RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 IGFBP5P24593 272 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 MNX1P50219 401 aaPredicted RBP9.53□□□□□ -0.88
MSH2-202ENST00000406134 DUOXA1Q1HG43 343 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 VMACQ2NL98 169 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 PGS1Q32NB8 556 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 PRSS36Q5K4E3 855 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 SYT6Q5T7P8 510 aaPredicted RBP9.53□□□□□ -0.88
MSH2-202ENST00000406134 OR2T5Q6IEZ7 315 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 TTC23LQ6PF05 361 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 CRTC3Q6UUV7 619 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 HSD11B1LQ7Z5J1 315 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 HIPK1Q86Z02 1210 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 RBM12BQ8IXT5 1001 aaKnown RBP9.53□□□□□ -0.88
MSH2-202ENST00000406134 CMTM8Q8IZV2 173 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 TMEM132CQ8N3T6 1108 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 OR2T29Q8NH02 315 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 ZFP90Q8TF47 636 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 TM9SF3Q9HD45 589 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 AASDHPPTQ9NRN7 309 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 B4GALT6Q9UBX8 382 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 C3orf18Q9UK00 162 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 TMED5Q9Y3A6 229 aa9.53□□□□□ -0.88
MSH2-202ENST00000406134 ARHGEF33A8MVX0 844 aa9.52□□□□□ -0.88
MSH2-202ENST00000406134 LAMP1P11279 417 aa9.52□□□□□ -0.88
MSH2-202ENST00000406134 MAP4P27816 1152 aaKnown RBP9.52□□□□□ -0.88
MSH2-202ENST00000406134 PCDH1Q08174 1060 aa9.52□□□□□ -0.88
MSH2-202ENST00000406134 MAD2L1BPQ15013 274 aaPredicted RBP9.52□□□□□ -0.88
MSH2-202ENST00000406134 ZNF385BQ569K4 471 aa9.52□□□□□ -0.88
MSH2-202ENST00000406134 FRG2Q64ET8 278 aa9.52□□□□□ -0.88
MSH2-202ENST00000406134 RETSATQ6NUM9 610 aa9.52□□□□□ -0.88
MSH2-202ENST00000406134 ZNF555Q8NEP9 628 aa9.52□□□□□ -0.88
MSH2-202ENST00000406134 VMP1Q96GC9 406 aa9.52□□□□□ -0.88
MSH2-202ENST00000406134 COX4I2Q96KJ9 171 aa9.52□□□□□ -0.88
MSH2-202ENST00000406134 ZNF641Q96N77 438 aaPredicted RBP9.52□□□□□ -0.88
MSH2-202ENST00000406134 FRG2BQ96QU4 278 aa9.52□□□□□ -0.88
MSH2-202ENST00000406134 COPS8Q99627 209 aa9.52□□□□□ -0.88
MSH2-202ENST00000406134 BBS2Q9BXC9 721 aa9.52□□□□□ -0.88
MSH2-202ENST00000406134 CPEB1Q9BZB8 566 aaKnown RBP9.52□□□□□ -0.88
MSH2-202ENST00000406134 SUV39H2Q9H5I1 410 aa9.52□□□□□ -0.88
MSH2-202ENST00000406134 ARMC7Q9H6L4 198 aa9.52□□□□□ -0.88
MSH2-202ENST00000406134 CFAP97Q9P2B7 532 aa9.52□□□□□ -0.88
MSH2-202ENST00000406134 BAG5Q9UL15 447 aa9.52□□□□□ -0.88
MSH2-202ENST00000406134 ERVW-1Q9UQF0 538 aa9.52□□□□□ -0.88
MSH2-202ENST00000406134 ZNF99A8MXY4 864 aaPredicted RBP9.52□□□□□ -0.89
MSH2-202ENST00000406134 PTGES3LE9PB15 166 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 CLIC1O00299 241 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 RFXANKO14593 260 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 TEX28O15482 410 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 NDUFS2O75306 463 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 SLCO2B1O94956 709 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 IGSF6O95976 241 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 BCL10O95999 233 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 KRT6AP02538 564 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 KRT6BP04259 564 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 C8GP07360 202 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 EFNA1P20827 205 aaPredicted RBP9.52□□□□□ -0.89
MSH2-202ENST00000406134 KRT6CP48668 564 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 ITGA1P56199 1179 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 FPGSQ05932 587 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 HSPA14Q0VDF9 509 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 CYP2A13Q16696 494 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 MPEG1Q2M385 716 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 Q6ZPB1 254 aaPredicted RBP9.52□□□□□ -0.89
MSH2-202ENST00000406134 ENTHD1Q8IYW4 607 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.52□□□□□ -0.892e-7■□□□□ 9.4
MSH2-202ENST00000406134 MCOLN3Q8TDD5 553 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 NCLNQ969V3 563 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 HHIPL1Q96JK4 782 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 HSH2DQ96JZ2 352 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 CFHR5Q9BXR6 569 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 ATG10Q9H0Y0 220 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 SLCO3A1Q9UIG8 710 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 PSIP1O75475 530 aaKnown RBP9.52□□□□□ -0.89
MSH2-202ENST00000406134 SERPINB7O75635 380 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 MT-ND2P03891 347 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 CTSLP07711 333 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 ATP1B2P14415 290 aaPredicted RBP9.52□□□□□ -0.89
MSH2-202ENST00000406134 ZNF12P17014 697 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 SERPINA4P29622 427 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 RELAQ04206 551 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 SIM2Q14190 667 aaPredicted RBP9.52□□□□□ -0.89
MSH2-202ENST00000406134 ACOX1Q15067 660 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 OXA1LQ15070 435 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 ZNF852Q6ZMS4 543 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 CAMKMTQ7Z624 323 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 SCAMP4Q969E2 229 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 MAL2Q969L2 176 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 ULK4Q96C45 1275 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 SLIRPQ9GZT3 109 aaKnown RBP9.52□□□□□ -0.89
MSH2-202ENST00000406134 RAD21L1Q9H4I0 556 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 ACOT13Q9NPJ3 140 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 FKBP14Q9NWM8 211 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 PCDHGA6Q9Y5G7 932 aa9.52□□□□□ -0.89
MSH2-202ENST00000406134 CXorf51AA0A1B0GTR3 108 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 FPGTO14772 594 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 DPM1O60762 260 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 ANGPTL1O95841 491 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 KDELR2P33947 212 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 MAPK8P45983 427 aa9.51□□□□□ -0.89
MSH2-202ENST00000406134 HNMTP50135 292 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms