RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 NPAS2Q99743 824 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 PITHD1Q9GZP4 211 aaPredicted RBP5.32□□□□□ -1.56
EPHA4-202ENST00000409854 TMEM168Q9H0V1 697 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 NT5DC2Q9H857 520 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 MOSPD1Q9UJG1 213 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 EIF3LQ9Y262 564 aaKnown RBP5.32□□□□□ -1.56
EPHA4-202ENST00000409854 NDUFAF1Q9Y375 327 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 THADAQ6YHU6 1953 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 A0A1W2PP18 115 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 OR52A4PA6NMU1 304 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 AIM2O14862 343 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 EEDO75530 441 aaKnown RBP5.32□□□□□ -1.56
EPHA4-202ENST00000409854 RASGRP1O95267 797 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 TNFP01375 233 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 THEGLP0DJG4 465 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 F3P13726 295 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 SLC2A4P14672 509 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 AK4P27144 223 aaPredicted RBP5.32□□□□□ -1.56
EPHA4-202ENST00000409854 HOXA6P31267 233 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 DPP6P42658 865 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 NEK2P51955 445 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 MTTPP55157 894 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 C21orf58P58505 322 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 REEP5Q00765 189 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 PRKG2Q13237 762 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 TLR1Q15399 786 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 CCDC92Q53HC0 331 aaPredicted RBP5.32□□□□□ -1.56
EPHA4-202ENST00000409854 FBXW10Q5XX13 1052 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 NET1Q7Z628 596 aaPredicted RBP5.32□□□□□ -1.56
EPHA4-202ENST00000409854 OR52E1Q8NGJ3 308 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 CCL4L1Q8NHW4 92 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 SLC6A18Q96N87 628 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 NRTNQ99748 197 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 GPATCH1Q9BRR8 931 aaKnown RBP5.32□□□□□ -1.56
EPHA4-202ENST00000409854 THTPAQ9BU02 230 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 MRPL1Q9BYD6 325 aaKnown RBP5.32□□□□□ -1.56
EPHA4-202ENST00000409854 SPNS1Q9H2V7 528 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 RHBGQ9H310 441 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 DENND2DQ9H6A0 471 aaPredicted RBP5.32□□□□□ -1.56
EPHA4-202ENST00000409854 WDR41Q9HAD4 459 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 IMP3Q9NV31 184 aaKnown RBP5.32□□□□□ -1.56
EPHA4-202ENST00000409854 MAP10Q9P2G4 905 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 ZNF624Q9P2J8 865 aaPredicted RBP5.32□□□□□ -1.56
EPHA4-202ENST00000409854 SLC7A8Q9UHI5 535 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 PCDHGA7Q9Y5G6 932 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 GMEB1Q9Y692 573 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 SLCO1B1Q9Y6L6 691 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.32□□□□□ -1.56
EPHA4-202ENST00000409854 TDRD6O60522 2096 aaKnown RBP5.32□□□□□ -1.56
EPHA4-202ENST00000409854 CROCCQ5TZA2 2017 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 PDZK1P1A8MUH7 402 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 NR5A2O00482 541 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 MRASO14807 208 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 KDM1AO60341 852 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 SEC22BO75396 215 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 MTRF1O75570 445 aaKnown RBP5.31□□□□□ -1.56
EPHA4-202ENST00000409854 PRPS2P11908 318 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 BCKDHAP12694 445 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 CDH1P12830 882 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 MAPK1P28482 360 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 PIK3CBP42338 1070 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 POLR2JP52435 117 aaKnown RBP5.31□□□□□ -1.56
EPHA4-202ENST00000409854 FOXM1Q08050 763 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 TBL3Q12788 808 aaKnown RBP5.31□□□□□ -1.56
EPHA4-202ENST00000409854 SLBPQ14493 270 aaKnown RBP eCLIP5.31□□□□□ -1.56
EPHA4-202ENST00000409854 SGO1Q5FBB7 561 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 PIGGQ5H8A4 983 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 CACHD1Q5VU97 1274 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 CWF19L1Q69YN2 538 aaKnown RBP5.31□□□□□ -1.56
EPHA4-202ENST00000409854 SLC36A4Q6YBV0 504 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 FAM9CQ8IZT9 166 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 LIX1Q8N485 282 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 MFSD2AQ8NA29 543 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 GLB1L3Q8NCI6 653 aaPredicted RBP5.31□□□□□ -1.56
EPHA4-202ENST00000409854 OR2A1Q8NGT9 310 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 HUS1BQ8NHY5 278 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 C1orf216Q8TAB5 229 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 ZFPM2Q8WW38 1151 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 UBE2E3Q969T4 207 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 MTFMTQ96DP5 389 aaKnown RBP5.31□□□□□ -1.56
EPHA4-202ENST00000409854 SPDL1Q96EA4 605 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 APIPQ96GX9 242 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 CLPTM1LQ96KA5 538 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 TMEM74Q96NL1 305 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 CLMPQ9H6B4 373 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 DMRT3Q9NQL9 472 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 VPS29Q9UBQ0 182 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 TAC3Q9UHF0 121 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 MUTYHQ9UIF7 546 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 KLF15Q9UIH9 416 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 DLGAP4Q9Y2H0 992 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 SIT1Q9Y3P8 196 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 COLEC10Q9Y6Z7 277 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 MAGEB17A8MXT2 336 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 FXYD1O00168 92 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 NDUFS2O75306 463 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 ETHE1O95571 254 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 ATP6V1G2O95670 118 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 WNT1P04628 370 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 SDC1P18827 310 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms