RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 ZNF786Q8N393 782 aa24.74■■□□□ 1.55
SMARCD3-203ENST00000392811 C1orf52Q8N6N3 182 aaKnown RBP24.74■■□□□ 1.55
SMARCD3-203ENST00000392811 LMNTD1Q8N9Z9 388 aa24.74■■□□□ 1.55
SMARCD3-203ENST00000392811 SUSD6Q92537 303 aa24.74■■□□□ 1.55
SMARCD3-203ENST00000392811 METTL2AQ96IZ6 378 aaKnown RBP24.74■■□□□ 1.55
SMARCD3-203ENST00000392811 FPGTO14772 594 aa24.73■■□□□ 1.55
SMARCD3-203ENST00000392811 POP7O75817 140 aaKnown RBP24.73■■□□□ 1.55
SMARCD3-203ENST00000392811 MYO1DO94832 1006 aa24.73■■□□□ 1.55
SMARCD3-203ENST00000392811 C1QCP02747 245 aa24.73■■□□□ 1.55
SMARCD3-203ENST00000392811 ARSFP54793 590 aa24.73■■□□□ 1.55
SMARCD3-203ENST00000392811 TRMT11Q7Z4G4 463 aaKnown RBP24.73■■□□□ 1.55
SMARCD3-203ENST00000392811 TRIML2Q8N7C3 387 aa24.73■■□□□ 1.55
SMARCD3-203ENST00000392811 LINC00615Q96LM1 132 aaPredicted RBP24.73■■□□□ 1.55
SMARCD3-203ENST00000392811 PANX1Q96RD7 426 aa24.73■■□□□ 1.55
SMARCD3-203ENST00000392811 DNAJB9Q9UBS3 223 aa24.73■■□□□ 1.55
SMARCD3-203ENST00000392811 SH2B3Q9UQQ2 575 aa24.73■■□□□ 1.55
SMARCD3-203ENST00000392811 MAGED1Q9Y5V3 778 aaPredicted RBP24.73■■□□□ 1.55
SMARCD3-203ENST00000392811 SEC24DO94855 1032 aaPredicted RBP24.73■■□□□ 1.55
SMARCD3-203ENST00000392811 SERPINA1P01009 418 aa24.73■■□□□ 1.55
SMARCD3-203ENST00000392811 OPRD1P41143 372 aa24.73■■□□□ 1.55
SMARCD3-203ENST00000392811 CDH15P55291 814 aa24.73■■□□□ 1.55
SMARCD3-203ENST00000392811 C21orf58P58505 322 aa24.73■■□□□ 1.55
SMARCD3-203ENST00000392811 TSTA3Q13630 321 aaPredicted RBP24.73■■□□□ 1.55
SMARCD3-203ENST00000392811 KCTD21Q4G0X4 260 aa24.73■■□□□ 1.55
SMARCD3-203ENST00000392811 TANGO2Q6ICL3 276 aa24.73■■□□□ 1.55
SMARCD3-203ENST00000392811 OFCC1Q8IZS5 231 aa24.73■■□□□ 1.55
SMARCD3-203ENST00000392811 SPDYE1Q8NFV5 336 aaPredicted RBP24.73■■□□□ 1.55
SMARCD3-203ENST00000392811 OR8J2Q8NGG1 315 aa24.73■■□□□ 1.55
SMARCD3-203ENST00000392811 ZFP28Q8NHY6 868 aa24.73■■□□□ 1.55
SMARCD3-203ENST00000392811 ZNF514Q96K75 400 aaPredicted RBP24.73■■□□□ 1.55
SMARCD3-203ENST00000392811 SAMD11Q96NU1 681 aa24.73■■□□□ 1.55
SMARCD3-203ENST00000392811 PRM3Q9NNZ6 103 aa24.73■■□□□ 1.55
SMARCD3-203ENST00000392811 COMMD3-BMI1R4GMX3 469 aa24.73■■□□□ 1.55
SMARCD3-203ENST00000392811 CST1P01037 141 aa24.72■■□□□ 1.55
SMARCD3-203ENST00000392811 NPPBP16860 134 aa24.72■■□□□ 1.55
SMARCD3-203ENST00000392811 P2RY2P41231 377 aa24.72■■□□□ 1.55
SMARCD3-203ENST00000392811 ALDH3A2P51648 485 aa24.72■■□□□ 1.55
SMARCD3-203ENST00000392811 ADARB1P78563 741 aaKnown RBP24.72■■□□□ 1.55
SMARCD3-203ENST00000392811 DAG1Q14118 895 aa24.72■■□□□ 1.55
SMARCD3-203ENST00000392811 STARD3Q14849 445 aa24.72■■□□□ 1.55
SMARCD3-203ENST00000392811 CATSPEREQ5SY80 951 aa24.72■■□□□ 1.55
SMARCD3-203ENST00000392811 ANKRD26P1Q6NSI1 321 aa24.72■■□□□ 1.55
SMARCD3-203ENST00000392811 MED27Q6P2C8 311 aa24.72■■□□□ 1.55
SMARCD3-203ENST00000392811 STK32CQ86UX6 486 aa24.72■■□□□ 1.55
SMARCD3-203ENST00000392811 OR9A1PQ8NGU1 263 aa24.72■■□□□ 1.55
SMARCD3-203ENST00000392811 CXorf40AQ8TE69 158 aa24.72■■□□□ 1.55
SMARCD3-203ENST00000392811 PRSS16Q9NQE7 514 aa24.72■■□□□ 1.55
SMARCD3-203ENST00000392811 FAM120CQ9NX05 1096 aaKnown RBP24.72■■□□□ 1.55
SMARCD3-203ENST00000392811 DENND4AQ7Z401 1863 aa24.72■■□□□ 1.55
SMARCD3-203ENST00000392811 C17orf113A0A1B0GUU1 675 aa24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 YY2O15391 372 aa24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 CCR3P51677 355 aa24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 RPS13P62277 151 aaKnown RBP24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 NFE2L1Q14494 772 aa24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 C9orf50Q5SZB4 431 aa24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 PLA2G15Q8NCC3 412 aa24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 CHTF18Q8WVB6 975 aa24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 NMD3Q96D46 503 aaKnown RBP24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 SGPP1Q9BX95 441 aa24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 TRIM4Q9C037 500 aa24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 OBP2AQ9NY56 170 aa24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 HCN2Q9UL51 889 aa24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 ERVK-11Q9UQG0 969 aa24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 BTBD3Q9Y2F9 522 aa24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 EVPLLA8MZ36 301 aa24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 C1QTNF3-AMACRE9PGA6 284 aa24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 CLIC1O00299 241 aa24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 ALPLP05186 524 aa24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 EPHX1P07099 455 aa24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 ANXA4P09525 319 aaPredicted RBP24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 LAMP1P11279 417 aa24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 IST1P53990 364 aa24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 CNTN1Q12860 1018 aa24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 LAPTM5Q13571 262 aa24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 VITQ6UXI7 678 aa24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 USP51Q70EK9 711 aa24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 DSG4Q86SJ6 1040 aa24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 PATL1Q86TB9 770 aaKnown RBP24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 CLECL1Q8IZS7 167 aa24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 GPR156Q8NFN8 814 aa24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 OR2L2Q8NH16 312 aa24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 MAGIXQ9H6Y5 334 aa24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 TRPV4Q9HBA0 871 aa24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 GDE1Q9NZC3 331 aa24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 GPR34Q9UPC5 381 aa24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 TMEM98Q9Y2Y6 226 aa24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 PCYT1BQ9Y5K3 369 aaPredicted RBP24.71■■□□□ 1.55
SMARCD3-203ENST00000392811 SCAMP2O15127 329 aaKnown RBP24.7■■□□□ 1.54
SMARCD3-203ENST00000392811 VEGFDO43915 354 aa24.7■■□□□ 1.54
SMARCD3-203ENST00000392811 ENGP17813 658 aa24.7■■□□□ 1.54
SMARCD3-203ENST00000392811 TUBA4AP68366 448 aa24.7■■□□□ 1.54
SMARCD3-203ENST00000392811 FAM83HQ6ZRV2 1179 aaPredicted RBP24.7■■□□□ 1.54
SMARCD3-203ENST00000392811 ZNF621Q6ZSS3 439 aa24.7■■□□□ 1.54
SMARCD3-203ENST00000392811 SERPINA11Q86U17 422 aa24.7■■□□□ 1.54
SMARCD3-203ENST00000392811 ZDHHC13Q8IUH4 622 aa24.7■■□□□ 1.54
SMARCD3-203ENST00000392811 HIC2Q96JB3 615 aa24.7■■□□□ 1.54
SMARCD3-203ENST00000392811 HDAC8Q9BY41 377 aa24.7■■□□□ 1.54
SMARCD3-203ENST00000392811 DMTF1Q9Y222 760 aa24.7■■□□□ 1.54
SMARCD3-203ENST00000392811 DYRK1BQ9Y463 629 aa24.7■■□□□ 1.54
SMARCD3-203ENST00000392811 PRKAB1Q9Y478 270 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms