RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 E5RI56 91 aa18.31■□□□□ 0.52
HOXC6-202ENST00000394331 INPPL1O15357 1258 aa18.31■□□□□ 0.52
HOXC6-202ENST00000394331 PCDHGA12O60330 932 aa18.31■□□□□ 0.52
HOXC6-202ENST00000394331 CRCPO75575 148 aa18.31■□□□□ 0.52
HOXC6-202ENST00000394331 SIX3O95343 332 aaPredicted RBP18.31■□□□□ 0.52
HOXC6-202ENST00000394331 HOXB8P17481 243 aaPredicted RBP18.31■□□□□ 0.52
HOXC6-202ENST00000394331 CYP4F3Q08477 520 aa18.31■□□□□ 0.52
HOXC6-202ENST00000394331 PPP1R8Q12972 351 aaKnown RBP18.31■□□□□ 0.52
HOXC6-202ENST00000394331 MS4A13Q5J8X5 152 aa18.31■□□□□ 0.52
HOXC6-202ENST00000394331 MFSD14CQ5VZR4 134 aa18.31■□□□□ 0.52
HOXC6-202ENST00000394331 FAM126BQ8IXS8 530 aa18.31■□□□□ 0.52
HOXC6-202ENST00000394331 TEX26Q8N6G2 289 aa18.31■□□□□ 0.52
HOXC6-202ENST00000394331 ANKRD53Q8N9V6 530 aa18.31■□□□□ 0.52
HOXC6-202ENST00000394331 KLHL5Q96PQ7 755 aa18.31■□□□□ 0.52
HOXC6-202ENST00000394331 HDHD5Q9BXW7 423 aa18.31■□□□□ 0.52
HOXC6-202ENST00000394331 BEX2Q9BXY8 128 aa18.31■□□□□ 0.52
HOXC6-202ENST00000394331 RNF167Q9H6Y7 350 aa18.31■□□□□ 0.52
HOXC6-202ENST00000394331 VNN3Q9NY84 501 aa18.31■□□□□ 0.52
HOXC6-202ENST00000394331 SRRDQ9UH36 339 aa18.31■□□□□ 0.52
HOXC6-202ENST00000394331 F8W810 466 aa18.3■□□□□ 0.52
HOXC6-202ENST00000394331 AKR7A2O43488 359 aa18.3■□□□□ 0.52
HOXC6-202ENST00000394331 ERN1O75460 977 aaKnown RBP18.3■□□□□ 0.52
HOXC6-202ENST00000394331 SCO1O75880 301 aa18.3■□□□□ 0.52
HOXC6-202ENST00000394331 POU3F3P20264 500 aaPredicted RBP18.3■□□□□ 0.52
HOXC6-202ENST00000394331 ALAS2P22557 587 aa18.3■□□□□ 0.52
HOXC6-202ENST00000394331 DSC2Q02487 901 aa18.3■□□□□ 0.52
HOXC6-202ENST00000394331 TMPRSS11AQ6ZMR5 421 aa18.3■□□□□ 0.52
HOXC6-202ENST00000394331 CCDC149Q6ZUS6 474 aa18.3■□□□□ 0.52
HOXC6-202ENST00000394331 GPALPP1Q8IXQ4 340 aa18.3■□□□□ 0.52
HOXC6-202ENST00000394331 ENTHD1Q8IYW4 607 aa18.3■□□□□ 0.52
HOXC6-202ENST00000394331 PYURFQ96I23 114 aa18.3■□□□□ 0.52
HOXC6-202ENST00000394331 NSUN5Q96P11 429 aaKnown RBP18.3■□□□□ 0.52
HOXC6-202ENST00000394331 DCLRE1CQ96SD1 692 aaKnown RBP18.3■□□□□ 0.52
HOXC6-202ENST00000394331 CHCHD6Q9BRQ6 235 aa18.3■□□□□ 0.52
HOXC6-202ENST00000394331 POPDC3Q9HBV1 291 aa18.3■□□□□ 0.52
HOXC6-202ENST00000394331 MRPL39Q9NYK5 338 aaKnown RBP18.3■□□□□ 0.52
HOXC6-202ENST00000394331 OAZ2O95190 189 aa18.3■□□□□ 0.52
HOXC6-202ENST00000394331 HAPLN1P10915 354 aaPredicted RBP18.3■□□□□ 0.52
HOXC6-202ENST00000394331 RAB25P57735 213 aa18.3■□□□□ 0.52
HOXC6-202ENST00000394331 RGS1Q08116 209 aa18.3■□□□□ 0.52
HOXC6-202ENST00000394331 EIF4HQ15056 248 aaKnown RBP18.3■□□□□ 0.52
HOXC6-202ENST00000394331 QPRTQ15274 297 aa18.3■□□□□ 0.52
HOXC6-202ENST00000394331 ZNF367Q7RTV3 350 aa18.3■□□□□ 0.52
HOXC6-202ENST00000394331 UPF1Q92900 1129 aaKnown RBP eCLIP18.3■□□□□ 0.52
HOXC6-202ENST00000394331 ZC3HAV1LQ96H79 300 aaKnown RBP18.3■□□□□ 0.52
HOXC6-202ENST00000394331 HYLS1Q96M11 299 aa18.3■□□□□ 0.52
HOXC6-202ENST00000394331 C1QTNF3Q9BXJ4 246 aa18.3■□□□□ 0.52
HOXC6-202ENST00000394331 SLC23A1Q9UHI7 598 aa18.3■□□□□ 0.52
HOXC6-202ENST00000394331 PRR23AA6NEV1 266 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 FAM220BPB1ANY3 271 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 CREG1O75629 220 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 S1PR4O95977 384 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 MMP2P08253 660 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 FPR1P21462 350 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 C6orf136Q5SQH8 315 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 P3H2Q8IVL5 708 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 ATOH8Q96SQ7 321 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 TFB2MQ9H5Q4 396 aaKnown RBP18.29■□□□□ 0.52
HOXC6-202ENST00000394331 U3KQV3 271 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 TRPM7Q96QT4 1865 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 IGLV3-10A0A075B6K4 115 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 CLCA1A8K7I4 914 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 PROM1O43490 865 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 SERPINI2O75830 405 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 HOXB1P14653 301 aaPredicted RBP18.29■□□□□ 0.52
HOXC6-202ENST00000394331 DNAJA1P31689 397 aaKnown RBP18.29■□□□□ 0.52
HOXC6-202ENST00000394331 CDKN2DP55273 166 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 CREMQ03060 361 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 SETMARQ53H47 684 aaPredicted RBP18.29■□□□□ 0.52
HOXC6-202ENST00000394331 SHEQ5VZ18 495 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 GLB1LQ6UWU2 654 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 DNAJC22Q8N4W6 341 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 PSMG2Q969U7 264 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 GPR137Q96N19 417 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 SPATA9Q9BWV2 254 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 PPA2Q9H2U2 334 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 VAPAQ9P0L0 249 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 HSPB11Q9Y547 144 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 PATJQ8NI35 1801 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 TOR1AO14656 332 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 RPS17P08708 135 aaKnown RBP18.29■□□□□ 0.52
HOXC6-202ENST00000394331 NCF1P14598 390 aaPredicted RBP18.29■□□□□ 0.52
HOXC6-202ENST00000394331 SOX9P48436 509 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 ZNF157P51786 506 aaPredicted RBP18.29■□□□□ 0.52
HOXC6-202ENST00000394331 PCDH1Q08174 1060 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 GPR19Q15760 415 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 SOWAHCQ53LP3 525 aaPredicted RBP18.29■□□□□ 0.52
HOXC6-202ENST00000394331 ALFQ53S48 1182 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 SIRPB2Q5JXA9 342 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 METTL2BQ6P1Q9 378 aaKnown RBP18.29■□□□□ 0.52
HOXC6-202ENST00000394331 PRSS42Q7Z5A4 293 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 RASAL3Q86YV0 1011 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 OR10A6Q8NH74 314 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 C9orf43Q8TAL5 461 aaPredicted RBP18.29■□□□□ 0.52
HOXC6-202ENST00000394331 UBASH3BQ8TF42 649 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 TADA1Q96BN2 335 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 HRASLS5Q96KN8 279 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 KCNS3Q9BQ31 491 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 UQCC2Q9BRT2 126 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 ZNF304Q9HCX3 659 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms