RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 ELMO1Q92556 727 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 EXOC2Q96KP1 924 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 DDX31Q9H8H2 851 aaKnown RBP5.68□□□□□ -1.5
PTPRD-206ENST00000397617 HPS4Q9NQG7 708 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 SAC3D1A6NKF1 404 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 NEDD8-MDP1E9PL57 170 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 CASC3O15234 703 aaKnown RBP5.67□□□□□ -1.5
PTPRD-206ENST00000397617 JUNP05412 331 aaKnown RBP5.67□□□□□ -1.5
PTPRD-206ENST00000397617 GAAP10253 952 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 SAT1P21673 171 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 ALDH3A2P51648 485 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 HSPA14Q0VDF9 509 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 GAB4Q2WGN9 574 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 LIN52Q52LA3 116 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 YOD1Q5VVQ6 348 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-206ENST00000397617 CCDC80Q76M96 950 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 CLDN19Q8N6F1 224 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 OR5K2Q8NHB8 316 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 MYEOVQ96EZ4 313 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 ZBED6CLQ96FA7 236 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-206ENST00000397617 FAM129BQ96TA1 746 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 THSD1Q9NS62 852 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 NAALAD2Q9Y3Q0 740 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 MMP20O60882 483 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 LILRB5O75023 590 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 RASAL1O95294 804 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 SIX3O95343 332 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-206ENST00000397617 JUNBP17275 347 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-206ENST00000397617 HOXB9P17482 250 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-206ENST00000397617 IMPA1P29218 277 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 DYNC1I2Q13409 638 aaKnown RBP5.67□□□□□ -1.5
PTPRD-206ENST00000397617 KIAA1211LQ6NV74 962 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 C11orf96Q7Z7L8 435 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 FAM129CQ86XR2 697 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 POU5F2Q8N7G0 328 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 OR52B6Q8NGF0 335 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 C17orf80Q9BSJ5 609 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 PRRG3Q9BZD7 231 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 INTS7Q9NVH2 962 aaKnown RBP5.67□□□□□ -1.5
PTPRD-206ENST00000397617 GIN1Q9NXP7 522 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 TRBC2A0A5B9 178 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 DUXAA6NLW8 204 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 C1SP09871 688 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 PTPN6P29350 595 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 FRKP42685 505 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-206ENST00000397617 VMACQ2NL98 169 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 NHSL2Q5HYW2 709 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 IZUMO2Q6UXV1 221 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 GDPGP1Q6ZNW5 385 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 GALNT15Q8N3T1 639 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 TRUB1Q8WWH5 349 aaKnown RBP5.67□□□□□ -1.5
PTPRD-206ENST00000397617 SLC5A11Q8WWX8 675 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 PITX2Q99697 317 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 SGK2Q9HBY8 427 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 TIMMDC1Q9NPL8 285 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 GULP1Q9UBP9 304 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 COLEC10Q9Y6Z7 277 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 CLOCKO15516 846 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 LZTS3O60299 673 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-206ENST00000397617 OR4F21O95013 312 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 TRIM16O95361 564 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 SLC4A1P02730 911 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 MYF6P23409 242 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 PCGF2P35227 344 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 HLCSP50747 726 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 B4GALNT1Q00973 533 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 ADAM15Q13444 863 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 COL13A1Q5TAT6 717 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-206ENST00000397617 REP15Q6BDI9 236 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 GET4Q7L5D6 327 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-206ENST00000397617 CARM1Q86X55 608 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 HPS6Q86YV9 775 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 SFXN5Q8TD22 340 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 HDAC2Q92769 488 aaKnown RBP5.67□□□□□ -1.5
PTPRD-206ENST00000397617 FAM210AQ96ND0 272 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 P2RY13Q9BPV8 354 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 CPPED1Q9BRF8 314 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-206ENST00000397617 TMEM79Q9BSE2 394 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 NDOR1Q9UHB4 597 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 FCARP24071 287 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 KDELR2P33947 212 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 CCR2P41597 374 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 HALP42357 657 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 DGKEP52429 567 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 PPP2R2BQ00005 443 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 EIF2B5Q13144 721 aaKnown RBP5.67□□□□□ -1.5
PTPRD-206ENST00000397617 GRAMD1BQ3KR37 738 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 TMEM130Q8N3G9 435 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 LMNTD1Q8N9Z9 388 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 NELL1Q92832 810 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 TRIT1Q9H3H1 467 aaKnown RBP5.67□□□□□ -1.5
PTPRD-206ENST00000397617 WDR26Q9H7D7 661 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 IL1RAPQ9NPH3 570 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 SEC14L4Q9UDX3 406 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 PCDHB11Q9Y5F2 797 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 ORC6Q9Y5N6 252 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 EPN2O95208 641 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 EOGTQ5NDL2 527 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 C6orf10Q5SRN2 563 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 ATXN7L2Q5T6C5 722 aaPredicted RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms