RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 TGFBR2P37173 567 aa17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 SPAM1P38567 509 aa17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 HNRNPFP52597 415 aaKnown RBP17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 MVKQ03426 396 aa17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 GGTA1PQ4G0N0 100 aa17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 CATSPEREQ5SY80 951 aa17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 HORMAD1Q86X24 394 aa17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 FAM9CQ8IZT9 166 aa17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 AUTS2Q8WXX7 1259 aa17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 PYCR2Q96C36 320 aa17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 ABHD8Q96I13 439 aa17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 APOLD1Q96LR9 279 aa17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 ZNF558Q96NG5 402 aa17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 CCNB1IP1Q9NPC3 277 aa17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 RASSF1Q9NS23 344 aa17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 SIRT5Q9NXA8 310 aa17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 PRKAG2Q9UGJ0 569 aa17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 SAMHD1Q9Y3Z3 626 aaKnown RBP17.79■□□□□ 0.44
PCDHA1-202ENST00000394633 MYO7AQ13402 2215 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 WBP4O75554 376 aaKnown RBP17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 LCKP06239 509 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 LINC00271P0C7V0 271 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 KDELR2P33947 212 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 SEMG2Q02383 582 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 BCL2L1Q07817 233 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 BOP1Q14137 746 aaKnown RBP17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 GPR33Q49SQ1 333 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 PLEKHG7Q6ZR37 379 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 PRSS48Q7RTY5 328 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 LRRC70Q7Z2Q7 622 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 TSPAN33Q86UF1 283 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 TSPYL5Q86VY4 417 aaPredicted RBP17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 PTOV1Q86YD1 416 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 PAF1Q8N7H5 531 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 LGALS12Q96DT0 336 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 SIGLEC11Q96RL6 698 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 REXO4Q9GZR2 422 aaKnown RBP17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 KRT84Q9NSB2 600 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 OR2A25A4D2G3 310 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 FPGTO14772 594 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 PRAMEF4O60810 478 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 EFCAB14O75071 495 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 SEC24AO95486 1093 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 CBSLP0DN79 551 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 AMD1P17707 334 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 MAPK1P28482 360 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 OR1D2P34982 312 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 CBSP35520 551 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 KIR3DL1P43629 444 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 MTAPQ13126 283 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 DUOXA1Q1HG43 343 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 TMEM240Q5SV17 173 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 PRAMEF9Q5VWM5 478 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 KIAA1614Q5VZ46 1190 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 MSANTD1Q6ZTZ1 278 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 UBE2R2Q712K3 238 aaPredicted RBP17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 DSG4Q86SJ6 1040 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 HOMEZQ8IX15 550 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 APCDD1Q8J025 514 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 RNF175Q8N4F7 328 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 BHMTQ93088 406 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 TMEM169Q96HH4 297 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 HSH2DQ96JZ2 352 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 HERC2P3Q9BVR0 1158 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 EBPLQ9BY08 206 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 KIF17Q9P2E2 1029 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 OSGIN1Q9UJX0 560 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 RPS6KA6Q9UK32 745 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 ERVK-11Q9UQG0 969 aa17.78■□□□□ 0.44
PCDHA1-202ENST00000394633 TRANK1O15050 2925 aa17.77■□□□□ 0.44
PCDHA1-202ENST00000394633 C5orf42Q9H799 3197 aa17.77■□□□□ 0.44
PCDHA1-202ENST00000394633 MRPS14O60783 128 aaKnown RBP17.77■□□□□ 0.44
PCDHA1-202ENST00000394633 FGBP02675 491 aa17.77■□□□□ 0.44
PCDHA1-202ENST00000394633 CD36P16671 472 aa17.77■□□□□ 0.44
PCDHA1-202ENST00000394633 EFNA1P20827 205 aaPredicted RBP17.77■□□□□ 0.44
PCDHA1-202ENST00000394633 CCR7P32248 378 aa17.77■□□□□ 0.44
PCDHA1-202ENST00000394633 TRPC1P48995 793 aa17.77■□□□□ 0.44
PCDHA1-202ENST00000394633 TUFMP49411 452 aaKnown RBP17.77■□□□□ 0.44
PCDHA1-202ENST00000394633 PLD1Q13393 1074 aa17.77■□□□□ 0.44
PCDHA1-202ENST00000394633 CDKL4Q5MAI5 379 aa17.77■□□□□ 0.44
PCDHA1-202ENST00000394633 SLC8B1Q6J4K2 584 aa17.77■□□□□ 0.44
PCDHA1-202ENST00000394633 NOXRED1Q6NXP6 359 aa17.77■□□□□ 0.44
PCDHA1-202ENST00000394633 NEK5Q6P3R8 708 aa17.77■□□□□ 0.44
PCDHA1-202ENST00000394633 TPGS1Q6ZTW0 290 aa17.77■□□□□ 0.44
PCDHA1-202ENST00000394633 CBLL1Q75N03 491 aa17.77■□□□□ 0.44
PCDHA1-202ENST00000394633 GPR155Q7Z3F1 870 aa17.77■□□□□ 0.44
PCDHA1-202ENST00000394633 ZSWIM9Q86XI8 627 aa17.77■□□□□ 0.44
PCDHA1-202ENST00000394633 ATG16L2Q8NAA4 619 aa17.77■□□□□ 0.44
PCDHA1-202ENST00000394633 GPR26Q8NDV2 337 aa17.77■□□□□ 0.44
PCDHA1-202ENST00000394633 APH1BQ8WW43 257 aa17.77■□□□□ 0.44
PCDHA1-202ENST00000394633 PANX1Q96RD7 426 aa17.77■□□□□ 0.44
PCDHA1-202ENST00000394633 PITX2Q99697 317 aa17.77■□□□□ 0.44
PCDHA1-202ENST00000394633 C19orf43Q9BQ61 176 aa17.77■□□□□ 0.44
PCDHA1-202ENST00000394633 DPH2Q9BQC3 489 aaPredicted RBP17.77■□□□□ 0.44
PCDHA1-202ENST00000394633 HEPHQ9BQS7 1158 aa17.77■□□□□ 0.44
PCDHA1-202ENST00000394633 CLSTN3Q9BQT9 956 aa17.77■□□□□ 0.44
PCDHA1-202ENST00000394633 STOML2Q9UJZ1 356 aa17.77■□□□□ 0.44
PCDHA1-202ENST00000394633 PNMA8BQ9ULN7 279 aaPredicted RBP17.77■□□□□ 0.44
PCDHA1-202ENST00000394633 TMED5Q9Y3A6 229 aa17.77■□□□□ 0.44
PCDHA1-202ENST00000394633 E9PQ18 207 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms