RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 ZBTB26Q9HCK0 441 aa16.84■□□□□ 0.29
LINC00271-201ENST00000421378 FAM60AQ9NP50 221 aa16.84■□□□□ 0.29
LINC00271-201ENST00000421378 SEMA4BQ9NPR2 832 aaPredicted RBP16.84■□□□□ 0.29
LINC00271-201ENST00000421378 PTPRBP23467 1997 aa16.83■□□□□ 0.29
LINC00271-201ENST00000421378 HEATR5BQ9P2D3 2071 aa16.83■□□□□ 0.29
LINC00271-201ENST00000421378 BIRC5O15392 142 aa16.83■□□□□ 0.28
LINC00271-201ENST00000421378 EBLN1P0CF75 366 aa16.83■□□□□ 0.28
LINC00271-201ENST00000421378 GRK3P35626 688 aa16.83■□□□□ 0.28
LINC00271-201ENST00000421378 ARL1P40616 181 aaPredicted RBP16.83■□□□□ 0.28
LINC00271-201ENST00000421378 CDH13P55290 713 aa16.83■□□□□ 0.28
LINC00271-201ENST00000421378 PPP2R2AP63151 447 aa16.83■□□□□ 0.28
LINC00271-201ENST00000421378 CSNK1G2P78368 415 aa16.83■□□□□ 0.28
LINC00271-201ENST00000421378 IRF8Q02556 426 aa16.83■□□□□ 0.28
LINC00271-201ENST00000421378 CLCQ05315 142 aa16.83■□□□□ 0.28
LINC00271-201ENST00000421378 CHIT1Q13231 466 aa16.83■□□□□ 0.28
LINC00271-201ENST00000421378 XKR6Q5GH73 641 aa16.83■□□□□ 0.28
LINC00271-201ENST00000421378 ATG9BQ674R7 924 aa16.83■□□□□ 0.28
LINC00271-201ENST00000421378 SLCO4C1Q6ZQN7 724 aa16.83■□□□□ 0.28
LINC00271-201ENST00000421378 RAB11FIP2Q7L804 512 aa16.83■□□□□ 0.28
LINC00271-201ENST00000421378 DGLUCYQ7Z3D6 616 aa16.83■□□□□ 0.28
LINC00271-201ENST00000421378 NUDCD3Q8IVD9 361 aa16.83■□□□□ 0.28
LINC00271-201ENST00000421378 OR4K1Q8NGD4 311 aa16.83■□□□□ 0.28
LINC00271-201ENST00000421378 ATP6V1E2Q96A05 226 aa16.83■□□□□ 0.28
LINC00271-201ENST00000421378 MOCOSQ96EN8 888 aa16.83■□□□□ 0.28
LINC00271-201ENST00000421378 NOL11Q9H8H0 719 aaKnown RBP16.83■□□□□ 0.28
LINC00271-201ENST00000421378 LOXL2Q9Y4K0 774 aa16.83■□□□□ 0.28
LINC00271-201ENST00000421378 CCDC187A0A096LP49 1063 aa16.82■□□□□ 0.28
LINC00271-201ENST00000421378 WDR91A4D1P6 747 aa16.82■□□□□ 0.28
LINC00271-201ENST00000421378 HAT1O14929 419 aa16.82■□□□□ 0.28
LINC00271-201ENST00000421378 CTSVO60911 334 aa16.82■□□□□ 0.28
LINC00271-201ENST00000421378 MSL3P1P0C860 447 aa16.82■□□□□ 0.28
LINC00271-201ENST00000421378 C1GALT1C1LP0DN25 315 aa16.82■□□□□ 0.28
LINC00271-201ENST00000421378 NR1D1P20393 614 aa16.82■□□□□ 0.28
LINC00271-201ENST00000421378 VARSP26640 1264 aaKnown RBP16.82■□□□□ 0.28
LINC00271-201ENST00000421378 CCNG1P51959 295 aa16.82■□□□□ 0.28
LINC00271-201ENST00000421378 WDR4P57081 412 aaKnown RBP16.82■□□□□ 0.28
LINC00271-201ENST00000421378 SH3BP2P78314 561 aa16.82■□□□□ 0.28
LINC00271-201ENST00000421378 MEF2AQ02078 507 aaPredicted RBP16.82■□□□□ 0.28
LINC00271-201ENST00000421378 RBBP7Q16576 425 aa16.82■□□□□ 0.28
LINC00271-201ENST00000421378 DEFB110Q30KQ9 67 aa16.82■□□□□ 0.28
LINC00271-201ENST00000421378 RNF44Q7L0R7 432 aa16.82■□□□□ 0.28
LINC00271-201ENST00000421378 OR52B6Q8NGF0 335 aa16.82■□□□□ 0.28
LINC00271-201ENST00000421378 TRPC4APQ8TEL6 797 aa16.82■□□□□ 0.28
LINC00271-201ENST00000421378 PTCD3Q96EY7 689 aaKnown RBP16.82■□□□□ 0.28
LINC00271-201ENST00000421378 ZFYVE21Q9BQ24 234 aa16.82■□□□□ 0.28
LINC00271-201ENST00000421378 AIF1LQ9BQI0 150 aa16.82■□□□□ 0.28
LINC00271-201ENST00000421378 GSTO2Q9H4Y5 243 aa16.82■□□□□ 0.28
LINC00271-201ENST00000421378 ACTR8Q9H981 624 aa16.82■□□□□ 0.28
LINC00271-201ENST00000421378 SIDT1Q9NXL6 827 aaKnown RBP16.82■□□□□ 0.28
LINC00271-201ENST00000421378 EFCAB7A8K855 629 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 OR7A17O14581 309 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 HYAL3O43820 417 aaPredicted RBP16.81■□□□□ 0.28
LINC00271-201ENST00000421378 UGDHO60701 494 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 PRAMEF4O60810 478 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 WFS1O76024 890 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 MLYCDO95822 493 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 OTCP00480 354 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 FOLR1P15328 257 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 TSPAN8P19075 237 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 CXCR2P25025 360 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 RELAQ04206 551 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 PCDH1Q08174 1060 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 FOXC1Q12948 553 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 LCP2Q13094 533 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 TUBB3Q13509 450 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 DOC2AQ14183 400 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 TBCCQ15814 346 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 ZC3H12BQ5HYM0 836 aaKnown RBP16.81■□□□□ 0.28
LINC00271-201ENST00000421378 PRAMEF9Q5VWM5 478 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 ZCCHC23Q6ZST2 131 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 FRMD7Q6ZUT3 714 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 MYLK4Q86YV6 388 aaPredicted RBP16.81■□□□□ 0.28
LINC00271-201ENST00000421378 MDM1Q8TC05 714 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 N4BP2L2Q92802 583 aaPredicted RBP16.81■□□□□ 0.28
LINC00271-201ENST00000421378 WDR34Q96EX3 536 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 FCRL4Q96PJ5 515 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 EFCAB11Q9BUY7 163 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 GATA5Q9BWX5 397 aaPredicted RBP16.81■□□□□ 0.28
LINC00271-201ENST00000421378 SPNS1Q9H2V7 528 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 FANCEQ9HB96 536 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 GEMIN8Q9NWZ8 242 aaKnown RBP16.81■□□□□ 0.28
LINC00271-201ENST00000421378 OCIAD1Q9NX40 245 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 PILRAQ9UKJ1 303 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 A0A0J9YVX5 310 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 FEZF1A0PJY2 475 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 H3BQF6 201 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 PLD2O14939 933 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 JMJD7P0C870 316 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 FGF3P11487 239 aaPredicted RBP16.81■□□□□ 0.28
LINC00271-201ENST00000421378 NEFHP12036 1026 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 HGFP14210 728 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 RPS15AP62244 130 aaKnown RBP16.81■□□□□ 0.28
LINC00271-201ENST00000421378 REEP5Q00765 189 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 ACY1Q03154 408 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 FOXM1Q08050 763 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 CYP4F3Q08477 520 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 TRAF3Q13114 568 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 E2F2Q14209 437 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 SLBPQ14493 270 aaKnown RBP eCLIP16.81■□□□□ 0.28
LINC00271-201ENST00000421378 GPR19Q15760 415 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms