RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 KDM4EB2RXH2 506 aaPredicted RBP5.09□□□□□ -1.59
HERC4-205ENST00000412272 STX16O14662 325 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 ADAM12O43184 909 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 FRS3O43559 492 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 RAF1P04049 648 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 MPOP05164 745 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 ALPPP05187 535 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 ITGAVP06756 1048 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 IQCF3P0C7M6 154 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 SLC2A1P11166 492 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 CHRM3P20309 590 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 HNF1AP20823 631 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 SDHAP31040 664 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 CEACAM6P40199 344 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 MAP3K8P41279 467 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 OMPP47874 163 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 SERPINB10P48595 397 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 IDH3AP50213 366 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 SUCLG1P53597 346 aaKnown RBP5.09□□□□□ -1.59
HERC4-205ENST00000412272 SLC12A3P55017 1021 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 RAC3P60763 192 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 ECH1Q13011 328 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 COLEC12Q5KU26 742 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 SLC35D3Q5M8T2 416 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 BSPRYQ5W0U4 402 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 DPP8Q6V1X1 898 aaPredicted RBP5.09□□□□□ -1.59
HERC4-205ENST00000412272 NAPRTQ6XQN6 538 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 ZNF687Q8N1G0 1237 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 CMTR1Q8N1G2 835 aaKnown RBP5.09□□□□□ -1.59
HERC4-205ENST00000412272 OR14C36Q8NHC7 312 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 UBA3Q8TBC4 463 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 FAM111AQ96PZ2 611 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 SDHCQ99643 169 aaPredicted RBP5.09□□□□□ -1.59
HERC4-205ENST00000412272 PRRX2Q99811 253 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 WDR83Q9BRX9 315 aaKnown RBP5.09□□□□□ -1.59
HERC4-205ENST00000412272 SEMA4CQ9C0C4 833 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 PPIL3Q9H2H8 161 aaKnown RBP5.09□□□□□ -1.59
HERC4-205ENST00000412272 TDP1Q9NUW8 608 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 MCUBQ9NWR8 336 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 BARHL2Q9NY43 387 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 ARPP21Q9UBL0 812 aaPredicted RBP5.09□□□□□ -1.59
HERC4-205ENST00000412272 ADAMTS5Q9UNA0 930 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 SSR3Q9UNL2 185 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 MINPP1Q9UNW1 487 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 CDY2AQ9Y6F7 541 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 DENND4AQ7Z401 1863 aa5.09□□□□□ -1.6
HERC4-205ENST00000412272 MEGF6O75095 1541 aa5.09□□□□□ -1.6
HERC4-205ENST00000412272 PHYHO14832 338 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 LIASO43766 372 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 MITFO75030 526 aaPredicted RBP5.08□□□□□ -1.6
HERC4-205ENST00000412272 IFNA2P01563 188 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 C9P02748 559 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 TPOP07202 933 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 GUSBP08236 651 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 TGM2P21980 687 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 ME2P23368 584 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 ATP5F1P24539 256 aaPredicted RBP5.08□□□□□ -1.6
HERC4-205ENST00000412272 LTKP29376 864 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 ADORA1P30542 326 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 PTGFRP43088 359 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 BRCC3P46736 316 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 HTRA4P83105 476 aaPredicted RBP5.08□□□□□ -1.6
HERC4-205ENST00000412272 TNFRSF9Q07011 255 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 MERTKQ12866 999 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 DDX39BQ13838 428 aaKnown RBP5.08□□□□□ -1.6
HERC4-205ENST00000412272 EXOSC2Q13868 293 aaKnown RBP5.08□□□□□ -1.6
HERC4-205ENST00000412272 SLC9B1Q4ZJI4 515 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 ZNF385CQ66K41 422 aaPredicted RBP5.08□□□□□ -1.6
HERC4-205ENST00000412272 MBLAC2Q68D91 279 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 C8orf82Q6P1X6 216 aaPredicted RBP5.08□□□□□ -1.6
HERC4-205ENST00000412272 FDX2Q6P4F2 183 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 PAGE2Q7Z2X7 111 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 FAM131BQ86XD5 332 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 UNC5BQ8IZJ1 945 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 PRSS35Q8N3Z0 413 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 ZNF781Q8N8C0 355 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 OR10H5Q8NGA6 315 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 SLCO4A1Q96BD0 722 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 FAM84BQ96KN1 310 aaPredicted RBP5.08□□□□□ -1.6
HERC4-205ENST00000412272 SORCS2Q96PQ0 1159 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 NFKBIZQ9BYH8 718 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 MIXL1Q9H2W2 232 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 ASB8Q9H765 288 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 TAS2R14Q9NYV8 317 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 TAS2R10Q9NYW0 307 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 GCNT4Q9P109 453 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 DHCR7Q9UBM7 475 aaKnown RBP5.08□□□□□ -1.6
HERC4-205ENST00000412272 SERTM2A0A1B0GWG4 89 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 C5orf52A6NGY3 159 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 G3V2T6 193 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 MEIS1O00470 390 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 COPEO14579 308 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 DVL2O14641 736 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 PAPSS1O43252 624 aaPredicted RBP5.08□□□□□ -1.6
HERC4-205ENST00000412272 PAK4O96013 591 aaPredicted RBP5.08□□□□□ -1.6
HERC4-205ENST00000412272 CCNYL3P0C7X3 344 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 LINC00614P0C842 121 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 TRIM49P0CI25 452 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 TRIM49CP0CI26 452 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 JUNDP17535 347 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms