RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 CRTC2Q53ET0 693 aaPredicted RBP13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 FAM76BQ5HYJ3 339 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 OR2T5Q6IEZ7 315 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 LINGO2Q7L985 606 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 TMEM17Q86X19 198 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 OR2T29Q8NH02 315 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 NLE1Q9NVX2 485 aaPredicted RBP13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 TVP23BQ9NYZ1 205 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 UBQLN2Q9UHD9 624 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 KDM3BQ7LBC6 1761 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 AGR2O95994 175 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 EBLN1P0CF75 366 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 PEPDP12955 493 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 CKMT2P17540 419 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 GSTM3P21266 225 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 CPN2P22792 545 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 GLDCP23378 1020 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 SLC6A4P31645 630 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 MAN2A2P49641 1150 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 EIF5AP63241 154 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 SLBPQ14493 270 aaKnown RBP eCLIP13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 ATAT1Q5SQI0 421 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 ZCCHC12Q6PEW1 402 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 AMIGO1Q86WK6 493 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 PHTF2Q8N3S3 785 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 TRIM43Q96BQ3 446 aaPredicted RBP13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 SLC35A5Q9BS91 424 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 CST11Q9H112 138 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 ZNF69Q9UC07 566 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 LRP6O75581 1613 aa13.38□□□□□ -0.27
SMARCA4-202ENST00000413806 E7ESA3 106 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 L7N2F9 121 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 CA12O43570 354 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 PRAMEF11O60813 436 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 ITGB1P05556 798 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 DLDP09622 509 aaKnown RBP13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 TFPIP10646 304 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 ATP1B2P14415 290 aaPredicted RBP13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 ACVRL1P37023 503 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 EMX2Q04743 252 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 NPTX1Q15818 432 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 ATCAYQ86WG3 371 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 OR2AP1Q8NGE2 309 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 CEP76Q8TAP6 659 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 SH3RF2Q8TEC5 729 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 TSPEARQ8WU66 669 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 ISOC1Q96CN7 298 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 PFDN5Q99471 154 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 TMEM246Q9BRR3 403 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 SRMSQ9H3Y6 488 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 TMEM9Q9P0T7 183 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 FGF3P11487 239 aaPredicted RBP13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 ERP29P30040 261 aaKnown RBP13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 PGDP52209 483 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 NCBP2P52298 156 aaKnown RBP eCLIP13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 JAG1P78504 1218 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 PCDH1Q08174 1060 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 CHRNA6Q15825 494 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 SFT2D3Q587I9 215 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 MS4A13Q5J8X5 152 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 C1orf74Q96LT6 269 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 RETREG1Q9H6L5 497 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 P2RX2Q9UBL9 471 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 PPIEQ9UNP9 301 aaKnown RBP13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 PHLPP1O60346 1717 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 ANKRD66B4E2M5 251 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 CRYZL1O95825 349 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 HMGCS1Q01581 520 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 PRKCZQ05513 592 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 ZNF678Q5SXM1 525 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 EMC10Q5UCC4 262 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 PIM3Q86V86 326 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 COX18Q8N8Q8 333 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 ZMIZ2Q8NF64 920 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 OR4F6Q8NGB9 312 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 STON2Q8WXE9 905 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 RNF31Q96EP0 1072 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 PCDHGB7Q9Y5F8 929 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 NRXN3Q9Y4C0 1643 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 FXYD6-FXYD2A0A087WZ82 144 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 A0A1W2PPW3 197 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 PRAMEF12O95522 483 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 EPOP01588 193 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 INHAP05111 366 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 ALPIP09923 528 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 WASP42768 502 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 C1QTNF8P60827 252 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 ZNF792Q3KQV3 632 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 GDF6Q6KF10 455 aaPredicted RBP13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 FRRS1Q6ZNA5 592 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 ASB18Q6ZVZ8 466 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 TAS1R3Q7RTX0 852 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 CAND1Q86VP6 1230 aaKnown RBP13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 IGDCC3Q8IVU1 814 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 LGI4Q8N135 537 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 SYNPOQ8N3V7 929 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 BRI3BPQ8WY22 251 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 RGMAQ96B86 450 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 FXYD6Q9H0Q3 95 aa13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 TBC1D17Q9HA65 648 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms