RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 IFT20Q8IY31 132 aa17.22■□□□□ 0.35
VCP-202ENST00000417448 CD200R1Q8TD46 325 aa17.22■□□□□ 0.35
VCP-202ENST00000417448 TRAPPC9Q96Q05 1148 aa17.22■□□□□ 0.35
VCP-202ENST00000417448 FMO2Q99518 471 aa17.22■□□□□ 0.35
VCP-202ENST00000417448 SLX1AQ9BQ83 275 aa17.22■□□□□ 0.35
VCP-202ENST00000417448 MVB12BQ9H7P6 319 aa17.22■□□□□ 0.35
VCP-202ENST00000417448 MTRF1LQ9UGC7 380 aaKnown RBP17.22■□□□□ 0.35
VCP-202ENST00000417448 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.22■□□□□ 0.354e-6■■■□□ 16
VCP-202ENST00000417448 MTO1Q9Y2Z2 717 aaKnown RBP17.22■□□□□ 0.35
VCP-202ENST00000417448 DHRS7Q9Y394 339 aa17.22■□□□□ 0.35
VCP-202ENST00000417448 V9GYY5 206 aaPredicted RBP17.22■□□□□ 0.35
VCP-202ENST00000417448 DNHD1Q96M86 4753 aa17.22■□□□□ 0.35
VCP-202ENST00000417448 SPG11Q96JI7 2443 aa17.21■□□□□ 0.35
VCP-202ENST00000417448 SLC9B1P1A6NJY1 282 aa17.21■□□□□ 0.35
VCP-202ENST00000417448 FAM159BA6NKW6 160 aa17.21■□□□□ 0.35
VCP-202ENST00000417448 TMEM150CB9EJG8 249 aa17.21■□□□□ 0.35
VCP-202ENST00000417448 KPNA5O15131 536 aa17.21■□□□□ 0.35
VCP-202ENST00000417448 VPS26AO75436 327 aa17.21■□□□□ 0.35
VCP-202ENST00000417448 SOX8P57073 446 aa17.21■□□□□ 0.35
VCP-202ENST00000417448 PLOD1Q02809 727 aaPredicted RBP17.21■□□□□ 0.35
VCP-202ENST00000417448 GRB7Q14451 532 aa17.21■□□□□ 0.35
VCP-202ENST00000417448 ZNF460Q14592 562 aa17.21■□□□□ 0.35
VCP-202ENST00000417448 SPNS3Q6ZMD2 512 aa17.21■□□□□ 0.35
VCP-202ENST00000417448 PIWIL4Q7Z3Z4 852 aaKnown RBP17.21■□□□□ 0.35
VCP-202ENST00000417448 TAX1BP1Q86VP1 789 aa17.21■□□□□ 0.35
VCP-202ENST00000417448 ZC3HC1Q86WB0 502 aaKnown RBP17.21■□□□□ 0.35
VCP-202ENST00000417448 OOSP2Q86WS3 158 aa17.21■□□□□ 0.35
VCP-202ENST00000417448 ZNF295-AS1Q8N0V1 137 aa17.21■□□□□ 0.35
VCP-202ENST00000417448 PPM1NQ8N819 430 aa17.21■□□□□ 0.35
VCP-202ENST00000417448 OR5K2Q8NHB8 316 aa17.21■□□□□ 0.35
VCP-202ENST00000417448 GABPB2Q8TAK5 448 aaPredicted RBP17.21■□□□□ 0.35
VCP-202ENST00000417448 EEF1AKMT1Q8WVE0 214 aa17.21■□□□□ 0.35
VCP-202ENST00000417448 IP6K3Q96PC2 410 aa17.21■□□□□ 0.35
VCP-202ENST00000417448 CDC42EP4Q9H3Q1 356 aaKnown RBP17.21■□□□□ 0.35
VCP-202ENST00000417448 SRMSQ9H3Y6 488 aa17.21■□□□□ 0.35
VCP-202ENST00000417448 FANCEQ9HB96 536 aa17.21■□□□□ 0.35
VCP-202ENST00000417448 P4HTMQ9NXG6 502 aa17.21■□□□□ 0.35
VCP-202ENST00000417448 TRMT6Q9UJA5 497 aaKnown RBP17.21■□□□□ 0.35
VCP-202ENST00000417448 PADI2Q9Y2J8 665 aa17.21■□□□□ 0.35
VCP-202ENST00000417448 ZNF469Q96JG9 3925 aaPredicted RBP17.2■□□□□ 0.34
VCP-202ENST00000417448 C9J4A7 227 aa17.2■□□□□ 0.34
VCP-202ENST00000417448 BTN3A1O00481 513 aa17.2■□□□□ 0.34
VCP-202ENST00000417448 C1orf105O95561 183 aa17.2■□□□□ 0.34
VCP-202ENST00000417448 ACSL3O95573 720 aa17.2■□□□□ 0.34
VCP-202ENST00000417448 MYBL2P10244 700 aa17.2■□□□□ 0.34
VCP-202ENST00000417448 CYP2A7P20853 494 aa17.2■□□□□ 0.34
VCP-202ENST00000417448 NDUFS1P28331 727 aa17.2■□□□□ 0.34
VCP-202ENST00000417448 GMPRP36959 345 aa17.2■□□□□ 0.34
VCP-202ENST00000417448 TSFMP43897 325 aaKnown RBP17.2■□□□□ 0.34
VCP-202ENST00000417448 KRTAP10-9P60411 292 aa17.2■□□□□ 0.34
VCP-202ENST00000417448 SSPNQ14714 243 aa17.2■□□□□ 0.34
VCP-202ENST00000417448 CYHR1Q6ZMK1 362 aa17.2■□□□□ 0.34
VCP-202ENST00000417448 PPP1R32Q7Z5V6 425 aa17.2■□□□□ 0.34
VCP-202ENST00000417448 FAM20CQ8IXL6 584 aa17.2■□□□□ 0.34
VCP-202ENST00000417448 TBC1D21Q8IYX1 336 aa17.2■□□□□ 0.34
VCP-202ENST00000417448 CARFQ8N187 725 aa17.2■□□□□ 0.34
VCP-202ENST00000417448 PPP4R1Q8TF05 950 aa17.2■□□□□ 0.34
VCP-202ENST00000417448 KCNJ9Q92806 393 aa17.2■□□□□ 0.34
VCP-202ENST00000417448 RELTQ969Z4 430 aa17.2■□□□□ 0.34
VCP-202ENST00000417448 KLHL25Q9H0H3 589 aa17.2■□□□□ 0.34
VCP-202ENST00000417448 CAB39LQ9H9S4 337 aa17.2■□□□□ 0.34
VCP-202ENST00000417448 SPHK1Q9NYA1 384 aa17.2■□□□□ 0.34
VCP-202ENST00000417448 VWA7Q9Y334 891 aa17.2■□□□□ 0.34
VCP-202ENST00000417448 ANKHD1Q8IWZ3 2542 aaKnown RBP17.19■□□□□ 0.34
VCP-202ENST00000417448 FBN3Q75N90 2809 aa17.19■□□□□ 0.34
VCP-202ENST00000417448 FAM95CA0A1B0GW59 222 aa17.19■□□□□ 0.34
VCP-202ENST00000417448 GSAPA4D1B5 854 aa17.19■□□□□ 0.34
VCP-202ENST00000417448 CNOT3O75175 753 aaKnown RBP17.19■□□□□ 0.34
VCP-202ENST00000417448 TAS2R39P59534 338 aa17.19■□□□□ 0.34
VCP-202ENST00000417448 TMEM207Q6UWW9 146 aa17.19■□□□□ 0.34
VCP-202ENST00000417448 TRIM73Q86UV7 250 aa17.19■□□□□ 0.34
VCP-202ENST00000417448 AMIGO1Q86WK6 493 aa17.19■□□□□ 0.34
VCP-202ENST00000417448 CEP97Q8IW35 865 aa17.19■□□□□ 0.34
VCP-202ENST00000417448 ADGRF3Q8IZF5 1079 aa17.19■□□□□ 0.34
VCP-202ENST00000417448 ZFPM2Q8WW38 1151 aa17.19■□□□□ 0.34
VCP-202ENST00000417448 DPH2Q9BQC3 489 aaPredicted RBP17.19■□□□□ 0.34
VCP-202ENST00000417448 DHRS4Q9BTZ2 278 aa17.19■□□□□ 0.34
VCP-202ENST00000417448 PHACTR1Q9C0D0 580 aa17.19■□□□□ 0.34
VCP-202ENST00000417448 TFB2MQ9H5Q4 396 aaKnown RBP17.19■□□□□ 0.34
VCP-202ENST00000417448 PTRH2Q9Y3E5 179 aaKnown RBP17.19■□□□□ 0.34
VCP-202ENST00000417448 COMMD10Q9Y6G5 202 aa17.19■□□□□ 0.34
VCP-202ENST00000417448 HEATR5BQ9P2D3 2071 aa17.18■□□□□ 0.34
VCP-202ENST00000417448 ARHGEF33A8MVX0 844 aa17.18■□□□□ 0.34
VCP-202ENST00000417448 PEX12O00623 359 aa17.18■□□□□ 0.34
VCP-202ENST00000417448 ZNF749O43361 778 aa17.18■□□□□ 0.34
VCP-202ENST00000417448 KLHL41O60662 606 aa17.18■□□□□ 0.34
VCP-202ENST00000417448 ALOX12BO75342 701 aa17.18■□□□□ 0.34
VCP-202ENST00000417448 MATN4O95460 622 aa17.18■□□□□ 0.34
VCP-202ENST00000417448 GSTA2P09210 222 aa17.18■□□□□ 0.34
VCP-202ENST00000417448 PVRP15151 417 aa17.18■□□□□ 0.34
VCP-202ENST00000417448 FDXRP22570 491 aa17.18■□□□□ 0.34
VCP-202ENST00000417448 HTR1EP28566 365 aa17.18■□□□□ 0.34
VCP-202ENST00000417448 CDC16Q13042 620 aa17.18■□□□□ 0.34
VCP-202ENST00000417448 ZNF630Q2M218 657 aaPredicted RBP17.18■□□□□ 0.34
VCP-202ENST00000417448 ARMC6Q6NXE6 501 aa17.18■□□□□ 0.34
VCP-202ENST00000417448 IGFL2Q6UWQ7 119 aa17.18■□□□□ 0.34
VCP-202ENST00000417448 UNC5DQ6UXZ4 953 aa17.18■□□□□ 0.34
VCP-202ENST00000417448 GALNT7Q86SF2 657 aa17.18■□□□□ 0.34
VCP-202ENST00000417448 SLC26A11Q86WA9 606 aa17.18■□□□□ 0.34
VCP-202ENST00000417448 PARP9Q8IXQ6 854 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms