RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 SAP25Q8TEE9 199 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 ZDHHC1Q8WTX9 485 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 ASB9Q96DX5 294 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 SLC12A9Q9BXP2 914 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 TRIM54Q9BYV2 358 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 CD244Q9BZW8 370 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 TRIT1Q9H3H1 467 aaKnown RBP14.41□□□□□ -0.1
CAPN3-207ENST00000397200 NOL11Q9H8H0 719 aaKnown RBP14.41□□□□□ -0.1
CAPN3-207ENST00000397200 PARVBQ9HBI1 364 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 RIC8BQ9NVN3 520 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 TMEM181Q9P2C4 612 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 CD300AQ9UGN4 299 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 NDUFAF1Q9Y375 327 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 TRBV23OR9-2A0A075B6M9 112 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 KIR2DS5A0A0G2JLQ3 304 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 A0A0G2JNG1 304 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 LNP1A1A4G5 178 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 E7ENX8 843 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 KIR2DS3K7RE56 304 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 MAP3K7O43318 606 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 C1orf105O95561 183 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 ENO2P09104 434 aaPredicted RBP14.41□□□□□ -0.1
CAPN3-207ENST00000397200 HIST1H2AGP0C0S8 130 aaPredicted RBP14.41□□□□□ -0.1
CAPN3-207ENST00000397200 HIST1H2ADP20671 130 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 CAPN3P20807 821 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 BDKRB1P46663 353 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 ZFP36L2P47974 494 aaKnown RBP14.41□□□□□ -0.1
CAPN3-207ENST00000397200 MS4A2Q01362 244 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 SPEM2Q0P670 501 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 RCAN2Q14206 197 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 FLOT2Q14254 428 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 KIR2DS5Q14953 304 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 C18orf21Q32NC0 220 aaPredicted RBP14.41□□□□□ -0.1
CAPN3-207ENST00000397200 MMEL1Q495T6 779 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 DUS1LQ6P1R4 473 aaKnown RBP14.41□□□□□ -0.1
CAPN3-207ENST00000397200 BLOC1S3Q6QNY0 202 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 RETREG3Q86VR2 466 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 GATAD2AQ86YP4 633 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 TRIM48Q8IWZ4 208 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 TBC1D21Q8IYX1 336 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 PHC3Q8NDX5 983 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 OR4F6Q8NGB9 312 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 OR5AR1Q8NGP9 310 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 OR5K2Q8NHB8 316 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 MCOLN3Q8TDD5 553 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 CXorf40BQ96DE9 158 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 HIST1H2AHQ96KK5 128 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 FERD3LQ96RJ6 166 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 HIST1H2AJQ99878 128 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 H2AFJQ9BTM1 129 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 MVB12BQ9H7P6 319 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 SPAG4Q9NPE6 437 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 ABCD2Q9UBJ2 740 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 MYO15AQ9UKN7 3530 aa14.41□□□□□ -0.1
CAPN3-207ENST00000397200 MUC6Q6W4X9 2439 aa14.4□□□□□ -0.1
CAPN3-207ENST00000397200 GPR179Q6PRD1 2367 aa14.4□□□□□ -0.1
CAPN3-207ENST00000397200 ARHGEF33A8MVX0 844 aa14.4□□□□□ -0.1
CAPN3-207ENST00000397200 K7EPI3 171 aa14.4□□□□□ -0.1
CAPN3-207ENST00000397200 CFLARO15519 480 aa14.4□□□□□ -0.1
CAPN3-207ENST00000397200 LRP3O75074 770 aa14.4□□□□□ -0.1
CAPN3-207ENST00000397200 RPSAP08865 295 aaKnown RBP14.4□□□□□ -0.1
CAPN3-207ENST00000397200 ALPPL2P10696 532 aa14.4□□□□□ -0.1
CAPN3-207ENST00000397200 NDUFS1P28331 727 aa14.4□□□□□ -0.1
CAPN3-207ENST00000397200 GGT5P36269 586 aa14.4□□□□□ -0.1
CAPN3-207ENST00000397200 RPIAP49247 311 aa14.4□□□□□ -0.1
CAPN3-207ENST00000397200 FOXM1Q08050 763 aa14.4□□□□□ -0.1
CAPN3-207ENST00000397200 TRAP1Q12931 704 aaKnown RBP14.4□□□□□ -0.1
CAPN3-207ENST00000397200 SF3A2Q15428 464 aaKnown RBP14.4□□□□□ -0.1
CAPN3-207ENST00000397200 PRMT9Q6P2P2 845 aa14.4□□□□□ -0.1
CAPN3-207ENST00000397200 Q6ZSR9 355 aa14.4□□□□□ -0.1
CAPN3-207ENST00000397200 DCUN1D3Q8IWE4 304 aa14.4□□□□□ -0.1
CAPN3-207ENST00000397200 NAGSQ8N159 534 aa14.4□□□□□ -0.1
CAPN3-207ENST00000397200 CDYL2Q8N8U2 506 aa14.4□□□□□ -0.1
CAPN3-207ENST00000397200 SNX31Q8N9S9 440 aa14.4□□□□□ -0.1
CAPN3-207ENST00000397200 PCYOX1LQ8NBM8 494 aa14.4□□□□□ -0.1
CAPN3-207ENST00000397200 FBXO15Q8NCQ5 510 aaPredicted RBP14.4□□□□□ -0.1
CAPN3-207ENST00000397200 PATE1Q8WXA2 126 aa14.4□□□□□ -0.1
CAPN3-207ENST00000397200 ZNF184Q99676 751 aaPredicted RBP14.4□□□□□ -0.1
CAPN3-207ENST00000397200 NTMT1Q9BV86 223 aa14.4□□□□□ -0.1
CAPN3-207ENST00000397200 ZIM2Q9NZV7 527 aa14.4□□□□□ -0.1
CAPN3-207ENST00000397200 ZNF624Q9P2J8 865 aaPredicted RBP14.4□□□□□ -0.1
CAPN3-207ENST00000397200 TRPS1Q9UHF7 1281 aa14.4□□□□□ -0.1
CAPN3-207ENST00000397200 CROTQ9UKG9 612 aa14.4□□□□□ -0.1
CAPN3-207ENST00000397200 PACSIN3Q9UKS6 424 aa14.4□□□□□ -0.1
CAPN3-207ENST00000397200 PDE10AQ9Y233 779 aa14.4□□□□□ -0.1
CAPN3-207ENST00000397200 LRCH1Q9Y2L9 728 aa14.4□□□□□ -0.1
CAPN3-207ENST00000397200 COLEC10Q9Y6Z7 277 aa14.4□□□□□ -0.1
CAPN3-207ENST00000397200 CABIN1Q9Y6J0 2220 aa14.4□□□□□ -0.1
CAPN3-207ENST00000397200 FXYD1O00168 92 aa14.39□□□□□ -0.11
CAPN3-207ENST00000397200 NR5A2O00482 541 aa14.39□□□□□ -0.11
CAPN3-207ENST00000397200 WDR47O94967 919 aa14.39□□□□□ -0.11
CAPN3-207ENST00000397200 VIPP01282 170 aa14.39□□□□□ -0.11
CAPN3-207ENST00000397200 CAPN1P07384 714 aa14.39□□□□□ -0.11
CAPN3-207ENST00000397200 PIK3CGP48736 1102 aa14.39□□□□□ -0.11
CAPN3-207ENST00000397200 HSPA7P48741 367 aa14.39□□□□□ -0.11
CAPN3-207ENST00000397200 HTR6P50406 440 aa14.39□□□□□ -0.11
CAPN3-207ENST00000397200 ERFP50548 548 aa14.39□□□□□ -0.11
CAPN3-207ENST00000397200 SMU1Q2TAY7 513 aa14.39□□□□□ -0.11
CAPN3-207ENST00000397200 SPATS1Q496A3 300 aa14.39□□□□□ -0.11
CAPN3-207ENST00000397200 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms