RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 CPB2Q96IY4 423 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 HSPA12BQ96MM6 686 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 GPR174Q9BXC1 333 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 POMKQ9H5K3 350 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 B3GAT1Q9P2W7 334 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 ZMAT5Q9UDW3 170 aaKnown RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 ZNF639Q9UID6 485 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 CNOT6Q9ULM6 557 aaKnown RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 GRIP1Q9Y3R0 1128 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 LYVE1Q9Y5Y7 322 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 DOCK9Q9BZ29 2069 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 GREB1Q4ZG55 1949 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 ARPC4-TTLL3A0A0A6YYG9 625 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 OR14I1A6ND48 311 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 DNALI1O14645 258 aaPredicted RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 C7P10643 843 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 CD46P15529 392 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 PRPS1L1P21108 318 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 KCNA3P22001 575 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 PBLDP30039 288 aaPredicted RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 KCNJ5P48544 419 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 CACNB2Q08289 660 aaPredicted RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 TOB2Q14106 344 aaPredicted RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 SERTAD2Q14140 314 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 EXT1Q16394 746 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 ZNF423Q2M1K9 1284 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 EXOC3L2Q2M3D2 409 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 TMEM119Q4V9L6 283 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 PLEKHS1Q5SXH7 462 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 TSTD2Q5T7W7 516 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 ALG1LQ6GMV1 187 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 TMEM53Q6P2H8 277 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 UGT2A3Q6UWM9 527 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 CEACAM20Q6UY09 585 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 USP49Q70CQ1 688 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 ZNF100Q8IYN0 542 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 OR56A3Q8NH54 315 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 JPH3Q8WXH2 748 aaPredicted RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 PCED1AQ9H1Q7 454 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 RNF121Q9H920 327 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 AGO3Q9H9G7 860 aaKnown RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 IL23AQ9NPF7 189 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 PNPLA3Q9NST1 481 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 ZNF346Q9UL40 294 aaKnown RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 RAB26Q9ULW5 256 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 SEC16AO15027 2179 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 A0A0G2JMZ2 1700 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 LRRC37A2A6NM11 1700 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 ELOA3DA6NLF2 546 aaPredicted RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 NDUFS4O43181 175 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 OR10H3O60404 316 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 TBL1XO60907 577 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 AP2A1O95782 977 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 BPNT1O95861 308 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 C8AP07357 584 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 DBTP11182 482 aaKnown RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 SELEP16581 610 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 FDXRP22570 491 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 CHMP24386 653 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 CORO1AP31146 461 aaKnown RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 ACY1Q03154 408 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 CXCL9Q07325 125 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 ELOA3BQ3SY89 546 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 TMEM198Q66K66 360 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 NIPAL3Q6P499 406 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 KDELC1Q6UW63 502 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 BNIPLQ7Z465 357 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 SMYD4Q8IYR2 804 aaPredicted RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 CARFQ8N187 725 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 CPXM2Q8N436 756 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 ELOA3Q8NG57 546 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 FRS2Q8WU20 508 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 CHPT1Q8WUD6 406 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 ISG20Q96AZ6 181 aaKnown RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 KLHDC7BQ96G42 594 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 SNX27Q96L92 541 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 WDR92Q96MX6 357 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 RDH12Q96NR8 316 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 GFM1Q96RP9 751 aaKnown RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 PKP4Q99569 1192 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 ZNF184Q99676 751 aaPredicted RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 SAMSN1Q9NSI8 373 aaKnown RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 FBXL12Q9NXK8 326 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 TAS2R8Q9NYW2 309 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 KCNIP1Q9NZI2 227 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 MED11Q9P086 117 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 CFAP97Q9P2B7 532 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 SLC17A6Q9P2U8 582 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 MBD1Q9UIS9 605 aaPredicted RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 GREB1LQ9C091 1923 aaPredicted RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 ARL5CA6NH57 179 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 GFRA2O00451 464 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 NR5A2O00482 541 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 BRINP1O60477 761 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 DLGAP3O95886 979 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 IFNA21P01568 189 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 IFNA5P01569 189 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 GLB1P16278 677 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 EPORP19235 508 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 CLCN3P51790 818 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms