RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 GABRG2P18507 467 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 RPL10P27635 214 aaKnown RBP6.73□□□□□ -1.33
RTN4-205ENST00000394609 HMOX2P30519 316 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 IGFALSP35858 605 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 GGT5P36269 586 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 HNMTP50135 292 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 AP1S2P56377 157 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 TXNL4AP83876 142 aaKnown RBP6.73□□□□□ -1.33
RTN4-205ENST00000394609 CDKL1Q00532 357 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 NAE1Q13564 534 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 TSTA3Q13630 321 aaPredicted RBP6.73□□□□□ -1.33
RTN4-205ENST00000394609 ABRAXAS2Q15018 415 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 TCEA2Q15560 299 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 MLF2Q15773 248 aaPredicted RBP6.73□□□□□ -1.33
RTN4-205ENST00000394609 CPSF6Q16630 551 aaKnown RBP eCLIP6.73□□□□□ -1.331e-10■□□□□ 11.3
RTN4-205ENST00000394609 CCDC92Q53HC0 331 aaPredicted RBP6.73□□□□□ -1.33
RTN4-205ENST00000394609 KIAA1161Q6NSJ0 714 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 PAOXQ6QHF9 649 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 ZNF852Q6ZMS4 543 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 NCCRP1Q6ZVX7 275 aaPredicted RBP6.73□□□□□ -1.33
RTN4-205ENST00000394609 CHST15Q7LFX5 561 aaPredicted RBP6.73□□□□□ -1.33
RTN4-205ENST00000394609 PATL1Q86TB9 770 aaKnown RBP6.73□□□□□ -1.33
RTN4-205ENST00000394609 LRRTM4Q86VH4 590 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 RASGRP3Q8IV61 690 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 OR9I1Q8NGQ6 314 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 UBTD2Q8WUN7 234 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 SLC35B4Q969S0 331 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 MED8Q96G25 268 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 CLPTM1LQ96KA5 538 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 LINC00615Q96LM1 132 aaPredicted RBP6.73□□□□□ -1.33
RTN4-205ENST00000394609 FOPNLQ96NB1 174 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 PKP4Q99569 1192 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 ACTR8Q9H981 624 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 MRPL40Q9NQ50 206 aaKnown RBP6.73□□□□□ -1.33
RTN4-205ENST00000394609 PRDM6Q9NQX0 595 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 SLC2A4RGQ9NR83 387 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 INTS7Q9NVH2 962 aaKnown RBP6.73□□□□□ -1.33
RTN4-205ENST00000394609 KLQ9UEF7 1012 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 EBF1Q9UH73 591 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 RSL24D1Q9UHA3 163 aaKnown RBP6.73□□□□□ -1.33
RTN4-205ENST00000394609 MMP17Q9ULZ9 603 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 SCML1Q9UN30 329 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 CFAP20Q9Y6A4 193 aaKnown RBP6.73□□□□□ -1.33
RTN4-205ENST00000394609 CEPT1Q9Y6K0 416 aa6.73□□□□□ -1.33
RTN4-205ENST00000394609 PLXNA2O75051 1894 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 TRPM6Q9BX84 2022 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 C17orf113A0A1B0GUU1 675 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 POM121BA6NF01 834 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 PSMD12O00232 456 aaPredicted RBP6.72□□□□□ -1.33
RTN4-205ENST00000394609 OR6B1O95007 311 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 THRAP10827 490 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 CHRNB1P11230 501 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 ACP5P13686 325 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 SLC5A2P31639 672 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 SLC6A12P48065 614 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 DIO3P55073 304 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 PFN3P60673 137 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 PRKG2Q13237 762 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 FASTKQ14296 549 aaKnown RBP6.72□□□□□ -1.33
RTN4-205ENST00000394609 KIF19Q2TAC6 998 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 LEXMQ3ZCV2 418 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 AGKQ53H12 422 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 XKR7Q5GH72 579 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 CDKL4Q5MAI5 379 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 KLHL35Q6PF15 583 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 AGTRAPQ6RW13 159 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 GK5Q6ZS86 529 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 Q6ZSR9 355 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 USP30Q70CQ3 517 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 CCDC80Q76M96 950 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 TCAIMQ8N3R3 496 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 DEFB123Q8N688 67 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 METTL25Q8N6Q8 603 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 HMGCLL1Q8TB92 370 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 ADAMTS16Q8TE57 1224 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 FBXL8Q96CD0 374 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 CCDC138Q96M89 665 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 NRTNQ99748 197 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 C1orf50Q9BV19 199 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 C1QTNF7Q9BXJ2 289 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 NUSAP1Q9BXS6 441 aaKnown RBP6.72□□□□□ -1.33
RTN4-205ENST00000394609 ZDHHC5Q9C0B5 715 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 LMAN1LQ9HAT1 526 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 PHPT1Q9NRX4 125 aaPredicted RBP6.72□□□□□ -1.33
RTN4-205ENST00000394609 RHBDL2Q9NX52 303 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 CCDC167Q9P0B6 97 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 STOX2Q9P2F5 926 aaPredicted RBP6.72□□□□□ -1.33
RTN4-205ENST00000394609 FZD4Q9ULV1 537 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 ZNF232Q9UNY5 417 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 ASF1AQ9Y294 204 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 PLEKHM1Q9Y4G2 1056 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 ST14Q9Y5Y6 855 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 COL6A3P12111 3177 aa6.72□□□□□ -1.33
RTN4-205ENST00000394609 CKAP5Q14008 2032 aa6.71□□□□□ -1.33
RTN4-205ENST00000394609 MAN2B1O00754 1011 aa6.71□□□□□ -1.34
RTN4-205ENST00000394609 PRAMEF4O60810 478 aa6.71□□□□□ -1.34
RTN4-205ENST00000394609 PDE5AO76074 875 aa6.71□□□□□ -1.34
RTN4-205ENST00000394609 BMP10O95393 424 aa6.71□□□□□ -1.34
RTN4-205ENST00000394609 PGM3O95394 542 aa6.71□□□□□ -1.34
RTN4-205ENST00000394609 CLDN9O95484 217 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms