RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 HYKKA2RU49 373 aa13.46□□□□□ -0.25
HLA-DQB1-202ENST00000399079 FITM1A5D6W6 292 aa13.46□□□□□ -0.25
HLA-DQB1-202ENST00000399079 C9J4A7 227 aa13.46□□□□□ -0.25
HLA-DQB1-202ENST00000399079 CNOT3O75175 753 aaKnown RBP13.46□□□□□ -0.25
HLA-DQB1-202ENST00000399079 STATHP02808 62 aa13.46□□□□□ -0.25
HLA-DQB1-202ENST00000399079 RAB40ALP0C0E4 278 aa13.46□□□□□ -0.25
HLA-DQB1-202ENST00000399079 EZRP15311 586 aaKnown RBP13.46□□□□□ -0.25
HLA-DQB1-202ENST00000399079 PHBP35232 272 aa13.46□□□□□ -0.25
HLA-DQB1-202ENST00000399079 ARSFP54793 590 aa13.46□□□□□ -0.25
HLA-DQB1-202ENST00000399079 RAB10P61026 200 aa13.46□□□□□ -0.25
HLA-DQB1-202ENST00000399079 ILF2Q12905 390 aaKnown RBP13.46□□□□□ -0.25
HLA-DQB1-202ENST00000399079 BMPR2Q13873 1038 aa13.46□□□□□ -0.25
HLA-DQB1-202ENST00000399079 UAP1Q16222 522 aaPredicted RBP13.46□□□□□ -0.25
HLA-DQB1-202ENST00000399079 HKDC1Q2TB90 917 aa13.46□□□□□ -0.25
HLA-DQB1-202ENST00000399079 NKAIN1Q4KMZ8 207 aa13.46□□□□□ -0.25
HLA-DQB1-202ENST00000399079 CAPN13Q6MZZ7 669 aaPredicted RBP13.46□□□□□ -0.25
HLA-DQB1-202ENST00000399079 SYVN1Q86TM6 617 aa13.46□□□□□ -0.25
HLA-DQB1-202ENST00000399079 TTC29Q8NA56 475 aaPredicted RBP13.46□□□□□ -0.25
HLA-DQB1-202ENST00000399079 OR56A3Q8NH54 315 aa13.46□□□□□ -0.25
HLA-DQB1-202ENST00000399079 PROKR1Q8TCW9 393 aa13.46□□□□□ -0.25
HLA-DQB1-202ENST00000399079 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.46□□□□□ -0.25
HLA-DQB1-202ENST00000399079 FBXL8Q96CD0 374 aa13.46□□□□□ -0.25
HLA-DQB1-202ENST00000399079 WBP1Q96G27 269 aa13.46□□□□□ -0.25
HLA-DQB1-202ENST00000399079 CATSPER2Q96P56 530 aa13.46□□□□□ -0.25
HLA-DQB1-202ENST00000399079 CYTH2Q99418 400 aa13.46□□□□□ -0.25
HLA-DQB1-202ENST00000399079 DERL2Q9GZP9 239 aa13.46□□□□□ -0.25
HLA-DQB1-202ENST00000399079 PCBD2Q9H0N5 130 aa13.46□□□□□ -0.25
HLA-DQB1-202ENST00000399079 ENAMQ9NRM1 1142 aa13.46□□□□□ -0.25
HLA-DQB1-202ENST00000399079 IFT80Q9P2H3 777 aaPredicted RBP13.46□□□□□ -0.25
HLA-DQB1-202ENST00000399079 NOVA2Q9UNW9 492 aaKnown RBP13.46□□□□□ -0.25
HLA-DQB1-202ENST00000399079 FEZF1A0PJY2 475 aa13.45□□□□□ -0.26
HLA-DQB1-202ENST00000399079 HMX2A2RU54 273 aa13.45□□□□□ -0.26
HLA-DQB1-202ENST00000399079 NCF1BA6NI72 391 aaPredicted RBP13.45□□□□□ -0.26
HLA-DQB1-202ENST00000399079 NCF1CA8MVU1 366 aaPredicted RBP13.45□□□□□ -0.26
HLA-DQB1-202ENST00000399079 DSCR3O14972 297 aa13.45□□□□□ -0.26
HLA-DQB1-202ENST00000399079 KLF7O75840 302 aaPredicted RBP13.45□□□□□ -0.26
HLA-DQB1-202ENST00000399079 SLC35E2BP0CK96 405 aa13.45□□□□□ -0.26
HLA-DQB1-202ENST00000399079 CDH1P12830 882 aa13.45□□□□□ -0.26
HLA-DQB1-202ENST00000399079 NCF1P14598 390 aaPredicted RBP13.45□□□□□ -0.26
HLA-DQB1-202ENST00000399079 CD1DP15813 335 aa13.45□□□□□ -0.26
HLA-DQB1-202ENST00000399079 CCND1P24385 295 aa13.45□□□□□ -0.26
HLA-DQB1-202ENST00000399079 OR1D4P47884 311 aa13.45□□□□□ -0.26
HLA-DQB1-202ENST00000399079 CSNK1G2P78368 415 aa13.45□□□□□ -0.26
HLA-DQB1-202ENST00000399079 NAB1Q13506 487 aa13.45□□□□□ -0.26
HLA-DQB1-202ENST00000399079 CSHL1Q14406 222 aa13.45□□□□□ -0.26
HLA-DQB1-202ENST00000399079 UGT8Q16880 541 aa13.45□□□□□ -0.26
HLA-DQB1-202ENST00000399079 C18orf21Q32NC0 220 aaPredicted RBP13.45□□□□□ -0.26
HLA-DQB1-202ENST00000399079 MROH9Q5TGP6 573 aa13.45□□□□□ -0.26
HLA-DQB1-202ENST00000399079 LCTLQ6UWM7 567 aa13.45□□□□□ -0.26
HLA-DQB1-202ENST00000399079 RAPH1Q70E73 1250 aa13.45□□□□□ -0.26
HLA-DQB1-202ENST00000399079 ADAMTSL2Q86TH1 951 aa13.45□□□□□ -0.26
HLA-DQB1-202ENST00000399079 C17orf64Q86WR6 236 aa13.45□□□□□ -0.26
HLA-DQB1-202ENST00000399079 LSM14AQ8ND56 463 aaKnown RBP13.45□□□□□ -0.26
HLA-DQB1-202ENST00000399079 UHMK1Q8TAS1 419 aaKnown RBP13.45□□□□□ -0.26
HLA-DQB1-202ENST00000399079 ATL1Q8WXF7 558 aa13.45□□□□□ -0.26
HLA-DQB1-202ENST00000399079 PTERQ96BW5 349 aa13.45□□□□□ -0.26
HLA-DQB1-202ENST00000399079 UBXN10Q96LJ8 280 aa13.45□□□□□ -0.26
HLA-DQB1-202ENST00000399079 C10orf90Q96M02 699 aa13.45□□□□□ -0.26
HLA-DQB1-202ENST00000399079 EGFL8Q99944 293 aa13.45□□□□□ -0.26
HLA-DQB1-202ENST00000399079 TSPYL1Q9H0U9 437 aa13.45□□□□□ -0.26
HLA-DQB1-202ENST00000399079 ACSS3Q9H6R3 686 aa13.45□□□□□ -0.26
HLA-DQB1-202ENST00000399079 TMEM184CQ9NVA4 438 aa13.45□□□□□ -0.26
HLA-DQB1-202ENST00000399079 RUVBL1Q9Y265 456 aaKnown RBP13.45□□□□□ -0.26
HLA-DQB1-202ENST00000399079 OARD1Q9Y530 152 aa13.45□□□□□ -0.26
HLA-DQB1-202ENST00000399079 KCNMB2Q9Y691 235 aa13.45□□□□□ -0.26
HLA-DQB1-202ENST00000399079 MAU2Q9Y6X3 613 aa13.45□□□□□ -0.26
HLA-DQB1-202ENST00000399079 MDC1Q14676 2089 aaKnown RBP13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 EIF4E1BA6NMX2 242 aaKnown RBP13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 P2RX6O15547 441 aa13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 C1QL1O75973 258 aa13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 RECKO95980 971 aa13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 ANXA5P08758 320 aa13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 GDF5P43026 501 aa13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 CCR10P46092 362 aa13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 POLE2P56282 527 aa13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 SNRPNP63162 240 aaKnown RBP13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 MEF2AQ02078 507 aaPredicted RBP13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 DLG1Q12959 904 aa13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 TGFBIQ15582 683 aa13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 OR4D1Q15615 310 aa13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 PRTGQ2VWP7 1150 aa13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 FAM214AQ32MH5 1076 aa13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 FBXO48Q5FWF7 155 aa13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 MRPL14Q6P1L8 145 aaKnown RBP13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 CEP128Q6ZU80 1094 aa13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 FRA10AC1Q70Z53 315 aa13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 IFT20Q8IY31 132 aa13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 CSNK1A1LQ8N752 337 aa13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 RERGQ96A58 199 aaPredicted RBP13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 TSNARE1Q96NA8 513 aa13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 MACROD1Q9BQ69 325 aa13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 GPN3Q9UHW5 284 aaPredicted RBP13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 POLHQ9Y253 713 aa13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 SLC22A14Q9Y267 594 aa13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 CFAP46Q8IYW2 2715 aa13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 TK2O00142 265 aa13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 LCMT2O60294 686 aaKnown RBP13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 HRH2P25021 359 aa13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 KCNC1P48547 511 aa13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 CDKL1Q00532 357 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms