00000423567 CRABP2P29373 138 aa10.44□□□□□ -0.74
USP49-204ENST00000423567 OTX2P32243 289 aa10.44□□□□□ -0.74
USP49-204ENST00000423567 PMS2P54278 862 aa10.44□□□□□ -0.74
USP49-204ENST00000423567 RRADP55042 308 aa10.44□□□□□ -0.74
USP49-204ENST00000423567 NFKB2Q00653 900 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms