RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 CCR10P46092 362 aa14.07□□□□□ -0.16
CHD1-202ENST00000414220 SERPINB8P50452 374 aa14.07□□□□□ -0.16
CHD1-202ENST00000414220 CCR8P51685 355 aa14.07□□□□□ -0.16
CHD1-202ENST00000414220 ARF3P61204 181 aaPredicted RBP14.07□□□□□ -0.16
CHD1-202ENST00000414220 ERV3-1Q14264 604 aa14.07□□□□□ -0.16
CHD1-202ENST00000414220 EFTUD2Q15029 972 aaKnown RBP eCLIP14.07□□□□□ -0.16
CHD1-202ENST00000414220 TGFBIQ15582 683 aa14.07□□□□□ -0.16
CHD1-202ENST00000414220 PPP1R3AQ16821 1122 aa14.07□□□□□ -0.16
CHD1-202ENST00000414220 PTCHD3Q3KNS1 767 aa14.07□□□□□ -0.16
CHD1-202ENST00000414220 GARNL3Q5VVW2 1013 aa14.07□□□□□ -0.16
CHD1-202ENST00000414220 PRMT9Q6P2P2 845 aa14.07□□□□□ -0.16
CHD1-202ENST00000414220 CSNK1A1LQ8N752 337 aa14.07□□□□□ -0.16
CHD1-202ENST00000414220 SLC44A1Q8WWI5 657 aa14.07□□□□□ -0.16
CHD1-202ENST00000414220 THAP4Q8WY91 577 aa14.07□□□□□ -0.16
CHD1-202ENST00000414220 KIAA1191Q96A73 305 aa14.07□□□□□ -0.16
CHD1-202ENST00000414220 CABS1Q96KC9 395 aa14.07□□□□□ -0.16
CHD1-202ENST00000414220 UBXN10Q96LJ8 280 aa14.07□□□□□ -0.16
CHD1-202ENST00000414220 ZNF285Q96NJ3 590 aa14.07□□□□□ -0.16
CHD1-202ENST00000414220 ACTL8Q9H568 366 aa14.07□□□□□ -0.16
CHD1-202ENST00000414220 CD274Q9NZQ7 290 aa14.07□□□□□ -0.16
CHD1-202ENST00000414220 DHCR7Q9UBM7 475 aaKnown RBP14.07□□□□□ -0.16
CHD1-202ENST00000414220 POLHQ9Y253 713 aa14.07□□□□□ -0.16
CHD1-202ENST00000414220 EXOC1LA0A1B0GW35 172 aa14.06□□□□□ -0.16
CHD1-202ENST00000414220 CDC14CA4D256 554 aa14.06□□□□□ -0.16
CHD1-202ENST00000414220 FITM1A5D6W6 292 aa14.06□□□□□ -0.16
CHD1-202ENST00000414220 H3BMH7 237 aa14.06□□□□□ -0.16
CHD1-202ENST00000414220 TK2O00142 265 aa14.06□□□□□ -0.16
CHD1-202ENST00000414220 HCRTR1O43613 425 aa14.06□□□□□ -0.16
CHD1-202ENST00000414220 ALBP02768 609 aa14.06□□□□□ -0.16
CHD1-202ENST00000414220 ABHD2P08910 425 aa14.06□□□□□ -0.16
CHD1-202ENST00000414220 NPPBP16860 134 aa14.06□□□□□ -0.16
CHD1-202ENST00000414220 WT1P19544 449 aaPredicted RBP14.06□□□□□ -0.16
CHD1-202ENST00000414220 F8A1P23610 371 aa14.06□□□□□ -0.16
CHD1-202ENST00000414220 CXCR2P25025 360 aa14.06□□□□□ -0.16
CHD1-202ENST00000414220 NCF4Q15080 339 aa14.06□□□□□ -0.16
CHD1-202ENST00000414220 NKAIN1Q4KMZ8 207 aa14.06□□□□□ -0.16
CHD1-202ENST00000414220 SULT1C3Q6IMI6 304 aa14.06□□□□□ -0.16
CHD1-202ENST00000414220 FRMPD2BQ6IN97 320 aa14.06□□□□□ -0.16
CHD1-202ENST00000414220 CMC1Q7Z7K0 106 aa14.06□□□□□ -0.16
CHD1-202ENST00000414220 THOC6Q86W42 341 aaKnown RBP14.06□□□□□ -0.16
CHD1-202ENST00000414220 SPNS2Q8IVW8 549 aa14.06□□□□□ -0.16
CHD1-202ENST00000414220 ENDOVQ8N8Q3 282 aaKnown RBP14.06□□□□□ -0.16
CHD1-202ENST00000414220 CAMKVQ8NCB2 501 aa14.06□□□□□ -0.16
CHD1-202ENST00000414220 SLC5A11Q8WWX8 675 aa14.06□□□□□ -0.16
CHD1-202ENST00000414220 PYCR2Q96C36 320 aa14.06□□□□□ -0.16
CHD1-202ENST00000414220 MVB12AQ96EY5 273 aa14.06□□□□□ -0.16
CHD1-202ENST00000414220 VPS50Q96JG6 964 aa14.06□□□□□ -0.16
CHD1-202ENST00000414220 GBP5Q96PP8 586 aa14.06□□□□□ -0.16
CHD1-202ENST00000414220 OR2A5Q96R48 311 aa14.06□□□□□ -0.16
CHD1-202ENST00000414220 PAFAH2Q99487 392 aa14.06□□□□□ -0.16
CHD1-202ENST00000414220 AKIRIN1Q9H9L7 192 aaPredicted RBP14.06□□□□□ -0.16
CHD1-202ENST00000414220 STARD5Q9NSY2 213 aa14.06□□□□□ -0.16
CHD1-202ENST00000414220 CUEDC1Q9NWM3 386 aaPredicted RBP14.06□□□□□ -0.16
CHD1-202ENST00000414220 WWOXQ9NZC7 414 aa14.06□□□□□ -0.16
CHD1-202ENST00000414220 MRPS18BQ9Y676 258 aaKnown RBP14.06□□□□□ -0.16
CHD1-202ENST00000414220 PKD1L2Q7Z442 2459 aa14.06□□□□□ -0.16
CHD1-202ENST00000414220 KCNE1BA0A087WTH5 132 aa14.05□□□□□ -0.16
CHD1-202ENST00000414220 A0A096LPK6 155 aa14.05□□□□□ -0.16
CHD1-202ENST00000414220 LOC105369274A0A096LPK9 316 aa14.05□□□□□ -0.16
CHD1-202ENST00000414220 IGKV1-8A0A0C4DH67 115 aa14.05□□□□□ -0.16
CHD1-202ENST00000414220 LOC102723532A0A0G2JNH3 316 aa14.05□□□□□ -0.16
CHD1-202ENST00000414220 NCF1BA6NI72 391 aaPredicted RBP14.05□□□□□ -0.16
CHD1-202ENST00000414220 NCF1CA8MVU1 366 aaPredicted RBP14.05□□□□□ -0.16
CHD1-202ENST00000414220 ESPNB1AK53 854 aa14.05□□□□□ -0.16
CHD1-202ENST00000414220 TERTO14746 1132 aaKnown RBP14.05□□□□□ -0.16
CHD1-202ENST00000414220 HAT1O14929 419 aa14.05□□□□□ -0.16
CHD1-202ENST00000414220 ATXN7O15265 892 aaPredicted RBP14.05□□□□□ -0.16
CHD1-202ENST00000414220 WDR47O94967 919 aa14.05□□□□□ -0.16
CHD1-202ENST00000414220 WISP3O95389 354 aaPredicted RBP14.05□□□□□ -0.16
CHD1-202ENST00000414220 C2P06681 752 aa14.05□□□□□ -0.16
CHD1-202ENST00000414220 SLC35E2BP0CK96 405 aa14.05□□□□□ -0.16
CHD1-202ENST00000414220 CDH1P12830 882 aa14.05□□□□□ -0.16
CHD1-202ENST00000414220 NCF1P14598 390 aaPredicted RBP14.05□□□□□ -0.16
CHD1-202ENST00000414220 GNAZP19086 355 aa14.05□□□□□ -0.16
CHD1-202ENST00000414220 ITGAXP20702 1163 aa14.05□□□□□ -0.16
CHD1-202ENST00000414220 FOLR3P41439 243 aa14.05□□□□□ -0.16
CHD1-202ENST00000414220 YBX1P67809 324 aaKnown RBP14.05□□□□□ -0.16
CHD1-202ENST00000414220 CYP4F2P78329 520 aa14.05□□□□□ -0.16
CHD1-202ENST00000414220 CSNK1G2P78368 415 aa14.05□□□□□ -0.16
CHD1-202ENST00000414220 OCA2Q04671 838 aa14.05□□□□□ -0.16
CHD1-202ENST00000414220 BMPR2Q13873 1038 aa14.05□□□□□ -0.16
CHD1-202ENST00000414220 ACAP2Q15057 778 aa14.05□□□□□ -0.16
CHD1-202ENST00000414220 RAB43Q86YS6 212 aa14.05□□□□□ -0.16
CHD1-202ENST00000414220 OR4N4Q8N0Y3 316 aa14.05□□□□□ -0.16
CHD1-202ENST00000414220 SPATA6LQ8N4H0 392 aa14.05□□□□□ -0.16
CHD1-202ENST00000414220 APOBEC4Q8WW27 367 aaKnown RBP14.05□□□□□ -0.16
CHD1-202ENST00000414220 COL26A1Q96A83 441 aa14.05□□□□□ -0.16
CHD1-202ENST00000414220 FKBP10Q96AY3 582 aa14.05□□□□□ -0.16
CHD1-202ENST00000414220 RHBDF1Q96CC6 855 aa14.05□□□□□ -0.16
CHD1-202ENST00000414220 IP6K3Q96PC2 410 aa14.05□□□□□ -0.16
CHD1-202ENST00000414220 AIF1LQ9BQI0 150 aa14.05□□□□□ -0.16
CHD1-202ENST00000414220 UNKQ9C0B0 810 aaKnown RBP14.05□□□□□ -0.16
CHD1-202ENST00000414220 PELI2Q9HAT8 420 aa14.05□□□□□ -0.16
CHD1-202ENST00000414220 ZNF304Q9HCX3 659 aa14.05□□□□□ -0.16
CHD1-202ENST00000414220 SNX15Q9NRS6 342 aa14.05□□□□□ -0.16
CHD1-202ENST00000414220 NUDT4Q9NZJ9 180 aa14.05□□□□□ -0.16
CHD1-202ENST00000414220 ZNF180Q9UJW8 692 aa14.05□□□□□ -0.16
CHD1-202ENST00000414220 NXT1Q9UKK6 140 aaKnown RBP14.05□□□□□ -0.16
CHD1-202ENST00000414220 TCFL5Q9UL49 500 aa14.05□□□□□ -0.16
CHD1-202ENST00000414220 SLC22A14Q9Y267 594 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms