RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 HS3ST2Q9Y278 367 aa4.48□□□□□ -1.69
PTPRK-210ENST00000415055 CSPG4Q6UVK1 2322 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 DOCK10Q96BY6 2186 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 LOC105369274A0A096LPK9 316 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 LOC102723532A0A0G2JNH3 316 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 GAGE10A6NGK3 116 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 C16orf96A6NNT2 1141 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 TMEM110-MUSTN1A8MSY1 372 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 KCNU1A8MYU2 1149 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 PRSS44E7EML9 344 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 PSMD9O00233 223 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 TSPAN4O14817 238 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 CTIFO43310 598 aaKnown RBP4.47□□□□□ -1.69
PTPRK-210ENST00000415055 B4GAT1O43505 415 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 NUDT21O43809 227 aaKnown RBP4.47□□□□□ -1.69
PTPRK-210ENST00000415055 FAM20BO75063 409 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 LRCH4O75427 683 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 CLDN11O75508 207 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 STK17BO94768 372 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 WDR47O94967 919 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 SCAF4O95104 1147 aaKnown RBP4.47□□□□□ -1.69
PTPRK-210ENST00000415055 TRUB2O95900 331 aaKnown RBP4.47□□□□□ -1.69
PTPRK-210ENST00000415055 ONECUT2O95948 504 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 PCCBP05166 539 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 UGT2B4P06133 528 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 CASP14P31944 242 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 GKP32189 559 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 HTR7P34969 479 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 STAT1P42224 750 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 PCP4P48539 62 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 POLD2P49005 469 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 CCL11P51671 97 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 CCNHP51946 323 aaPredicted RBP4.47□□□□□ -1.69
PTPRK-210ENST00000415055 PMS2P54278 862 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 YWHAEP62258 255 aaKnown RBP4.47□□□□□ -1.69
PTPRK-210ENST00000415055 HSD11B2P80365 405 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 B4GALNT1Q00973 533 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 FHL3Q13643 280 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 CBFBQ13951 182 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 SEC23BQ15437 767 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 SPDYE7PQ495Y7 208 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 PDCD4Q53EL6 469 aaKnown RBP4.47□□□□□ -1.69
PTPRK-210ENST00000415055 CARD16Q5EG05 197 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 C1orf220Q5T0J3 134 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 SYPL2Q5VXT5 272 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 CCDC144NLQ6NUI1 221 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 FBXL22Q6P050 247 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 CEACAM20Q6UY09 585 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 TFAP2DQ7Z6R9 452 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 TMEM135Q86UB9 458 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 ZSCAN30Q86W11 494 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 OR4N4Q8N0Y3 316 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 NFKBIDQ8NI38 313 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 KIAA1524Q8TCG1 905 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 RAB7BQ96AH8 199 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 CENPTQ96BT3 561 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 FAM136AQ96C01 138 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 ARHGEF26Q96DR7 871 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 RTP4Q96DX8 246 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 ALG14Q96F25 216 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 PDXPQ96GD0 296 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 REXO5Q96IC2 774 aaKnown RBP4.47□□□□□ -1.69
PTPRK-210ENST00000415055 VPS50Q96JG6 964 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 TEFMQ96QE5 360 aaKnown RBP4.47□□□□□ -1.69
PTPRK-210ENST00000415055 APOOQ9BUR5 198 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 SLC25A23Q9BV35 468 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 CCDC134Q9H6E4 229 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 SYNPO2LQ9H987 977 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 MRPL40Q9NQ50 206 aaKnown RBP4.47□□□□□ -1.69
PTPRK-210ENST00000415055 SMYD2Q9NRG4 433 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 EXOC1Q9NV70 894 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 DDIT4Q9NX09 232 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 TAS2R10Q9NYW0 307 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 RCOR3Q9P2K3 495 aaPredicted RBP4.47□□□□□ -1.69
PTPRK-210ENST00000415055 RIMKLBQ9ULI2 386 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 SH2B3Q9UQQ2 575 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 OR1A2Q9Y585 309 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 ANKRD12Q6UB98 2062 aa4.47□□□□□ -1.69
PTPRK-210ENST00000415055 INTS1Q8N201 2190 aaKnown RBP4.47□□□□□ -1.69
PTPRK-210ENST00000415055 NBEAL1Q6ZS30 2694 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 A0A0D9SEW6 157 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 ANKUB1A6NFN9 424 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 CACNB4O00305 520 aaPredicted RBP4.46□□□□□ -1.7
PTPRK-210ENST00000415055 O00370 1275 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 KRT86O43790 486 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 CALUO43852 315 aaPredicted RBP4.46□□□□□ -1.7
PTPRK-210ENST00000415055 CCNDBP1O95273 360 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 NADKO95544 446 aaPredicted RBP4.46□□□□□ -1.7
PTPRK-210ENST00000415055 F9P00740 461 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 CALCAP01258 141 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 FYNP06241 537 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 TMEM225BP0DP42 221 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 SLC2A3P11169 496 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 VDRP11473 427 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 BMP5P22003 454 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 F8A1P23610 371 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 NR2F2P24468 414 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 CCR1P32246 355 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 PAFAH1B1P43034 410 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 MXI1P50539 228 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms