RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 FAM110CQ1W6H9 321 aa14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 BCL7AQ4VC05 210 aa14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 MORN1Q5T089 497 aa14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 TMEM173Q86WV6 379 aaPredicted RBP14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 SLC5A8Q8N695 610 aa14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 VANGL1Q8TAA9 524 aaPredicted RBP14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 SH3GL1Q99961 368 aa14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 REEP1Q9H902 201 aa14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 RAPGEFL1Q9UHV5 662 aa14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 SLC22A14Q9Y267 594 aa14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 LAMP1P11279 417 aa14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 FPR1P21462 350 aa14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 MAGEA2P43356 314 aa14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 SMARCB1Q12824 385 aa14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 VMACQ2NL98 169 aa14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 NEK5Q6P3R8 708 aa14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 USP43Q70EL4 1123 aa14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 TSEN54Q7Z6J9 526 aaKnown RBP14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 OR8H2Q8N162 312 aa14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 ZNF675Q8TD23 568 aa14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 C8orf48Q96LL4 319 aa14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 ADGRE3Q9BY15 652 aa14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 PRRG3Q9BZD7 231 aa14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 MAGIXQ9H6Y5 334 aa14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 ADPRHL2Q9NX46 363 aa14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 OARD1Q9Y530 152 aa14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 DNMT3AQ9Y6K1 912 aaPredicted RBP14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 GRXCR2A6NFK2 248 aa14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 WDR47O94967 919 aa14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 CORO1AP31146 461 aaKnown RBP14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 PPP3CCP48454 512 aa14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 CACNG1Q06432 222 aa14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 ZNF177Q13360 481 aaPredicted RBP14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 PLEKHG6Q3KR16 790 aa14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 ARMCX4Q5H9R4 360 aa14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 ZNF852Q6ZMS4 543 aa14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 ANKS3Q6ZW76 656 aa14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 TRIM46Q7Z4K8 759 aa14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 FAM124AQ86V42 546 aa14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 SERINC5Q86VE9 423 aa14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 ZBTB2Q8N680 514 aa14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 GTPBP3Q969Y2 492 aaKnown RBP14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 MAGEH1Q9H213 219 aa14.13□□□□□ -0.15
SEMA3F-202ENST00000413852 WWP2O00308 870 aa14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 ERN1O75460 977 aaKnown RBP14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 CCNDBP1O95273 360 aa14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 CLDN9O95484 217 aa14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 TYMPP19971 482 aa14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 CLDN8P56748 225 aa14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 ABHD18Q0P651 414 aa14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 KEAP1Q14145 624 aa14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 UGT8Q16880 541 aa14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 RFX4Q33E94 735 aa14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 ZC3H12BQ5HYM0 836 aaKnown RBP14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 NECTIN4Q96NY8 510 aa14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 SDHCQ99643 169 aaPredicted RBP14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 TTYH2Q9BSA4 534 aa14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 RNF38Q9H0F5 515 aa14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 NMRK2Q9NPI5 230 aa14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 EHD3Q9NZN3 535 aa14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 CD84Q9UIB8 345 aa14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 MTMR11A4FU01 709 aa14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 LRRTM2O43300 516 aa14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 HOXB9P17482 250 aaPredicted RBP14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 ATF6P18850 670 aa14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 GRK3P35626 688 aa14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 RPIAP49247 311 aa14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 CLCN4P51793 760 aa14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 RHOAP61586 193 aa14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 IL18R1Q13478 541 aa14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 MED22Q15528 200 aa14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 ALG1LQ6GMV1 187 aa14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 THOC7Q6I9Y2 204 aaKnown RBP14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 BCDIN3DQ7Z5W3 292 aaKnown RBP14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 TSPYL5Q86VY4 417 aaPredicted RBP14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 BEND7Q8N7W2 519 aaPredicted RBP14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 TXNDC15Q96J42 360 aa14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 PCDH10Q9P2E7 1040 aa14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 CRLS1Q9UJA2 301 aa14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 SAMD4AQ9UPU9 718 aaKnown RBP14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 N6AMT1Q9Y5N5 214 aa14.12□□□□□ -0.15
SEMA3F-202ENST00000413852 EVPLLA8MZ36 301 aa14.11□□□□□ -0.15
SEMA3F-202ENST00000413852 WNT9AO14904 365 aa14.11□□□□□ -0.15
SEMA3F-202ENST00000413852 RGS5O15539 181 aa14.11□□□□□ -0.15
SEMA3F-202ENST00000413852 ZNF623O75123 536 aa14.11□□□□□ -0.15
SEMA3F-202ENST00000413852 OAZ2O95190 189 aa14.11□□□□□ -0.15
SEMA3F-202ENST00000413852 CKMT1AP12532 417 aa14.11□□□□□ -0.15
SEMA3F-202ENST00000413852 POU1F1P28069 291 aa14.11□□□□□ -0.15
SEMA3F-202ENST00000413852 DSC3Q14574 896 aa14.11□□□□□ -0.15
SEMA3F-202ENST00000413852 GANABQ14697 944 aaKnown RBP14.11□□□□□ -0.15
SEMA3F-202ENST00000413852 LRIF1Q5T3J3 769 aa14.11□□□□□ -0.15
SEMA3F-202ENST00000413852 NRARPQ7Z6K4 114 aa14.11□□□□□ -0.15
SEMA3F-202ENST00000413852 MINDY2Q8NBR6 621 aa14.11□□□□□ -0.15
SEMA3F-202ENST00000413852 GPR156Q8NFN8 814 aa14.11□□□□□ -0.15
SEMA3F-202ENST00000413852 COPS8Q99627 209 aa14.11□□□□□ -0.15
SEMA3F-202ENST00000413852 PCDHGB6Q9Y5F9 930 aa14.11□□□□□ -0.15
SEMA3F-202ENST00000413852 VCANP13611 3396 aa14.11□□□□□ -0.15
SEMA3F-202ENST00000413852 ANKRD34BA5PLL1 514 aa14.11□□□□□ -0.15
SEMA3F-202ENST00000413852 C2orf78A6NCI8 922 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms