RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 H7BY64 318 aa18.37■□□□□ 0.53
SMARCB1-204ENST00000407422 EIF3FO00303 357 aaPredicted RBP18.37■□□□□ 0.53
SMARCB1-204ENST00000407422 HAT1O14929 419 aa18.37■□□□□ 0.53
SMARCB1-204ENST00000407422 VPS4BO75351 444 aa18.37■□□□□ 0.53
SMARCB1-204ENST00000407422 ZGLP1P0C6A0 271 aa18.37■□□□□ 0.53
SMARCB1-204ENST00000407422 EZRP15311 586 aaKnown RBP18.37■□□□□ 0.53
SMARCB1-204ENST00000407422 GNLYP22749 145 aa18.37■□□□□ 0.53
SMARCB1-204ENST00000407422 ITGA3P26006 1051 aa18.37■□□□□ 0.53
SMARCB1-204ENST00000407422 ELK3P41970 407 aa18.37■□□□□ 0.53
SMARCB1-204ENST00000407422 DR1Q01658 176 aa18.37■□□□□ 0.53
SMARCB1-204ENST00000407422 AIMP2Q13155 320 aaKnown RBP18.37■□□□□ 0.53
SMARCB1-204ENST00000407422 VWA2Q5GFL6 755 aa18.37■□□□□ 0.53
SMARCB1-204ENST00000407422 MBOAT1Q6ZNC8 495 aa18.37■□□□□ 0.53
SMARCB1-204ENST00000407422 CFAP36Q96G28 342 aa18.37■□□□□ 0.53
SMARCB1-204ENST00000407422 PRAP1Q96NZ9 151 aa18.37■□□□□ 0.53
SMARCB1-204ENST00000407422 TRIM51Q9BSJ1 452 aa18.37■□□□□ 0.53
SMARCB1-204ENST00000407422 NAT9Q9BTE0 207 aa18.37■□□□□ 0.53
SMARCB1-204ENST00000407422 CRB3Q9BUF7 120 aa18.37■□□□□ 0.53
SMARCB1-204ENST00000407422 PPANQ9NQ55 473 aaKnown RBP18.37■□□□□ 0.53
SMARCB1-204ENST00000407422 TAS2R13Q9NYV9 303 aa18.37■□□□□ 0.53
SMARCB1-204ENST00000407422 ZNF282Q9UDV7 671 aaPredicted RBP18.37■□□□□ 0.53
SMARCB1-204ENST00000407422 PYCARDQ9ULZ3 195 aa18.37■□□□□ 0.53
SMARCB1-204ENST00000407422 VPS4AQ9UN37 437 aa18.37■□□□□ 0.53
SMARCB1-204ENST00000407422 CHMP2BQ9UQN3 213 aa18.37■□□□□ 0.53
SMARCB1-204ENST00000407422 PDE10AQ9Y233 779 aa18.37■□□□□ 0.53
SMARCB1-204ENST00000407422 P2RX6O15547 441 aa18.36■□□□□ 0.53
SMARCB1-204ENST00000407422 STATHP02808 62 aa18.36■□□□□ 0.53
SMARCB1-204ENST00000407422 ALPPP05187 535 aa18.36■□□□□ 0.53
SMARCB1-204ENST00000407422 FBLP22087 321 aaKnown RBP18.36■□□□□ 0.53
SMARCB1-204ENST00000407422 SNRPNP63162 240 aaKnown RBP18.36■□□□□ 0.53
SMARCB1-204ENST00000407422 ABATP80404 500 aa18.36■□□□□ 0.53
SMARCB1-204ENST00000407422 OCA2Q04671 838 aa18.36■□□□□ 0.53
SMARCB1-204ENST00000407422 MORF4L2Q15014 288 aa18.36■□□□□ 0.53
SMARCB1-204ENST00000407422 RBBP7Q16576 425 aa18.36■□□□□ 0.53
SMARCB1-204ENST00000407422 TEDDM1Q5T9Z0 273 aa18.36■□□□□ 0.53
SMARCB1-204ENST00000407422 PRAMEF13Q5VWM6 474 aa18.36■□□□□ 0.53
SMARCB1-204ENST00000407422 UGT3A1Q6NUS8 523 aa18.36■□□□□ 0.53
SMARCB1-204ENST00000407422 TRMT10BQ6PF06 316 aaKnown RBP18.36■□□□□ 0.53
SMARCB1-204ENST00000407422 LAPTM4BQ86VI4 370 aa18.36■□□□□ 0.53
SMARCB1-204ENST00000407422 ARHGEF39Q8N4T4 335 aa18.36■□□□□ 0.53
SMARCB1-204ENST00000407422 GALNT11Q8NCW6 608 aa18.36■□□□□ 0.53
SMARCB1-204ENST00000407422 OR11G2Q8NGC1 345 aa18.36■□□□□ 0.53
SMARCB1-204ENST00000407422 MIEF2Q96C03 454 aa18.36■□□□□ 0.53
SMARCB1-204ENST00000407422 SEMA3GQ9NS98 782 aa18.36■□□□□ 0.53
SMARCB1-204ENST00000407422 UTP6Q9NYH9 597 aaKnown RBP18.36■□□□□ 0.53
SMARCB1-204ENST00000407422 SH2B3Q9UQQ2 575 aa18.36■□□□□ 0.53
SMARCB1-204ENST00000407422 SCN3AQ9NY46 2000 aa18.36■□□□□ 0.53
SMARCB1-204ENST00000407422 NBPF19A0A087WUL8 3843 aa18.35■□□□□ 0.53
SMARCB1-204ENST00000407422 SPTBN1Q01082 2364 aaKnown RBP18.35■□□□□ 0.53
SMARCB1-204ENST00000407422 FANCGO15287 622 aa18.35■□□□□ 0.53
SMARCB1-204ENST00000407422 EMP3P54852 163 aa18.35■□□□□ 0.53
SMARCB1-204ENST00000407422 TBPL1P62380 186 aa18.35■□□□□ 0.53
SMARCB1-204ENST00000407422 HIBCHQ6NVY1 386 aaPredicted RBP18.35■□□□□ 0.53
SMARCB1-204ENST00000407422 IGFL3Q6UXB1 125 aa18.35■□□□□ 0.53
SMARCB1-204ENST00000407422 KIAA0408Q6ZU52 694 aa18.35■□□□□ 0.53
SMARCB1-204ENST00000407422 PARP9Q8IXQ6 854 aa18.35■□□□□ 0.53
SMARCB1-204ENST00000407422 PDIK1LQ8N165 341 aa18.35■□□□□ 0.53
SMARCB1-204ENST00000407422 MCOLN3Q8TDD5 553 aa18.35■□□□□ 0.53
SMARCB1-204ENST00000407422 RERGQ96A58 199 aaPredicted RBP18.35■□□□□ 0.53
SMARCB1-204ENST00000407422 PDLIM2Q96JY6 352 aa18.35■□□□□ 0.53
SMARCB1-204ENST00000407422 NAPGQ99747 312 aaPredicted RBP18.35■□□□□ 0.53
SMARCB1-204ENST00000407422 CCDC177Q9NQR7 707 aaPredicted RBP18.35■□□□□ 0.53
SMARCB1-204ENST00000407422 C3orf18Q9UK00 162 aa18.35■□□□□ 0.53
SMARCB1-204ENST00000407422 B3GNT3Q9Y2A9 372 aa18.35■□□□□ 0.53
SMARCB1-204ENST00000407422 SAR1BQ9Y6B6 198 aa18.35■□□□□ 0.53
SMARCB1-204ENST00000407422 HIVEP3Q5T1R4 2406 aa18.35■□□□□ 0.53
SMARCB1-204ENST00000407422 IGLV3-12A0A075B6K2 115 aa18.34■□□□□ 0.53
SMARCB1-204ENST00000407422 TP73O15350 636 aa18.34■□□□□ 0.53
SMARCB1-204ENST00000407422 TTI1O43156 1089 aa18.34■□□□□ 0.53
SMARCB1-204ENST00000407422 FOXS1O43638 330 aa18.34■□□□□ 0.53
SMARCB1-204ENST00000407422 RGS4P49798 205 aa18.34■□□□□ 0.53
SMARCB1-204ENST00000407422 ITGA8P53708 1063 aa18.34■□□□□ 0.53
SMARCB1-204ENST00000407422 RELAQ04206 551 aa18.34■□□□□ 0.53
SMARCB1-204ENST00000407422 Q0VFX4 171 aa18.34■□□□□ 0.53
SMARCB1-204ENST00000407422 DSG2Q14126 1118 aa18.34■□□□□ 0.53
SMARCB1-204ENST00000407422 PHKG1Q16816 387 aa18.34■□□□□ 0.53
SMARCB1-204ENST00000407422 TUBB8Q3ZCM7 444 aa18.34■□□□□ 0.53
SMARCB1-204ENST00000407422 LRRC8EQ6NSJ5 796 aa18.34■□□□□ 0.53
SMARCB1-204ENST00000407422 SYDE1Q6ZW31 735 aaPredicted RBP18.34■□□□□ 0.53
SMARCB1-204ENST00000407422 FAM26EQ8N5C1 309 aa18.34■□□□□ 0.53
SMARCB1-204ENST00000407422 AMER3Q8N944 861 aa18.34■□□□□ 0.53
SMARCB1-204ENST00000407422 GABPB2Q8TAK5 448 aaPredicted RBP18.34■□□□□ 0.53
SMARCB1-204ENST00000407422 C8orf44Q96CB5 159 aa18.34■□□□□ 0.53
SMARCB1-204ENST00000407422 C19orf60Q96EN9 201 aa18.34■□□□□ 0.53
SMARCB1-204ENST00000407422 LINGO1Q96FE5 620 aa18.34■□□□□ 0.53
SMARCB1-204ENST00000407422 CCDC138Q96M89 665 aa18.34■□□□□ 0.53
SMARCB1-204ENST00000407422 TRIM31Q9BZY9 425 aa18.34■□□□□ 0.53
SMARCB1-204ENST00000407422 ATG10Q9H0Y0 220 aa18.34■□□□□ 0.53
SMARCB1-204ENST00000407422 PARVBQ9HBI1 364 aa18.34■□□□□ 0.53
SMARCB1-204ENST00000407422 TRPC4Q9UBN4 977 aa18.34■□□□□ 0.53
SMARCB1-204ENST00000407422 TEX264Q9Y6I9 313 aa18.34■□□□□ 0.53
SMARCB1-204ENST00000407422 A0A0A6YYC8 382 aaPredicted RBP18.34■□□□□ 0.53
SMARCB1-204ENST00000407422 I3L1I5 382 aaPredicted RBP18.34■□□□□ 0.53
SMARCB1-204ENST00000407422 TSPAN12O95859 305 aa18.34■□□□□ 0.53
SMARCB1-204ENST00000407422 C8GP07360 202 aa18.34■□□□□ 0.53
SMARCB1-204ENST00000407422 SLC26A3P40879 764 aa18.34■□□□□ 0.53
SMARCB1-204ENST00000407422 HIF1AQ16665 826 aa18.34■□□□□ 0.53
SMARCB1-204ENST00000407422 MYO1HQ8N1T3 1032 aa18.34■□□□□ 0.53
SMARCB1-204ENST00000407422 MVB12AQ96EY5 273 aa18.34■□□□□ 0.53
SMARCB1-204ENST00000407422 MMABQ96EY8 250 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms