RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 TSNQ15631 228 aaKnown RBP17.15■□□□□ 0.34
PDLIM2-206ENST00000409141 PPP1R3AQ16821 1122 aa17.15■□□□□ 0.34
PDLIM2-206ENST00000409141 ZXDCQ2QGD7 858 aaPredicted RBP17.15■□□□□ 0.34
PDLIM2-206ENST00000409141 LCTLQ6UWM7 567 aa17.15■□□□□ 0.34
PDLIM2-206ENST00000409141 PLD3Q8IV08 490 aa17.15■□□□□ 0.34
PDLIM2-206ENST00000409141 IFT20Q8IY31 132 aa17.15■□□□□ 0.34
PDLIM2-206ENST00000409141 EXD3Q8N9H8 876 aa17.15■□□□□ 0.34
PDLIM2-206ENST00000409141 APOBEC4Q8WW27 367 aaKnown RBP17.15■□□□□ 0.34
PDLIM2-206ENST00000409141 RERGQ96A58 199 aaPredicted RBP17.15■□□□□ 0.34
PDLIM2-206ENST00000409141 HAUS8Q9BT25 410 aa17.15■□□□□ 0.34
PDLIM2-206ENST00000409141 DHRS4Q9BTZ2 278 aa17.15■□□□□ 0.34
PDLIM2-206ENST00000409141 UNKQ9C0B0 810 aaKnown RBP17.15■□□□□ 0.34
PDLIM2-206ENST00000409141 DERL2Q9GZP9 239 aa17.15■□□□□ 0.34
PDLIM2-206ENST00000409141 CDC42EP4Q9H3Q1 356 aaKnown RBP17.15■□□□□ 0.34
PDLIM2-206ENST00000409141 WISP3O95389 354 aaPredicted RBP17.14■□□□□ 0.33
PDLIM2-206ENST00000409141 ANXA5P08758 320 aa17.14■□□□□ 0.33
PDLIM2-206ENST00000409141 RHOXF2BP0C7M4 288 aa17.14■□□□□ 0.33
PDLIM2-206ENST00000409141 ECHS1P30084 290 aa17.14■□□□□ 0.33
PDLIM2-206ENST00000409141 SLMAPQ14BN4 828 aa17.14■□□□□ 0.33
PDLIM2-206ENST00000409141 UGT8Q16880 541 aa17.14■□□□□ 0.33
PDLIM2-206ENST00000409141 FAM69BQ5VUD6 431 aa17.14■□□□□ 0.33
PDLIM2-206ENST00000409141 RAPH1Q70E73 1250 aa17.14■□□□□ 0.33
PDLIM2-206ENST00000409141 FRA10AC1Q70Z53 315 aa17.14■□□□□ 0.33
PDLIM2-206ENST00000409141 ADAMTSL2Q86TH1 951 aa17.14■□□□□ 0.33
PDLIM2-206ENST00000409141 OR56A3Q8NH54 315 aa17.14■□□□□ 0.33
PDLIM2-206ENST00000409141 OR2A5Q96R48 311 aa17.14■□□□□ 0.33
PDLIM2-206ENST00000409141 EGFL8Q99944 293 aa17.14■□□□□ 0.33
PDLIM2-206ENST00000409141 RHOXF2Q9BQY4 288 aa17.14■□□□□ 0.33
PDLIM2-206ENST00000409141 SH2B3Q9UQQ2 575 aa17.14■□□□□ 0.33
PDLIM2-206ENST00000409141 PADI2Q9Y2J8 665 aa17.14■□□□□ 0.33
PDLIM2-206ENST00000409141 OARD1Q9Y530 152 aa17.14■□□□□ 0.33
PDLIM2-206ENST00000409141 ACSL3O95573 720 aa17.13■□□□□ 0.33
PDLIM2-206ENST00000409141 PRB1P04280 392 aa17.13■□□□□ 0.33
PDLIM2-206ENST00000409141 CD63P08962 238 aa17.13■□□□□ 0.33
PDLIM2-206ENST00000409141 PIM1P11309 404 aaPredicted RBP17.13■□□□□ 0.33
PDLIM2-206ENST00000409141 ATP6V0D1P61421 351 aa17.13■□□□□ 0.33
PDLIM2-206ENST00000409141 CDKL1Q00532 357 aa17.13■□□□□ 0.33
PDLIM2-206ENST00000409141 IL10RAQ13651 578 aa17.13■□□□□ 0.33
PDLIM2-206ENST00000409141 ZKSCAN8Q15776 578 aaPredicted RBP17.13■□□□□ 0.33
PDLIM2-206ENST00000409141 UAP1Q16222 522 aaPredicted RBP17.13■□□□□ 0.33
PDLIM2-206ENST00000409141 UBAP2Q5T6F2 1119 aaKnown RBP17.13■□□□□ 0.33
PDLIM2-206ENST00000409141 CSNK1A1LQ8N752 337 aa17.13■□□□□ 0.33
PDLIM2-206ENST00000409141 CABS1Q96KC9 395 aa17.13■□□□□ 0.33
PDLIM2-206ENST00000409141 ACSS3Q9H6R3 686 aa17.13■□□□□ 0.33
PDLIM2-206ENST00000409141 SYNPO2LQ9H987 977 aa17.13■□□□□ 0.33
PDLIM2-206ENST00000409141 NFU1Q9UMS0 254 aa17.13■□□□□ 0.33
PDLIM2-206ENST00000409141 HEATR5BQ9P2D3 2071 aa17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 TXNDC9O14530 226 aa17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 CDH1P12830 882 aa17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 CD1DP15813 335 aa17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 CRABP2P29373 138 aa17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 POLE2P56282 527 aa17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 CSNK1G2P78368 415 aa17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 CSHL1Q14406 222 aa17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 MUM1Q2TAK8 710 aa17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 PRTGQ2VWP7 1150 aa17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 MROH9Q5TGP6 573 aa17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 CMC1Q7Z7K0 106 aa17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 METTL27Q8N6F8 245 aaPredicted RBP17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 THAP4Q8WY91 577 aa17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 UBXN10Q96LJ8 280 aa17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 OR4K3Q96R72 315 aa17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 SEMA4CQ9C0C4 833 aa17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 SLC22A11Q9NSA0 550 aa17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 MAN2B2Q9Y2E5 1009 aa17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 PTRH2Q9Y3E5 179 aaKnown RBP17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 KCNMB2Q9Y691 235 aa17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 KLF7O75840 302 aaPredicted RBP17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 SFTPCP11686 197 aa17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 ITGAXP20702 1163 aa17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 GRK3P35626 688 aa17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 FOLR3P41439 243 aa17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 OR1D4P47884 311 aa17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 HNMTP50135 292 aa17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 EMP3P54852 163 aa17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 RPS15AP62244 130 aaKnown RBP17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 HKDC1Q2TB90 917 aa17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 MRPL14Q6P1L8 145 aaKnown RBP17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 OVCH1Q7RTY7 1134 aa17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 THOC6Q86W42 341 aaKnown RBP17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 GEMIN8Q9NWZ8 242 aaKnown RBP17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 RUVBL1Q9Y265 456 aaKnown RBP17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 MAU2Q9Y6X3 613 aa17.12■□□□□ 0.33
PDLIM2-206ENST00000409141 ATMQ13315 3056 aa17.11■□□□□ 0.33
PDLIM2-206ENST00000409141 KCNE1BA0A087WTH5 132 aa17.11■□□□□ 0.33
PDLIM2-206ENST00000409141 FEZF1A0PJY2 475 aa17.11■□□□□ 0.33
PDLIM2-206ENST00000409141 NCF1BA6NI72 391 aaPredicted RBP17.11■□□□□ 0.33
PDLIM2-206ENST00000409141 NCF1CA8MVU1 366 aaPredicted RBP17.11■□□□□ 0.33
PDLIM2-206ENST00000409141 MED26O95402 600 aa17.11■□□□□ 0.33
PDLIM2-206ENST00000409141 ONECUT2O95948 504 aa17.11■□□□□ 0.33
PDLIM2-206ENST00000409141 SLC35E2BP0CK96 405 aa17.11■□□□□ 0.33
PDLIM2-206ENST00000409141 NCF1P14598 390 aaPredicted RBP17.11■□□□□ 0.33
PDLIM2-206ENST00000409141 CCR8P51685 355 aa17.11■□□□□ 0.33
PDLIM2-206ENST00000409141 BMPR2Q13873 1038 aa17.11■□□□□ 0.33
PDLIM2-206ENST00000409141 TGFBIQ15582 683 aa17.11■□□□□ 0.33
PDLIM2-206ENST00000409141 PRMT9Q6P2P2 845 aa17.11■□□□□ 0.33
PDLIM2-206ENST00000409141 TBC1D1Q86TI0 1168 aaPredicted RBP17.11■□□□□ 0.33
PDLIM2-206ENST00000409141 GPSM1Q86YR5 675 aa17.11■□□□□ 0.33
PDLIM2-206ENST00000409141 DTWD1Q8N5C7 304 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms