RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 TNFRSF12AQ9NP84 129 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 UBAP1Q9NZ09 502 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 TMEM9Q9P0T7 183 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 SLAMF8Q9P0V8 285 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 GMPR2Q9P2T1 348 aaKnown RBP6.36□□□□□ -1.39
BDNF-203ENST00000395978 SEC14L3Q9UDX4 400 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 TEKT2Q9UIF3 430 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 EDDM13A0A1B0GTR0 161 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 C7orf72A4D263 438 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 TTC34A8MYJ7 566 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 M0QX08 132 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 LSM1O15116 133 aaKnown RBP6.36□□□□□ -1.39
BDNF-203ENST00000395978 OR1F1O43749 312 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 NUAK1O60285 661 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 DIRAS1O95057 198 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 DLGAP3O95886 979 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 TFAP2AP05549 437 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 ANXA8P13928 327 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 ZNF26P17031 533 aaPredicted RBP6.36□□□□□ -1.39
BDNF-203ENST00000395978 KDELR2P33947 212 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 HSD17B2P37059 387 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 RFX3P48380 749 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 TMED10P49755 219 aaKnown RBP6.36□□□□□ -1.39
BDNF-203ENST00000395978 UGT2B15P54855 530 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 CASP9P55211 416 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 FPGSQ05932 587 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 PON2Q15165 354 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 SF1Q15637 639 aaKnown RBP6.36□□□□□ -1.39
BDNF-203ENST00000395978 MAPK11Q15759 364 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 MEP1AQ16819 746 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 UGT3A2Q3SY77 523 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 SPANXN2Q5MJ10 180 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 ZNF648Q5T619 568 aaPredicted RBP6.36□□□□□ -1.39
BDNF-203ENST00000395978 C10orf62Q5T681 223 aaPredicted RBP6.36□□□□□ -1.39
BDNF-203ENST00000395978 ALG1LQ6GMV1 187 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 GPR153Q6NV75 609 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 SBSNQ6UWP8 590 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 TMIGD1Q6UXZ0 262 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 DEF8Q6ZN54 512 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 PTCHD4Q6ZW05 846 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 CHST15Q7LFX5 561 aaPredicted RBP6.36□□□□□ -1.39
BDNF-203ENST00000395978 SLCO6A1Q86UG4 719 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 TRIM74Q86UV6 250 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 P2RY8Q86VZ1 359 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 OR9A1PQ8NGU1 263 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 TFGQ92734 400 aaPredicted RBP6.36□□□□□ -1.39
BDNF-203ENST00000395978 COL26A1Q96A83 441 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 RAD9AQ99638 391 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 MYOCQ99972 504 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 FNDC11Q9BVV2 318 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 CPEB1Q9BZB8 566 aaKnown RBP6.36□□□□□ -1.39
BDNF-203ENST00000395978 NUAK2Q9H093 628 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 LINC00597Q9H2U6 94 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 ARMC7Q9H6L4 198 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 CAPN10Q9HC96 672 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 TM9SF3Q9HD45 589 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 KRCC1Q9NPI7 259 aaPredicted RBP6.36□□□□□ -1.39
BDNF-203ENST00000395978 GALNT8Q9NY28 637 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 OGDHLQ9ULD0 1010 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.36□□□□□ -1.39
BDNF-203ENST00000395978 DOLKQ9UPQ8 538 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 KNL1Q8NG31 2342 aa6.36□□□□□ -1.39
BDNF-203ENST00000395978 TBC1D3DA0A087WVF3 549 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 TBC1D3IA0A087WXS9 549 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 TBC1D3EA0A087X179 549 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 TBC1D3KA0A087X1G2 549 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 TBC1D3FA6NER0 549 aaPredicted RBP6.35□□□□□ -1.39
BDNF-203ENST00000395978 FADS2P1A8MWK0 482 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 ZNF99A8MXY4 864 aaPredicted RBP6.35□□□□□ -1.39
BDNF-203ENST00000395978 TBC1D3LB9A6J9 549 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 ABCB7O75027 752 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 HPRP00739 348 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 KLK1P06870 262 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 TBC1D3HP0C7X1 549 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 DBTP11182 482 aaKnown RBP6.35□□□□□ -1.39
BDNF-203ENST00000395978 HLA-EP13747 358 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 IL7RP16871 459 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 MYL12AP19105 171 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 ZNF10P21506 573 aaPredicted RBP6.35□□□□□ -1.39
BDNF-203ENST00000395978 CCR7P32248 378 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 OLR1P78380 273 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 IL18R1Q13478 541 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 ZNF846Q147U1 533 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 PDGFRLQ15198 375 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 GTDC1Q4AE62 458 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 ZC3H12BQ5HYM0 836 aaKnown RBP6.35□□□□□ -1.39
BDNF-203ENST00000395978 C6orf141Q5SZD1 244 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 LHX8Q68G74 356 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 TBC1D3GQ6DHY5 549 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 TBC1D3CQ6IPX1 549 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 PSRC1Q6PGN9 363 aaPredicted RBP6.35□□□□□ -1.39
BDNF-203ENST00000395978 ZZZ3Q8IYH5 903 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 ZNF683Q8IZ20 524 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 TBC1D3Q8IZP1 549 aaPredicted RBP6.35□□□□□ -1.39
BDNF-203ENST00000395978 ZNF614Q8N883 585 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 SRFBP1Q8NEF9 429 aaKnown RBP6.35□□□□□ -1.39
BDNF-203ENST00000395978 KBTBD8Q8NFY9 601 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 HDAC2Q92769 488 aaKnown RBP6.35□□□□□ -1.39
BDNF-203ENST00000395978 CXorf40BQ96DE9 158 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 HSH2DQ96JZ2 352 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms