RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 AOC2O75106 756 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 OXSR1O95747 527 aaPredicted RBP8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 PET100P0DJ07 73 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 GNSP15586 552 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 GADD45AP24522 165 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 MAZP56270 477 aaKnown RBP8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 RHDQ02161 417 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 ZNF460Q14592 562 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 PUM1Q14671 1186 aaKnown RBP eCLIP8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 PLEKHN1Q494U1 663 aaPredicted RBP8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 NUP188Q5SRE5 1749 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 TPRG1LQ5T0D9 272 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 TMEM214Q6NUQ4 689 aaKnown RBP8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 SLC9B2Q86UD5 537 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 SPAG16Q8N0X2 631 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 KREMEN2Q8NCW0 462 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 PSD4Q8NDX1 1056 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 OR52E4Q8NGH9 312 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 ASPNQ9BXN1 380 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 MEAF6Q9HAF1 191 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 MAP10Q9P2G4 905 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 SLC7A8Q9UHI5 535 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 NR2E1Q9Y466 385 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 MAGED1Q9Y5V3 778 aaPredicted RBP8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 CHD2O14647 1828 aaKnown RBP8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 SNED1Q8TER0 1413 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 OR2AT4A6NND4 320 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 YJEFN3A6XGL0 299 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 L7N2F9 121 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 SCDO00767 359 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 DLGAP1O14490 977 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 HCN1O60741 890 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 CPNE3O75131 537 aaKnown RBP8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 AGXTP21549 392 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 LMO2P25791 158 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 ACTR1BP42025 376 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 SUOXP51687 545 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 VAMP2P63027 116 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 GHRHRQ02643 423 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 ENPP2Q13822 863 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 MYLK3Q32MK0 819 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 ZNF678Q5SXM1 525 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 PRAMEF17Q5VTA0 474 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 CYS1Q717R9 158 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 LDB1Q86U70 411 aaPredicted RBP8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 PARP8Q8N3A8 854 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 HDDC3Q8N4P3 179 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 SLC35F5Q8WV83 523 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 SLC5A11Q8WWX8 675 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 EIF3KQ9UBQ5 218 aaKnown RBP8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 C19orf25Q9UFG5 118 aaPredicted RBP8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 MKL2Q9ULH7 1088 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 RIPK3Q9Y572 518 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 A0A096LPI6 279 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 MYBPHLA2RUH7 354 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 GLTPD2A6NH11 291 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 ZNF726A6NNF4 738 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 DCDC1P59894 354 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 TSPAN5P62079 268 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 ZNF33BQ06732 778 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 MAB21L1Q13394 359 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 PTGR1Q14914 329 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 GKN2Q86XP6 184 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 ARL14EPQ8N8R7 260 aaPredicted RBP8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 ZMIZ2Q8NF64 920 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 C1orf216Q8TAB5 229 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 ADAMTS18Q8TE60 1221 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 TESCQ96BS2 214 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 CDKN2AIPNLQ96HQ2 116 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 CCDC115Q96NT0 180 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 ZNF317Q96PQ6 595 aaPredicted RBP8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 ZNF382Q96SR6 550 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 OR2AG1Q9H205 316 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 ABCB8Q9NUT2 735 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 CYTH4Q9UIA0 394 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 KLHL21Q9UJP4 597 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 FZD1Q9UP38 647 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 C14orf166Q9Y224 244 aaKnown RBP8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 OARD1Q9Y530 152 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 WASF2Q9Y6W5 498 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 PRAMEF11O60813 436 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 ACTC1P68032 377 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 ACTA1P68133 377 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 GRIK2Q13002 908 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 LRRC32Q14392 662 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 C12orf40Q86WS4 652 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 NPAS3Q8IXF0 933 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 PROKR2Q8NFJ6 384 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 ZNF516Q92618 1163 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 LRCH3Q96II8 777 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 NKIRAS2Q9NYR9 191 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 PCDHAC2Q9Y5I4 1007 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 TRBC2A0A5B9 178 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 H0YGN5 161 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 FAAHO00519 579 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 PPEF2O14830 753 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 ITM2AO43736 263 aa8.14□□□□□ -1.11
SPTLC3-201ENST00000399002 PIAS1O75925 651 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms