RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 PTCHD3Q3KNS1 767 aa10.44□□□□□ -0.74
CHMP3-205ENST00000409810 FAM153CQ494X1 144 aa10.44□□□□□ -0.74
CHMP3-205ENST00000409810 CRTC2Q53ET0 693 aaPredicted RBP10.44□□□□□ -0.74
CHMP3-205ENST00000409810 UBAP2Q5T6F2 1119 aaKnown RBP10.44□□□□□ -0.74
CHMP3-205ENST00000409810 SULT1C3Q6IMI6 304 aa10.44□□□□□ -0.74
CHMP3-205ENST00000409810 ZNF517Q6ZMY9 492 aaPredicted RBP10.44□□□□□ -0.74
CHMP3-205ENST00000409810 SPATA6LQ8N4H0 392 aa10.44□□□□□ -0.74
CHMP3-205ENST00000409810 PDPRQ8NCN5 879 aa10.44□□□□□ -0.74
CHMP3-205ENST00000409810 CT55Q8WUE5 264 aa10.44□□□□□ -0.74
CHMP3-205ENST00000409810 UBLCP1Q8WVY7 318 aaPredicted RBP10.44□□□□□ -0.74
CHMP3-205ENST00000409810 SLC5A11Q8WWX8 675 aa10.44□□□□□ -0.74
CHMP3-205ENST00000409810 STARD8Q92502 1023 aa10.44□□□□□ -0.74
CHMP3-205ENST00000409810 ISL2Q96A47 359 aa10.44□□□□□ -0.74
CHMP3-205ENST00000409810 PYCR2Q96C36 320 aa10.44□□□□□ -0.74
CHMP3-205ENST00000409810 RHBDF1Q96CC6 855 aa10.44□□□□□ -0.74
CHMP3-205ENST00000409810 MTBPQ96DY7 904 aa10.44□□□□□ -0.74
CHMP3-205ENST00000409810 THAP11Q96EK4 314 aa10.44□□□□□ -0.74
CHMP3-205ENST00000409810 CABS1Q96KC9 395 aa10.44□□□□□ -0.74
CHMP3-205ENST00000409810 PRAP1Q96NZ9 151 aa10.44□□□□□ -0.74
CHMP3-205ENST00000409810 VPS11Q9H270 941 aa10.44□□□□□ -0.74
CHMP3-205ENST00000409810 ANKZF1Q9H8Y5 726 aa10.44□□□□□ -0.74
CHMP3-205ENST00000409810 PPCSQ9HAB8 311 aa10.44□□□□□ -0.74
CHMP3-205ENST00000409810 CUTCQ9NTM9 273 aa10.44□□□□□ -0.74
CHMP3-205ENST00000409810 CUEDC1Q9NWM3 386 aaPredicted RBP10.44□□□□□ -0.74
CHMP3-205ENST00000409810 NUDT4Q9NZJ9 180 aa10.44□□□□□ -0.74
CHMP3-205ENST00000409810 CD274Q9NZQ7 290 aa10.44□□□□□ -0.74
CHMP3-205ENST00000409810 GPN3Q9UHW5 284 aaPredicted RBP10.44□□□□□ -0.74
CHMP3-205ENST00000409810 PADI2Q9Y2J8 665 aa10.44□□□□□ -0.74
CHMP3-205ENST00000409810 PCDHGA6Q9Y5G7 932 aa10.44□□□□□ -0.74
CHMP3-205ENST00000409810 KCNE2Q9Y6J6 123 aa10.44□□□□□ -0.74
CHMP3-205ENST00000409810 LOC400499M0QZD8 3231 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 HMX2A2RU54 273 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 FITM1A5D6W6 292 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 NCF1BA6NI72 391 aaPredicted RBP10.43□□□□□ -0.74
CHMP3-205ENST00000409810 NCF1CA8MVU1 366 aaPredicted RBP10.43□□□□□ -0.74
CHMP3-205ENST00000409810 TRIM49D1C9J1S8 452 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 H0YGG7 62 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 HAT1O14929 419 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 DSCR3O14972 297 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 KATNA1O75449 491 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 WDR47O94967 919 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 KLHL2O95198 593 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 ALDOAP04075 364 aaKnown RBP10.43□□□□□ -0.74
CHMP3-205ENST00000409810 EIF2S1P05198 315 aaKnown RBP10.43□□□□□ -0.74
CHMP3-205ENST00000409810 SNRPAP09012 282 aaKnown RBP10.43□□□□□ -0.74
CHMP3-205ENST00000409810 RAB40ALP0C0E4 278 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 MYBL2P10244 700 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 NCF1P14598 390 aaPredicted RBP10.43□□□□□ -0.74
CHMP3-205ENST00000409810 NPPBP16860 134 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 EMP3P54852 163 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 ARF3P61204 181 aaPredicted RBP10.43□□□□□ -0.74
CHMP3-205ENST00000409810 YBX1P67809 324 aaKnown RBP10.43□□□□□ -0.74
CHMP3-205ENST00000409810 CSNK1G2P78368 415 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 DCDP81605 110 aaKnown RBP10.43□□□□□ -0.74
CHMP3-205ENST00000409810 RHDQ02161 417 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 SLC29A2Q14542 456 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 ACAP2Q15057 778 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 OR4D1Q15615 310 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 TSNAXIP1Q2TAA8 658 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 MUM1Q2TAK8 710 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 WASHC2DQ5SRD0 308 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 GARNL3Q5VVW2 1013 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 FRMPD2BQ6IN97 320 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 FBXO42Q6P3S6 717 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 ADGRD1Q6QNK2 874 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 THOC6Q86W42 341 aaKnown RBP10.43□□□□□ -0.74
CHMP3-205ENST00000409810 CSNK1A1LQ8N752 337 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 SLC38A9Q8NBW4 561 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 ABHD11Q8NFV4 315 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 RHEBL1Q8TAI7 183 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 DCAKDQ8WVC6 231 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 KCTD4Q8WVF5 259 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 EXT2Q93063 718 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 PTERQ96BW5 349 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 CATSPER2Q96P56 530 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 GBP5Q96PP8 586 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 DHRS4Q9BTZ2 278 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 CAPS2Q9BXY5 557 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 CHST8Q9H2A9 424 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 ALG9Q9H6U8 611 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 PELI2Q9HAT8 420 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 IGSF5Q9NSI5 407 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 PSMC3IPQ9P2W1 217 aaPredicted RBP10.43□□□□□ -0.74
CHMP3-205ENST00000409810 DHCR7Q9UBM7 475 aaKnown RBP10.43□□□□□ -0.74
CHMP3-205ENST00000409810 NDOR1Q9UHB4 597 aa10.43□□□□□ -0.74
CHMP3-205ENST00000409810 KCNE1BA0A087WTH5 132 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 LOC105369274A0A096LPK9 316 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 LOC102723532A0A0G2JNH3 316 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 HYKKA2RU49 373 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 SUPT3HB4E1H0 165 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 PRPF4O43172 522 aaKnown RBP eCLIP10.42□□□□□ -0.74
CHMP3-205ENST00000409810 NRP2O60462 931 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 SUPT3HO75486 399 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 STK16O75716 305 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 RECKO95980 971 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 RBP1P09455 135 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 COL6A2P12110 1019 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 CDH1P12830 882 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 GNAZP19086 355 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 ALAS2P22557 587 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms