RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 FEM1AQ9BSK4 669 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 TCF7L1Q9HCS4 588 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 FANCFQ9NPI8 374 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 APOBEC3BQ9UH17 382 aaKnown RBP11.05□□□□□ -0.64
TTC28-201ENST00000397906 RIMKLBQ9ULI2 386 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 SLC30A4O14863 429 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 TMEM63AO94886 807 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 NADKO95544 446 aaPredicted RBP11.05□□□□□ -0.64
TTC28-201ENST00000397906 IL12AP29459 219 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 PTP4A2Q12974 167 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 FAM92BQ6ZTR7 304 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 NFKBIDQ8NI38 313 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 THEM6Q8WUY1 208 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 PIAS3Q9Y6X2 628 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 ENGP17813 658 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 FBLP22087 321 aaKnown RBP11.04□□□□□ -0.64
TTC28-201ENST00000397906 ADARP55265 1226 aaKnown RBP11.04□□□□□ -0.64
TTC28-201ENST00000397906 DENND1AQ8TEH3 1009 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 PKP4Q99569 1192 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 TMEM248Q9NWD8 314 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 FKBP7Q9Y680 259 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 PRORSD1PA6NEY8 169 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 RNF13O43567 381 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 DLG1Q12959 904 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 CRB2Q5IJ48 1285 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 DIRAS2Q96HU8 199 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 LGR4Q9BXB1 951 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 POU2F3Q9UKI9 436 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 RNF11Q9Y3C5 154 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 ZNF879B4DU55 563 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 CH25HO95992 272 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 MAP3K8P41279 467 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 NNATQ16517 81 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 C14orf80Q86SX3 495 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 C7orf26Q96N11 449 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 KCNC2Q96PR1 638 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 H7BY64 318 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 THRBP10828 461 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 PSMA1P25786 263 aaKnown RBP11.04□□□□□ -0.64
TTC28-201ENST00000397906 RBMS1P29558 406 aaKnown RBP11.04□□□□□ -0.64
TTC28-201ENST00000397906 TMEM214Q6NUQ4 689 aaKnown RBP11.04□□□□□ -0.64
TTC28-201ENST00000397906 Q6ZVL8 140 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 TMEM110Q86TL2 294 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 PGAM4Q8N0Y7 254 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 PRAP1Q96NZ9 151 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 C16orf70Q9BSU1 422 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 MALT1Q9UDY8 824 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 BAZ2AQ9UIF9 1905 aaKnown RBP11.04□□□□□ -0.64
TTC28-201ENST00000397906 TGM5O43548 720 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 HNF1BP35680 557 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 TRAP1Q12931 704 aaKnown RBP11.04□□□□□ -0.64
TTC28-201ENST00000397906 IDNKQ5T6J7 187 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 LRRC70Q7Z2Q7 622 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 GOLGA7Q7Z5G4 137 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 STX12Q86Y82 276 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 NIPA2Q8N8Q9 360 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 EFCAB11Q9BUY7 163 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 LTBP3Q9NS15 1303 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 MYH2Q9UKX2 1941 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 VSTM5A8MXK1 200 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 GPR32O75388 356 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 GGT5P36269 586 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 OLFML1Q6UWY5 402 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 CBR4Q8N4T8 237 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 SMPDL3AQ92484 453 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 SPATA7Q9P0W8 599 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 C2orf74A8MZ97 194 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 GPR89AB7ZAQ6 455 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 GPR89BP0CG08 455 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 MATN1P21941 496 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 OTX2P32243 289 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 DCAF4L2Q8NA75 395 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 SMG8Q8ND04 991 aaKnown RBP11.04□□□□□ -0.64
TTC28-201ENST00000397906 SMARCD2Q92925 531 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 TTTY10Q9BZA0 68 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 CST11Q9H112 138 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 FEZF1A0PJY2 475 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 NPHS1O60500 1241 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 BEST1O76090 585 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 JUPP14923 745 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 ALDH3A2P51648 485 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 CARD17Q5XLA6 110 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 SCAMP4Q969E2 229 aa11.04□□□□□ -0.64
TTC28-201ENST00000397906 AREL1O15033 823 aa11.03□□□□□ -0.64
TTC28-201ENST00000397906 XKP51811 444 aa11.03□□□□□ -0.64
TTC28-201ENST00000397906 OLR1P78380 273 aa11.03□□□□□ -0.64
TTC28-201ENST00000397906 PRPF38BQ5VTL8 546 aaKnown RBP11.03□□□□□ -0.64
TTC28-201ENST00000397906 ZNF852Q6ZMS4 543 aa11.03□□□□□ -0.64
TTC28-201ENST00000397906 OR4F6Q8NGB9 312 aa11.03□□□□□ -0.64
TTC28-201ENST00000397906 PDE7BQ9NP56 450 aa11.03□□□□□ -0.64
TTC28-201ENST00000397906 DMAC2Q9NW81 257 aa11.03□□□□□ -0.64
TTC28-201ENST00000397906 MAP2K7O14733 419 aa11.03□□□□□ -0.64
TTC28-201ENST00000397906 PLD2O14939 933 aa11.03□□□□□ -0.64
TTC28-201ENST00000397906 LATO43561 262 aa11.03□□□□□ -0.64
TTC28-201ENST00000397906 SDC2P34741 201 aa11.03□□□□□ -0.64
TTC28-201ENST00000397906 CASP6P55212 293 aa11.03□□□□□ -0.64
TTC28-201ENST00000397906 GMFBP60983 142 aa11.03□□□□□ -0.64
TTC28-201ENST00000397906 TMIGD1Q6UXZ0 262 aa11.03□□□□□ -0.64
TTC28-201ENST00000397906 ADAD1Q96M93 576 aaKnown RBP11.03□□□□□ -0.64
TTC28-201ENST00000397906 OR1I1O60431 355 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms