RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 NLE1Q9NVX2 485 aaPredicted RBP5.54□□□□□ -1.52
RFFL-202ENST00000394597 IL36AQ9UHA7 158 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 PSAT1Q9Y617 370 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 AZIN1O14977 448 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 RGS14O43566 566 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 SNNO75324 88 aaPredicted RBP5.54□□□□□ -1.52
RFFL-202ENST00000394597 ALDH1A2O94788 518 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 CDK14O94921 469 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 CLDN7O95471 211 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 F11P03951 625 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 HGFP14210 728 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 ZNF26P17031 533 aaPredicted RBP5.54□□□□□ -1.52
RFFL-202ENST00000394597 POLR2CP19387 275 aaPredicted RBP5.54□□□□□ -1.52
RFFL-202ENST00000394597 PSMD8P48556 350 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 ERVFC1P60507 584 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 DSTNP60981 165 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 NCS1P62166 190 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 NTHL1P78549 312 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 SLC7A9P82251 487 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 IRF9Q00978 393 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 MAB21L1Q13394 359 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 SPCS2Q15005 226 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 NCF4Q15080 339 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 TSC22D1Q15714 1073 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 CLVS2Q5SYC1 327 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 C1orf53Q5VUE5 145 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 BICRALQ6AI39 1079 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 IL27RAQ6UWB1 636 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 KIAA1324Q6UXG2 1013 aaKnown RBP5.54□□□□□ -1.52
RFFL-202ENST00000394597 GPRIN3Q6ZVF9 776 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 CUZD1Q86UP6 607 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 STX12Q86Y82 276 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 KIF18BQ86Y91 864 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 CILP2Q8IUL8 1156 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 CDYL2Q8N8U2 506 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 ANKFN1Q8N957 763 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 FNDC5Q8NAU1 212 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 OR13J1Q8NGT2 312 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 ZNF641Q96N77 438 aaPredicted RBP5.54□□□□□ -1.52
RFFL-202ENST00000394597 SLC46A2Q9BY10 475 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 ABCG8Q9H221 673 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 NKX2-4Q9H2Z4 354 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 CD84Q9UIB8 345 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 LEF1Q9UJU2 399 aaPredicted RBP5.54□□□□□ -1.52
RFFL-202ENST00000394597 NUP50Q9UKX7 468 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 BRCA1P38398 1863 aaKnown RBP5.54□□□□□ -1.52
RFFL-202ENST00000394597 PARP14Q460N5 1801 aa5.54□□□□□ -1.52
RFFL-202ENST00000394597 NPEPPSL1A6NEC2 478 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 POLR1CO15160 346 aaPredicted RBP5.53□□□□□ -1.52
RFFL-202ENST00000394597 NUPL2O15504 423 aaKnown RBP5.53□□□□□ -1.52
RFFL-202ENST00000394597 B4GALT3O60512 393 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 INMTO95050 263 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 DHFRP00374 187 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 OTCP00480 354 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 RPLP0P05388 317 aaKnown RBP5.53□□□□□ -1.52
RFFL-202ENST00000394597 PRKCAP17252 672 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 PKLRP30613 574 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 LEPRP48357 1165 aaKnown RBP5.53□□□□□ -1.52
RFFL-202ENST00000394597 GDI2P50395 445 aaKnown RBP5.53□□□□□ -1.52
RFFL-202ENST00000394597 POU6F2P78424 691 aaPredicted RBP5.53□□□□□ -1.52
RFFL-202ENST00000394597 SEMG2Q02383 582 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 PPP1R8Q12972 351 aaKnown RBP5.53□□□□□ -1.52
RFFL-202ENST00000394597 CDK10Q15131 360 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 INAVAQ3KP66 663 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 TMEM240Q5SV17 173 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 C6orf141Q5SZD1 244 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 ATAD3CQ5T2N8 411 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 PROSER1Q86XN7 944 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 APCDD1Q8J025 514 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 ROPN1LQ96C74 230 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 WRAP53Q9BUR4 548 aaKnown RBP5.53□□□□□ -1.52
RFFL-202ENST00000394597 CRISPLD2Q9H0B8 497 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 KLHL31Q9H511 634 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 TFB2MQ9H5Q4 396 aaKnown RBP5.53□□□□□ -1.52
RFFL-202ENST00000394597 ANKHQ9HCJ1 492 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 ZNF334Q9HCZ1 680 aaPredicted RBP5.53□□□□□ -1.52
RFFL-202ENST00000394597 HCFC1R1Q9NWW0 138 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 SPASTQ9UBP0 616 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 FBXL21Q9UKT6 434 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 CDH7Q9ULB5 785 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 MAPRE3Q9UPY8 281 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 GRIP1Q9Y3R0 1128 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 PCDHGA7Q9Y5G6 932 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 MYO9BQ13459 2157 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 TBC1D3DA0A087WVF3 549 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 TBC1D3IA0A087WXS9 549 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 TBC1D3EA0A087X179 549 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 TBC1D3KA0A087X1G2 549 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 TBC1D3FA6NER0 549 aaPredicted RBP5.53□□□□□ -1.52
RFFL-202ENST00000394597 TBC1D3LB9A6J9 549 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 H3BUI4 141 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 H7C2Y5 167 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 ARPC2O15144 300 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 AXIN1O15169 862 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 SSNA1O43805 119 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 XPNPEP2O43895 674 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 ORC5O43913 435 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 SEC22BO75396 215 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 ERN1O75460 977 aaKnown RBP5.53□□□□□ -1.52
RFFL-202ENST00000394597 TBC1D3HP0C7X1 549 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms