RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 FAM180BQ6P0A1 224 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 TSPYL5Q86VY4 417 aaPredicted RBP13.88□□□□□ -0.19
CLIP2-203ENST00000395060 GALNT12Q8IXK2 581 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 IL17RDQ8NFM7 739 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 OR9Q2Q8NGE9 314 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 TADA1Q96BN2 335 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 FYTTD1Q96QD9 318 aaKnown RBP13.88□□□□□ -0.19
CLIP2-203ENST00000395060 ZIC5Q96T25 663 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 MTERF1Q99551 399 aaKnown RBP13.88□□□□□ -0.19
CLIP2-203ENST00000395060 KATNAL1Q9BW62 490 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 FAM126AQ9BYI3 521 aaPredicted RBP13.88□□□□□ -0.19
CLIP2-203ENST00000395060 NMRK2Q9NPI5 230 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 ARL15Q9NXU5 204 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 TNPO3Q9Y5L0 923 aaKnown RBP13.88□□□□□ -0.19
CLIP2-203ENST00000395060 RALGAPA2Q2PPJ7 1873 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 WWP2O00308 870 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 HAT1O14929 419 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 RPLP0P05388 317 aaKnown RBP13.88□□□□□ -0.19
CLIP2-203ENST00000395060 PAX3P23760 479 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 SSTR4P31391 388 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 KDELR2P33947 212 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 ARMC4Q5T2S8 1044 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 ZNF566Q969W8 418 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 FAM220BPB1ANY3 271 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 J3KTA2 159 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 K7ERQ8 282 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 DNAJB5O75953 348 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 RPL9P32969 192 aaKnown RBP13.88□□□□□ -0.19
CLIP2-203ENST00000395060 PIK3CBP42338 1070 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 SLC15A1P46059 708 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 CDH12P55289 794 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 HSPA14Q0VDF9 509 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 SLAMF1Q13291 335 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 IL18R1Q13478 541 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 DOC2BQ14184 412 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 GANABQ14697 944 aaKnown RBP13.88□□□□□ -0.19
CLIP2-203ENST00000395060 PCBP1Q15365 356 aaKnown RBP eCLIP13.88□□□□□ -0.19
CLIP2-203ENST00000395060 LRRC26Q2I0M4 334 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 TBRG1Q3YBR2 411 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 KLHL17Q6TDP4 642 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 LYPD8Q6UX82 237 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 SLC5A8Q8N695 610 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 TMEM121BQ9BXQ6 578 aaPredicted RBP13.88□□□□□ -0.19
CLIP2-203ENST00000395060 CRISPLD1Q9H336 500 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 TM9SF3Q9HD45 589 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 IMPAD1Q9NX62 359 aa13.88□□□□□ -0.19
CLIP2-203ENST00000395060 FAM227AF5H4B4 570 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 GBAP04062 536 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 ADORA3P0DMS8 318 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 SDC1P18827 310 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 HTR7P34969 479 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 FEN1P39748 380 aaKnown RBP13.87□□□□□ -0.19
CLIP2-203ENST00000395060 DEFA1P59665 94 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 DEFA3P59666 94 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 CDC20Q12834 499 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 TSTA3Q13630 321 aaPredicted RBP13.87□□□□□ -0.19
CLIP2-203ENST00000395060 PROX2Q3B8N5 592 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 CCDC58Q4VC31 144 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 AGAP6Q5VW22 663 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 ATG9BQ674R7 924 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 CLIP3Q96DZ5 547 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 AGAP4Q96P64 663 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 IL4I1Q96RQ9 567 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 NIPSNAP1Q9BPW8 284 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 CD244Q9BZW8 370 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 TLR8Q9NR97 1041 aaKnown RBP13.87□□□□□ -0.19
CLIP2-203ENST00000395060 GIMAP4Q9NUV9 329 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 MS4A12Q9NXJ0 267 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 DHRS7Q9Y394 339 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 NINQ8N4C6 2090 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 CENPXA8MT69 81 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 NT5C1B-RDH14C9J2C7 533 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 CCNDBP1O95273 360 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 ADRA2AP08913 450 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 AKR1A1P14550 325 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 SOX3P41225 446 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 KEAP1Q14145 624 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 PCBP2Q15366 365 aaKnown RBP eCLIP13.87□□□□□ -0.19
CLIP2-203ENST00000395060 ARMCX6Q7L4S7 300 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 ELMOD1Q8N336 334 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 CADM2Q8N3J6 435 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 SH3KBP1Q96B97 665 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 TRPV5Q9NQA5 729 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 SNTG1Q9NSN8 517 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 HCSTQ9UBK5 93 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 MUTYHQ9UIF7 546 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 DUSP12Q9UNI6 340 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 KLHL20Q9Y2M5 609 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 TRPV2Q9Y5S1 764 aa13.87□□□□□ -0.19
CLIP2-203ENST00000395060 CLDN24A6NM45 220 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 SLC28A1O00337 649 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 RHOCP08134 193 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 IFI30P13284 250 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 COX7A2P14406 83 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 GZMMP51124 257 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 CRHR2Q13324 411 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 VMACQ2NL98 169 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 PTCHD3Q3KNS1 767 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 RNF219Q5W0B1 726 aaPredicted RBP13.86□□□□□ -0.19
CLIP2-203ENST00000395060 ADNP2Q6IQ32 1131 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms