RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 SLC6A11P48066 632 aa17.99■□□□□ 0.47
SIL1-202ENST00000394817 CCR3P51677 355 aa17.99■□□□□ 0.47
SIL1-202ENST00000394817 WNT3P56703 355 aa17.99■□□□□ 0.47
SIL1-202ENST00000394817 DDX39BQ13838 428 aaKnown RBP17.99■□□□□ 0.47
SIL1-202ENST00000394817 B3GNT6Q6ZMB0 384 aa17.99■□□□□ 0.47
SIL1-202ENST00000394817 SERPINA11Q86U17 422 aa17.99■□□□□ 0.47
SIL1-202ENST00000394817 ZDHHC13Q8IUH4 622 aa17.99■□□□□ 0.47
SIL1-202ENST00000394817 OFCC1Q8IZS5 231 aa17.99■□□□□ 0.47
SIL1-202ENST00000394817 OR7A2PQ8NGA2 310 aa17.99■□□□□ 0.47
SIL1-202ENST00000394817 ZFYVE19Q96K21 471 aa17.99■□□□□ 0.47
SIL1-202ENST00000394817 DEC1Q9P2X7 70 aa17.99■□□□□ 0.47
SIL1-202ENST00000394817 CIDEBQ9UHD4 219 aa17.99■□□□□ 0.47
SIL1-202ENST00000394817 CEPT1Q9Y6K0 416 aa17.99■□□□□ 0.47
SIL1-202ENST00000394817 OTOL1A6NHN0 477 aaPredicted RBP17.98■□□□□ 0.47
SIL1-202ENST00000394817 SERPINA1P01009 418 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 ADRB3P13945 408 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 CDH2P19022 906 aaPredicted RBP17.98■□□□□ 0.47
SIL1-202ENST00000394817 RPL10P27635 214 aaKnown RBP17.98■□□□□ 0.47
SIL1-202ENST00000394817 PNLIPRP1P54315 467 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 CDH15P55291 814 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 DPTQ07507 201 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 SLC14A1Q13336 389 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.98■□□□□ 0.47
SIL1-202ENST00000394817 DOK6Q6PKX4 331 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 XKR5Q6UX68 686 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 ZNF551Q7Z340 670 aaPredicted RBP17.98■□□□□ 0.47
SIL1-202ENST00000394817 GPR155Q7Z3F1 870 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 TRIM74Q86UV6 250 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 STK32CQ86UX6 486 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 SVOPLQ8N434 492 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 NETO1Q8TDF5 533 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 ADAMTS16Q8TE57 1224 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 SDCCAG3Q96C92 435 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 ASB16Q96NS5 453 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 OR2AG1Q9H205 316 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 MSRAQ9UJ68 235 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 UTS2RQ9UKP6 389 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 KCNE2Q9Y6J6 123 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 MAGEB17A8MXT2 336 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 G3V2T6 193 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 LINC01565O15544 149 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 MYO1DO94832 1006 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 PAPLNO95428 1278 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 THRBP10828 461 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 MYCLP1P12525 358 aaPredicted RBP17.98■□□□□ 0.47
SIL1-202ENST00000394817 COX7A2P14406 83 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 RAET1GQ6H3X3 334 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 SLCO4C1Q6ZQN7 724 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 GET4Q7L5D6 327 aaPredicted RBP17.98■□□□□ 0.47
SIL1-202ENST00000394817 TRAPPC5Q8IUR0 188 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 CLEC4FQ8N1N0 589 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 ZCCHC7Q8N3Z6 543 aaKnown RBP17.98■□□□□ 0.47
SIL1-202ENST00000394817 OR7G3Q8NG95 312 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 ZNF480Q8WV37 535 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 FGF13Q92913 245 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 NEIL2Q969S2 332 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 PPP1R16AQ96I34 528 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 LINC00615Q96LM1 132 aaPredicted RBP17.98■□□□□ 0.47
SIL1-202ENST00000394817 PANX1Q96RD7 426 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 LMAN2LQ9H0V9 348 aa17.98■□□□□ 0.47
SIL1-202ENST00000394817 SOX17Q9H6I2 414 aaPredicted RBP17.98■□□□□ 0.47
SIL1-202ENST00000394817 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.97■□□□□ 0.47
SIL1-202ENST00000394817 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.97■□□□□ 0.47
SIL1-202ENST00000394817 EVPLLA8MZ36 301 aa17.97■□□□□ 0.47
SIL1-202ENST00000394817 FPGTO14772 594 aa17.97■□□□□ 0.47
SIL1-202ENST00000394817 SEC24DO94855 1032 aaPredicted RBP17.97■□□□□ 0.47
SIL1-202ENST00000394817 ETHE1O95571 254 aa17.97■□□□□ 0.47
SIL1-202ENST00000394817 FSHRP23945 695 aa17.97■□□□□ 0.47
SIL1-202ENST00000394817 GPR1P46091 355 aa17.97■□□□□ 0.47
SIL1-202ENST00000394817 ASMTP46597 345 aa17.97■□□□□ 0.47
SIL1-202ENST00000394817 TBPL1P62380 186 aa17.97■□□□□ 0.47
SIL1-202ENST00000394817 RAE1P78406 368 aaKnown RBP17.97■□□□□ 0.47
SIL1-202ENST00000394817 ZNF234Q14588 700 aa17.97■□□□□ 0.47
SIL1-202ENST00000394817 SPIN4Q56A73 249 aa17.97■□□□□ 0.47
SIL1-202ENST00000394817 HUS1BQ8NHY5 278 aa17.97■□□□□ 0.47
SIL1-202ENST00000394817 SMARCD2Q92925 531 aa17.97■□□□□ 0.47
SIL1-202ENST00000394817 ZNF514Q96K75 400 aaPredicted RBP17.97■□□□□ 0.47
SIL1-202ENST00000394817 FAM129BQ96TA1 746 aa17.97■□□□□ 0.47
SIL1-202ENST00000394817 YTHDF1Q9BYJ9 559 aaKnown RBP17.97■□□□□ 0.47
SIL1-202ENST00000394817 TMEM245Q9H330 911 aa17.97■□□□□ 0.47
SIL1-202ENST00000394817 USE1Q9NZ43 259 aa17.97■□□□□ 0.47
SIL1-202ENST00000394817 MAPRE3Q9UPY8 281 aa17.97■□□□□ 0.47
SIL1-202ENST00000394817 MAGED1Q9Y5V3 778 aaPredicted RBP17.97■□□□□ 0.47
SIL1-202ENST00000394817 CLIC1O00299 241 aa17.96■□□□□ 0.47
SIL1-202ENST00000394817 SCAMP2O15127 329 aaKnown RBP17.96■□□□□ 0.47
SIL1-202ENST00000394817 EPN2O95208 641 aa17.96■□□□□ 0.47
SIL1-202ENST00000394817 CCNDBP1O95273 360 aa17.96■□□□□ 0.47
SIL1-202ENST00000394817 PPP2R2BQ00005 443 aa17.96■□□□□ 0.47
SIL1-202ENST00000394817 MYBPC3Q14896 1274 aa17.96■□□□□ 0.47
SIL1-202ENST00000394817 TMEM52BQ4KMG9 183 aa17.96■□□□□ 0.47
SIL1-202ENST00000394817 ADNP2Q6IQ32 1131 aa17.96■□□□□ 0.47
SIL1-202ENST00000394817 CAPN13Q6MZZ7 669 aaPredicted RBP17.96■□□□□ 0.47
SIL1-202ENST00000394817 CAMKMTQ7Z624 323 aa17.96■□□□□ 0.47
SIL1-202ENST00000394817 TMPRSS11BQ86T26 416 aa17.96■□□□□ 0.47
SIL1-202ENST00000394817 ADHFE1Q8IWW8 467 aa17.96■□□□□ 0.47
SIL1-202ENST00000394817 CFAP206Q8IYR0 622 aa17.96■□□□□ 0.47
SIL1-202ENST00000394817 EID3Q8N140 333 aa17.96■□□□□ 0.47
SIL1-202ENST00000394817 PGBD3Q8N328 593 aa17.96■□□□□ 0.47
SIL1-202ENST00000394817 C1orf52Q8N6N3 182 aaKnown RBP17.96■□□□□ 0.47
SIL1-202ENST00000394817 WDR34Q96EX3 536 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms