RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 FOXJ2Q9P0K8 574 aa16.94■□□□□ 0.3
CTNS-203ENST00000399306 XPR1Q9UBH6 696 aa16.94■□□□□ 0.3
CTNS-203ENST00000399306 GRID1Q9ULK0 1009 aa16.94■□□□□ 0.3
CTNS-203ENST00000399306 SRPK3Q9UPE1 567 aa16.94■□□□□ 0.3
CTNS-203ENST00000399306 FRYQ5TBA9 3013 aa16.94■□□□□ 0.3
CTNS-203ENST00000399306 ANKRD11Q6UB99 2663 aaPredicted RBP16.93■□□□□ 0.3
CTNS-203ENST00000399306 A0A1W2PPM1 405 aa16.93■□□□□ 0.3
CTNS-203ENST00000399306 TLDC2A0PJX2 215 aa16.93■□□□□ 0.3
CTNS-203ENST00000399306 NCF1BA6NI72 391 aaPredicted RBP16.93■□□□□ 0.3
CTNS-203ENST00000399306 NCF1CA8MVU1 366 aaPredicted RBP16.93■□□□□ 0.3
CTNS-203ENST00000399306 E7EQ34 232 aa16.93■□□□□ 0.3
CTNS-203ENST00000399306 K7EPI3 171 aa16.93■□□□□ 0.3
CTNS-203ENST00000399306 CTSVO60911 334 aa16.93■□□□□ 0.3
CTNS-203ENST00000399306 CPNE3O75131 537 aaKnown RBP16.93■□□□□ 0.3
CTNS-203ENST00000399306 SMIM24O75264 130 aa16.93■□□□□ 0.3
CTNS-203ENST00000399306 WDR47O94967 919 aa16.93■□□□□ 0.3
CTNS-203ENST00000399306 GFAPP14136 432 aa16.93■□□□□ 0.3
CTNS-203ENST00000399306 NCF1P14598 390 aaPredicted RBP16.93■□□□□ 0.3
CTNS-203ENST00000399306 PIK3CGP48736 1102 aa16.93■□□□□ 0.3
CTNS-203ENST00000399306 CSNK1G2P78368 415 aa16.93■□□□□ 0.3
CTNS-203ENST00000399306 NFKB2Q00653 900 aa16.93■□□□□ 0.3
CTNS-203ENST00000399306 ZNF844Q08AG5 666 aa16.93■□□□□ 0.3
CTNS-203ENST00000399306 CDC16Q13042 620 aa16.93■□□□□ 0.3
CTNS-203ENST00000399306 PWWP2BQ6NUJ5 590 aa16.93■□□□□ 0.3
CTNS-203ENST00000399306 TMEM151AQ8N4L1 468 aa16.93■□□□□ 0.3
CTNS-203ENST00000399306 TBC1D19Q8N5T2 526 aa16.93■□□□□ 0.3
CTNS-203ENST00000399306 OR1L3Q8NH93 324 aa16.93■□□□□ 0.3
CTNS-203ENST00000399306 ZCCHC14Q8WYQ9 949 aaKnown RBP16.93■□□□□ 0.3
CTNS-203ENST00000399306 NEIL2Q969S2 332 aa16.93■□□□□ 0.3
CTNS-203ENST00000399306 ALKBH8Q96BT7 664 aaKnown RBP16.93■□□□□ 0.3
CTNS-203ENST00000399306 WDR34Q96EX3 536 aa16.93■□□□□ 0.3
CTNS-203ENST00000399306 SEC16BQ96JE7 1060 aa16.93■□□□□ 0.3
CTNS-203ENST00000399306 SCYL1Q96KG9 808 aa16.93■□□□□ 0.3
CTNS-203ENST00000399306 SELENOSQ9BQE4 189 aa16.93■□□□□ 0.3
CTNS-203ENST00000399306 ZNF358Q9NW07 568 aa16.93■□□□□ 0.3
CTNS-203ENST00000399306 ARGLU1Q9NWB6 273 aaPredicted RBP16.93■□□□□ 0.3
CTNS-203ENST00000399306 CUEDC1Q9NWM3 386 aaPredicted RBP16.93■□□□□ 0.3
CTNS-203ENST00000399306 COPG2Q9UBF2 871 aa16.93■□□□□ 0.3
CTNS-203ENST00000399306 KLHL20Q9Y2M5 609 aa16.93■□□□□ 0.3
CTNS-203ENST00000399306 SMIM23A6NLE4 172 aa16.92■□□□□ 0.3
CTNS-203ENST00000399306 H7BY64 318 aa16.92■□□□□ 0.3
CTNS-203ENST00000399306 ZSCAN9O15535 394 aaPredicted RBP16.92■□□□□ 0.3
CTNS-203ENST00000399306 SCRG1O75711 98 aa16.92■□□□□ 0.3
CTNS-203ENST00000399306 OR2B3O76000 313 aa16.92■□□□□ 0.3
CTNS-203ENST00000399306 STK17BO94768 372 aa16.92■□□□□ 0.3
CTNS-203ENST00000399306 CDH1P12830 882 aa16.92■□□□□ 0.3
CTNS-203ENST00000399306 TAC1P20366 129 aa16.92■□□□□ 0.3
CTNS-203ENST00000399306 CXCR2P25025 360 aa16.92■□□□□ 0.3
CTNS-203ENST00000399306 GSTM2P28161 218 aa16.92■□□□□ 0.3
CTNS-203ENST00000399306 CASP2P42575 452 aa16.92■□□□□ 0.3
CTNS-203ENST00000399306 GCGRP47871 477 aa16.92■□□□□ 0.3
CTNS-203ENST00000399306 HSPA7P48741 367 aa16.92■□□□□ 0.3
CTNS-203ENST00000399306 ARSFP54793 590 aa16.92■□□□□ 0.3
CTNS-203ENST00000399306 YBX1P67809 324 aaKnown RBP16.92■□□□□ 0.3
CTNS-203ENST00000399306 TBCCQ15814 346 aa16.92■□□□□ 0.3
CTNS-203ENST00000399306 PDK4Q16654 411 aa16.92■□□□□ 0.3
CTNS-203ENST00000399306 CCDC153Q494R4 210 aa16.92■□□□□ 0.3
CTNS-203ENST00000399306 MANEAQ5SRI9 462 aa16.92■□□□□ 0.3
CTNS-203ENST00000399306 NXPE4Q6UWF7 544 aa16.92■□□□□ 0.3
CTNS-203ENST00000399306 ESX1Q8N693 406 aa16.92■□□□□ 0.3
CTNS-203ENST00000399306 PMEPA1Q969W9 287 aa16.92■□□□□ 0.3
CTNS-203ENST00000399306 PRAP1Q96NZ9 151 aa16.92■□□□□ 0.3
CTNS-203ENST00000399306 OR2A5Q96R48 311 aa16.92■□□□□ 0.3
CTNS-203ENST00000399306 CTRCQ99895 268 aa16.92■□□□□ 0.3
CTNS-203ENST00000399306 DPH2Q9BQC3 489 aaPredicted RBP16.92■□□□□ 0.3
CTNS-203ENST00000399306 C1QTNF3Q9BXJ4 246 aa16.92■□□□□ 0.3
CTNS-203ENST00000399306 ULBP3Q9BZM4 244 aa16.92■□□□□ 0.3
CTNS-203ENST00000399306 NT5DC2Q9H857 520 aa16.92■□□□□ 0.3
CTNS-203ENST00000399306 OPTCQ9UBM4 332 aa16.92■□□□□ 0.3
CTNS-203ENST00000399306 SSUH2Q9Y2M2 353 aa16.92■□□□□ 0.3
CTNS-203ENST00000399306 TRBC2A0A5B9 178 aa16.91■□□□□ 0.3
CTNS-203ENST00000399306 CLGNO14967 610 aa16.91■□□□□ 0.3
CTNS-203ENST00000399306 TLX3O43711 291 aaPredicted RBP16.91■□□□□ 0.3
CTNS-203ENST00000399306 KATNA1O75449 491 aa16.91■□□□□ 0.3
CTNS-203ENST00000399306 KRT4P19013 534 aa16.91■□□□□ 0.3
CTNS-203ENST00000399306 GDF5P43026 501 aa16.91■□□□□ 0.3
CTNS-203ENST00000399306 NAA20P61599 178 aa16.91■□□□□ 0.3
CTNS-203ENST00000399306 ABHD18Q0P651 414 aa16.91■□□□□ 0.3
CTNS-203ENST00000399306 GRM7Q14831 915 aa16.91■□□□□ 0.3
CTNS-203ENST00000399306 PFKFB4Q16877 469 aa16.91■□□□□ 0.3
CTNS-203ENST00000399306 PRTGQ2VWP7 1150 aa16.91■□□□□ 0.3
CTNS-203ENST00000399306 FAM214AQ32MH5 1076 aa16.91■□□□□ 0.3
CTNS-203ENST00000399306 KRT71Q3SY84 523 aa16.91■□□□□ 0.3
CTNS-203ENST00000399306 GARNL3Q5VVW2 1013 aa16.91■□□□□ 0.3
CTNS-203ENST00000399306 ATG9BQ674R7 924 aa16.91■□□□□ 0.3
CTNS-203ENST00000399306 RHBDD2Q6NTF9 364 aa16.91■□□□□ 0.3
CTNS-203ENST00000399306 SLCO4C1Q6ZQN7 724 aa16.91■□□□□ 0.3
CTNS-203ENST00000399306 TMEM126BQ8IUX1 230 aa16.91■□□□□ 0.3
CTNS-203ENST00000399306 SLC22A9Q8IVM8 553 aa16.91■□□□□ 0.3
CTNS-203ENST00000399306 NLGN4XQ8N0W4 816 aa16.91■□□□□ 0.3
CTNS-203ENST00000399306 NLGN4YQ8NFZ3 816 aaPredicted RBP16.91■□□□□ 0.3
CTNS-203ENST00000399306 RDH11Q8TC12 318 aa16.91■□□□□ 0.3
CTNS-203ENST00000399306 PROKR1Q8TCW9 393 aa16.91■□□□□ 0.3
CTNS-203ENST00000399306 EXT2Q93063 718 aa16.91■□□□□ 0.3
CTNS-203ENST00000399306 CCDC126Q96EE4 140 aa16.91■□□□□ 0.3
CTNS-203ENST00000399306 ZIM3Q96PE6 472 aa16.91■□□□□ 0.3
CTNS-203ENST00000399306 AIF1LQ9BQI0 150 aa16.91■□□□□ 0.3
CTNS-203ENST00000399306 TMEM216Q9P0N5 145 aa16.91■□□□□ 0.3
CTNS-203ENST00000399306 MID2Q9UJV3 735 aa16.91■□□□□ 0.3
CTNS-203ENST00000399306 GOLGA8RI6L899 631 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms