RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 TUBGCP2Q9BSJ2 902 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 ALKBH7Q9BT30 221 aaPredicted RBP3.52□□□□□ -1.85
SF3B1-203ENST00000414174 HTATIP2Q9BUP3 242 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 ANKRD60Q9BZ19 345 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 DDX47Q9H0S4 455 aaKnown RBP3.52□□□□□ -1.85
SF3B1-203ENST00000414174 ALX4Q9H161 411 aaPredicted RBP3.52□□□□□ -1.85
SF3B1-203ENST00000414174 EPC1Q9H2F5 836 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 CDIP1Q9H305 208 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 SLC32A1Q9H598 525 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 C11orf49Q9H6J7 331 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 RIOX1Q9H6W3 641 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 CAB39LQ9H9S4 337 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 RPF1Q9H9Y2 349 aaKnown RBP3.52□□□□□ -1.85
SF3B1-203ENST00000414174 CSNK1G1Q9HCP0 422 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 MLXIPLQ9NP71 852 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 MYOZ1Q9NP98 299 aaPredicted RBP3.52□□□□□ -1.85
SF3B1-203ENST00000414174 PPANQ9NQ55 473 aaKnown RBP3.52□□□□□ -1.85
SF3B1-203ENST00000414174 ZCCHC3Q9NUD5 404 aaKnown RBP3.52□□□□□ -1.85
SF3B1-203ENST00000414174 PRMT7Q9NVM4 692 aaPredicted RBP3.52□□□□□ -1.85
SF3B1-203ENST00000414174 MS4A12Q9NXJ0 267 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 STMN3Q9NZ72 180 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 SEMA5BQ9P283 1151 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 NCDNQ9UBB6 729 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 SLC25A10Q9UBX3 287 aaPredicted RBP3.52□□□□□ -1.85
SF3B1-203ENST00000414174 UTS2RQ9UKP6 389 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 SARDHQ9UL12 918 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 DAPP1Q9UN19 280 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 WASF3Q9UPY6 502 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 ERVW-1Q9UQF0 538 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 HYOU1Q9Y4L1 999 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 CFAP20Q9Y6A4 193 aaKnown RBP3.52□□□□□ -1.85
SF3B1-203ENST00000414174 X6R8D5 127 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 RFX7Q2KHR2 1363 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 TNRQ92752 1358 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 PLEKHG1Q9ULL1 1385 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 SPATA31A1Q5TZJ5 1347 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 FAM240BA0A1B0GVZ2 78 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 A0A1W2PRB8 838 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 MGAT4DA6NG13 374 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 CBY3A6NI87 242 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 CD8B2A6NJW9 211 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 SAC3D1A6NKF1 404 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 A8MXQ7 604 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 TMEM238C9JI98 176 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 F8VP50 259 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 F8W036 122 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 H7C0C1 242 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 AGPSO00116 658 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 FBP2O00757 339 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 ZNF213O14771 459 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 GPAA1O43292 621 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 ADCY6O43306 1168 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 DCXO43602 365 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 KDELR3O43731 214 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 GLRA3O75311 464 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 BCAS1O75363 584 aaPredicted RBP3.51□□□□□ -1.85
SF3B1-203ENST00000414174 LRCH4O75427 683 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 VPS26AO75436 327 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 TAF5LO75529 589 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 CCNKO75909 580 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 SEC14L2O76054 403 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 KDM4BO94953 1096 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 SLCO2B1O94956 709 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 ZBTB7AO95365 584 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 BAG3O95817 575 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 TNNC2P02585 160 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 IFNA16P05015 189 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 ENO1P06733 434 aaKnown RBP3.51□□□□□ -1.85
SF3B1-203ENST00000414174 LYNP07948 512 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 CHRM2P08172 466 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 FAM58BPP0C7Q3 252 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 STAG3L1P0CL83 205 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 CYP2C8P10632 490 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 GFAPP14136 432 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 H2AFXP16104 143 aaPredicted RBP3.51□□□□□ -1.85
SF3B1-203ENST00000414174 ADRA2CP18825 462 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 ITIH1P19827 911 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 NR1D1P20393 614 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 HNF1AP20823 631 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 PON1P27169 355 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 CRABP1P29762 137 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 CASP14P31944 242 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 DCTDP32321 178 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 ARL1P40616 181 aaPredicted RBP3.51□□□□□ -1.85
SF3B1-203ENST00000414174 CASRP41180 1078 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 ECI1P42126 302 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 TMPOP42166 694 aaKnown RBP3.51□□□□□ -1.85
SF3B1-203ENST00000414174 STAT6P42226 847 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 CAPZBP47756 277 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 SLC6A11P48066 632 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 PPP3CCP48454 512 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 GSSP48637 474 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 HCAR3P49019 387 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 GMPSP49915 693 aaPredicted RBP3.51□□□□□ -1.85
SF3B1-203ENST00000414174 RASSF2P50749 326 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 RAB28P51157 221 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 BCAP31P51572 246 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 HK3P52790 923 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 PRKAG1P54619 331 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 BCAT1P54687 386 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms