RNA–Protein interactions for RNA: ENST00000399429.7

COL28A1-201, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL28A1, Length 4,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-201ENST00000399429 PCDHGB2Q9Y5G2 931 aa9.06□□□□□ -0.96
COL28A1-201ENST00000399429 CAMTA1Q9Y6Y1 1673 aa9.06□□□□□ -0.96
COL28A1-201ENST00000399429 FGF10O15520 208 aaPredicted RBP9.06□□□□□ -0.96
COL28A1-201ENST00000399429 RLN1P04808 185 aa9.06□□□□□ -0.96
COL28A1-201ENST00000399429 SERPIND1P05546 499 aa9.06□□□□□ -0.96
COL28A1-201ENST00000399429 ZNF286BP0CG31 522 aa9.06□□□□□ -0.96
COL28A1-201ENST00000399429 MC4RP32245 332 aa9.06□□□□□ -0.96
COL28A1-201ENST00000399429 BACE1P56817 501 aa9.06□□□□□ -0.96
COL28A1-201ENST00000399429 ABHD18Q0P651 414 aa9.06□□□□□ -0.96
COL28A1-201ENST00000399429 HSPA14Q0VDF9 509 aa9.06□□□□□ -0.96
COL28A1-201ENST00000399429 SPHARQ15513 63 aa9.06□□□□□ -0.96
COL28A1-201ENST00000399429 OR4D1Q15615 310 aa9.06□□□□□ -0.96
COL28A1-201ENST00000399429 CCDC157Q569K6 752 aa9.06□□□□□ -0.96
COL28A1-201ENST00000399429 INTS6LQ5JSJ4 861 aaKnown RBP9.06□□□□□ -0.96
COL28A1-201ENST00000399429 SHQ1Q6PI26 577 aaKnown RBP9.06□□□□□ -0.96
COL28A1-201ENST00000399429 ZNF367Q7RTV3 350 aa9.06□□□□□ -0.96
COL28A1-201ENST00000399429 ZNF557Q8N988 423 aaPredicted RBP9.06□□□□□ -0.96
COL28A1-201ENST00000399429 C11orf65Q8NCR3 313 aa9.06□□□□□ -0.96
COL28A1-201ENST00000399429 OR8K3Q8NH51 312 aa9.06□□□□□ -0.96
COL28A1-201ENST00000399429 BTN2A2Q8WVV5 523 aa9.06□□□□□ -0.96
COL28A1-201ENST00000399429 DUS3LQ96G46 650 aaKnown RBP9.06□□□□□ -0.96
COL28A1-201ENST00000399429 TEX37Q96LM6 180 aa9.06□□□□□ -0.96
COL28A1-201ENST00000399429 C12orf66Q96MD2 445 aa9.06□□□□□ -0.96
COL28A1-201ENST00000399429 COQ10AQ96MF6 247 aa9.06□□□□□ -0.96
COL28A1-201ENST00000399429 GPR78Q96P69 363 aa9.06□□□□□ -0.96
COL28A1-201ENST00000399429 TMED9Q9BVK6 235 aa9.06□□□□□ -0.96
COL28A1-201ENST00000399429 C11orf54Q9H0W9 315 aaPredicted RBP9.06□□□□□ -0.96
COL28A1-201ENST00000399429 ZNF304Q9HCX3 659 aa9.06□□□□□ -0.96
COL28A1-201ENST00000399429 SLAMF7Q9NQ25 335 aa9.06□□□□□ -0.96
COL28A1-201ENST00000399429 NANSQ9NR45 359 aa9.06□□□□□ -0.96
COL28A1-201ENST00000399429 MTMR10Q9NXD2 777 aa9.06□□□□□ -0.96
COL28A1-201ENST00000399429 TAS2R16Q9NYV7 291 aa9.06□□□□□ -0.96
COL28A1-201ENST00000399429 FBXW11Q9UKB1 542 aa9.06□□□□□ -0.96
COL28A1-201ENST00000399429 GPR45Q9Y5Y3 372 aa9.06□□□□□ -0.96
COL28A1-201ENST00000399429 ALG5Q9Y673 324 aa9.06□□□□□ -0.96
COL28A1-201ENST00000399429 HSPE1-MOB4S4R3N1 261 aa9.06□□□□□ -0.96
COL28A1-201ENST00000399429 NUP188Q5SRE5 1749 aa9.06□□□□□ -0.96
COL28A1-201ENST00000399429 LOC105369274A0A096LPK9 316 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 WASHC1A8K0Z3 465 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 UBFD1O14562 309 aaKnown RBP9.05□□□□□ -0.96
COL28A1-201ENST00000399429 ANXA5P08758 320 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 CD1DP15813 335 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 CD68P34810 354 aaPredicted RBP9.05□□□□□ -0.96
COL28A1-201ENST00000399429 TGFBR2P37173 567 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 ALDH9A1P49189 494 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 MAN2A2P49641 1150 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 BCL2L1Q07817 233 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 BOP1Q14137 746 aaKnown RBP9.05□□□□□ -0.96
COL28A1-201ENST00000399429 PIK3R6Q5UE93 754 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 PGBD2Q6P3X8 592 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 C11orf96Q7Z7L8 435 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 OR4N4Q8N0Y3 316 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 FAM193BQ96PV7 902 aaPredicted RBP9.05□□□□□ -0.96
COL28A1-201ENST00000399429 SLC25A51Q9H1U9 297 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 CD93Q9NPY3 652 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 MIEF1Q9NQG6 463 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 SMPD4Q9NXE4 827 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 RHCGQ9UBD6 479 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 ABCD2Q9UBJ2 740 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 MAFBQ9Y5Q3 323 aaPredicted RBP9.05□□□□□ -0.96
COL28A1-201ENST00000399429 IQCF5A8MTL0 148 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 FABP7O15540 132 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 MPZL2O60487 215 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 STX11O75558 287 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 TRBC1P01850 177 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 ATXN8OSP0DMR3 200 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 RPS5P46782 204 aaKnown RBP9.05□□□□□ -0.96
COL28A1-201ENST00000399429 ETV1P50549 477 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 GMFBP60983 142 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 GHRHRQ02643 423 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 CREB5Q02930 508 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 ADAM15Q13444 863 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 NDUFAF5Q5TEU4 345 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 B3GNT9Q6UX72 402 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 MARCH9Q86YJ5 346 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 SLC22A15Q8IZD6 547 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 FTMTQ8N4E7 242 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 BEND7Q8N7W2 519 aaPredicted RBP9.05□□□□□ -0.96
COL28A1-201ENST00000399429 OR2T35Q8NGX2 323 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 NUDT8Q8WV74 236 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 ZNF599Q96NL3 588 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 MINDY3Q9H8M7 445 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 FANCFQ9NPI8 374 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 ENAMQ9NRM1 1142 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 TRPM5Q9NZQ8 1165 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 MARCH4Q9P2E8 410 aaPredicted RBP9.05□□□□□ -0.96
COL28A1-201ENST00000399429 YARS2Q9Y2Z4 477 aaKnown RBP9.05□□□□□ -0.96
COL28A1-201ENST00000399429 CASTOR2A6NHX0 329 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 POM121CA8CG34 1229 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 KHDRBS3O75525 346 aaKnown RBP9.05□□□□□ -0.96
COL28A1-201ENST00000399429 GLUD1P00367 558 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 C1QAP02745 245 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 SLC10A3P09131 477 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 HTR6P50406 440 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 ERVFC1P60507 584 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 SLC35A2P78381 396 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 STX4Q12846 297 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 CNTN1Q12860 1018 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 SLC9A5Q14940 896 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 NADSYN1Q6IA69 706 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms