RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 ADGRF3Q8IZF5 1079 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 SDR16C5Q8N3Y7 309 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 RNF175Q8N4F7 328 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 FNDC5Q8NAU1 212 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 AVL9Q8NBF6 648 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 ZBTB44Q8NCP5 570 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 OR2L3Q8NG85 312 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 OR7G3Q8NG95 312 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 OR4E2Q8NGC2 313 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 OR2A1Q8NGT9 310 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 HUS1BQ8NHY5 278 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 FLVCR1-AS1Q8TAF5 88 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 UBE2E3Q969T4 207 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 MTFMTQ96DP5 389 aaKnown RBP6.4□□□□□ -1.38
VPS41-204ENST00000413141 PPP3R2Q96LZ3 170 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 MTERF1Q99551 399 aaKnown RBP6.4□□□□□ -1.38
VPS41-204ENST00000413141 ELF4Q99607 663 aaPredicted RBP6.4□□□□□ -1.38
VPS41-204ENST00000413141 BRINP2Q9C0B6 783 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 ACTR5Q9H9F9 607 aaPredicted RBP6.4□□□□□ -1.38
VPS41-204ENST00000413141 BRF2Q9HAW0 419 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 LRTM1Q9HBL6 345 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 SLC6A20Q9NP91 592 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 MRPS30Q9NP92 439 aaKnown RBP6.4□□□□□ -1.38
VPS41-204ENST00000413141 AIG1Q9NVV5 245 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 UCKL1Q9NWZ5 548 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 ZSCAN32Q9NX65 697 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 ASIC5Q9NY37 505 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 TAGLN3Q9UI15 199 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 DOLKQ9UPQ8 538 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 TSC22D4Q9Y3Q8 395 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 POLR3HQ9Y535 204 aaPredicted RBP6.4□□□□□ -1.38
VPS41-204ENST00000413141 PCDHGA11Q9Y5H2 935 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 ZDBF2Q9HCK1 2354 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 TMEM131Q92545 1883 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 PCDH15Q96QU1 1955 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 OR6C74A6NCV1 312 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 LILRA5A6NI73 299 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 MAGEB17A8MXT2 336 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 ISM1B1AKI9 464 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 H7BY64 318 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 PSMD12O00232 456 aaPredicted RBP6.39□□□□□ -1.39
VPS41-204ENST00000413141 FOXE1O00358 373 aaPredicted RBP6.39□□□□□ -1.39
VPS41-204ENST00000413141 NRP2O60462 931 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 HNRNPCL1O60812 293 aaKnown RBP6.39□□□□□ -1.39
VPS41-204ENST00000413141 ATP5HO75947 161 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 ETHE1O95571 254 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 ANXA6P08133 673 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 ESRRAP11474 423 aaPredicted RBP6.39□□□□□ -1.39
VPS41-204ENST00000413141 ACPPP15309 386 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 CD1EP15812 388 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 UGT2B7P16662 529 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 GPX3P22352 226 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 EPHA8P29322 1005 aaPredicted RBP6.39□□□□□ -1.39
VPS41-204ENST00000413141 CMPK1P30085 196 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 AVPR2P30518 371 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 SERPINB1P30740 379 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 PIK3CBP42338 1070 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 DPP6P42658 865 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 CPA2P48052 419 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 RXRGP48443 463 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 ARRB1P49407 418 aaPredicted RBP6.39□□□□□ -1.39
VPS41-204ENST00000413141 ACADVLP49748 655 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 DIO3P55073 304 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 CSNK1G2P78368 415 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 PHEXP78562 749 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 EMX2Q04743 252 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 GRIK2Q13002 908 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 MAD2L1Q13257 205 aaPredicted RBP6.39□□□□□ -1.39
VPS41-204ENST00000413141 KIAA0040Q15053 153 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 SHBQ15464 509 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 AP5B1Q2VPB7 878 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 C14orf28Q4W4Y0 310 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 RFTN2Q52LD8 501 aaPredicted RBP6.39□□□□□ -1.39
VPS41-204ENST00000413141 PDCD4Q53EL6 469 aaKnown RBP6.39□□□□□ -1.39
VPS41-204ENST00000413141 C6orf132Q5T0Z8 1188 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 ZNF425Q6IV72 752 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 TMIGD1Q6UXZ0 262 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 GK5Q6ZS86 529 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 TMEM26Q6ZUK4 368 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 VN1R5Q7Z5H4 357 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 RABEPKQ7Z6M1 372 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 SNX32Q86XE0 403 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 ZNF761Q86XN6 746 aaPredicted RBP6.39□□□□□ -1.39
VPS41-204ENST00000413141 FAM20CQ8IXL6 584 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 KRT78Q8N1N4 520 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 MIER2Q8N344 545 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 ARL14Q8N4G2 192 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 POU5F2Q8N7G0 328 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 KYQ8NBH2 561 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 ZNF740Q8NDX6 193 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 GPR156Q8NFN8 814 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 OR4K1Q8NGD4 311 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 OR9I1Q8NGQ6 314 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 OR10G6Q8NH81 332 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 PIGKQ92643 395 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 SLC22A18Q96BI1 424 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 SLC7A6OSQ96CW6 309 aaPredicted RBP6.39□□□□□ -1.39
VPS41-204ENST00000413141 CMTM5Q96DZ9 223 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 CMTM7Q96FZ5 175 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 APIPQ96GX9 242 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms