RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 FBXL8Q96CD0 374 aa11.31□□□□□ -0.6
RFC4-202ENST00000392481 TSPAN17Q96FV3 270 aa11.31□□□□□ -0.6
RFC4-202ENST00000392481 PRAP1Q96NZ9 151 aa11.31□□□□□ -0.6
RFC4-202ENST00000392481 OR2A5Q96R48 311 aa11.31□□□□□ -0.6
RFC4-202ENST00000392481 RBBP8Q99708 897 aa11.31□□□□□ -0.6
RFC4-202ENST00000392481 ATG10Q9H0Y0 220 aa11.31□□□□□ -0.6
RFC4-202ENST00000392481 SLC25A18Q9H1K4 315 aa11.31□□□□□ -0.6
RFC4-202ENST00000392481 SLC22A11Q9NSA0 550 aa11.31□□□□□ -0.6
RFC4-202ENST00000392481 TMEM184CQ9NVA4 438 aa11.31□□□□□ -0.6
RFC4-202ENST00000392481 CUEDC1Q9NWM3 386 aaPredicted RBP11.31□□□□□ -0.6
RFC4-202ENST00000392481 MTO1Q9Y2Z2 717 aaKnown RBP11.31□□□□□ -0.6
RFC4-202ENST00000392481 NBASA2RRP1 2371 aa11.3□□□□□ -0.6
RFC4-202ENST00000392481 RP1L1Q8IWN7 2480 aaPredicted RBP11.3□□□□□ -0.6
RFC4-202ENST00000392481 B8ZZF3 427 aa11.3□□□□□ -0.6
RFC4-202ENST00000392481 TXNDC9O14530 226 aa11.3□□□□□ -0.6
RFC4-202ENST00000392481 RFPL1O75677 317 aa11.3□□□□□ -0.6
RFC4-202ENST00000392481 ALBP02768 609 aa11.3□□□□□ -0.6
RFC4-202ENST00000392481 NPPBP16860 134 aa11.3□□□□□ -0.6
RFC4-202ENST00000392481 ITGAXP20702 1163 aa11.3□□□□□ -0.6
RFC4-202ENST00000392481 NAB1Q13506 487 aa11.3□□□□□ -0.6
RFC4-202ENST00000392481 COL9A2Q14055 689 aaPredicted RBP11.3□□□□□ -0.6
RFC4-202ENST00000392481 ZNF460Q14592 562 aa11.3□□□□□ -0.6
RFC4-202ENST00000392481 USP10Q14694 798 aaKnown RBP11.3□□□□□ -0.6
RFC4-202ENST00000392481 SSPNQ14714 243 aa11.3□□□□□ -0.6
RFC4-202ENST00000392481 PPP1R3AQ16821 1122 aa11.3□□□□□ -0.6
RFC4-202ENST00000392481 ZXDCQ2QGD7 858 aaPredicted RBP11.3□□□□□ -0.6
RFC4-202ENST00000392481 MUM1Q2TAK8 710 aa11.3□□□□□ -0.6
RFC4-202ENST00000392481 KBTBD12Q3ZCT8 623 aa11.3□□□□□ -0.6
RFC4-202ENST00000392481 GLE1Q53GS7 698 aaKnown RBP11.3□□□□□ -0.6
RFC4-202ENST00000392481 GRTP1Q5TC63 336 aa11.3□□□□□ -0.6
RFC4-202ENST00000392481 FAM69BQ5VUD6 431 aa11.3□□□□□ -0.6
RFC4-202ENST00000392481 CAPN13Q6MZZ7 669 aaPredicted RBP11.3□□□□□ -0.6
RFC4-202ENST00000392481 LCTLQ6UWM7 567 aa11.3□□□□□ -0.6
RFC4-202ENST00000392481 CEP128Q6ZU80 1094 aa11.3□□□□□ -0.6
RFC4-202ENST00000392481 OVCH1Q7RTY7 1134 aa11.3□□□□□ -0.6
RFC4-202ENST00000392481 C17orf64Q86WR6 236 aa11.3□□□□□ -0.6
RFC4-202ENST00000392481 RAB43Q86YS6 212 aa11.3□□□□□ -0.6
RFC4-202ENST00000392481 CTAGE3PQ8IX95 158 aa11.3□□□□□ -0.6
RFC4-202ENST00000392481 CSNK1A1LQ8N752 337 aa11.3□□□□□ -0.6
RFC4-202ENST00000392481 OR2Y1Q8NGV0 311 aa11.3□□□□□ -0.6
RFC4-202ENST00000392481 FBF1Q8TES7 1133 aa11.3□□□□□ -0.6
RFC4-202ENST00000392481 RERGQ96A58 199 aaPredicted RBP11.3□□□□□ -0.6
RFC4-202ENST00000392481 PTERQ96BW5 349 aa11.3□□□□□ -0.6
RFC4-202ENST00000392481 IP6K3Q96PC2 410 aa11.3□□□□□ -0.6
RFC4-202ENST00000392481 GPR22Q99680 433 aa11.3□□□□□ -0.6
RFC4-202ENST00000392481 HAUS8Q9BT25 410 aa11.3□□□□□ -0.6
RFC4-202ENST00000392481 SLC26A1Q9H2B4 701 aa11.3□□□□□ -0.6
RFC4-202ENST00000392481 WDR54Q9H977 334 aa11.3□□□□□ -0.6
RFC4-202ENST00000392481 GPAMQ9HCL2 828 aa11.3□□□□□ -0.6
RFC4-202ENST00000392481 DMGDHQ9UI17 866 aaKnown RBP11.3□□□□□ -0.6
RFC4-202ENST00000392481 IKZF3Q9UKT9 509 aa11.3□□□□□ -0.6
RFC4-202ENST00000392481 PTRH2Q9Y3E5 179 aaKnown RBP11.3□□□□□ -0.6
RFC4-202ENST00000392481 KCNE1BA0A087WTH5 132 aa11.29□□□□□ -0.6
RFC4-202ENST00000392481 MKRN2OSH3BPM6 223 aa11.29□□□□□ -0.6
RFC4-202ENST00000392481 CDC7O00311 574 aa11.29□□□□□ -0.6
RFC4-202ENST00000392481 HAT1O14929 419 aa11.29□□□□□ -0.6
RFC4-202ENST00000392481 CNOT3O75175 753 aaKnown RBP11.29□□□□□ -0.6
RFC4-202ENST00000392481 WISP3O95389 354 aaPredicted RBP11.29□□□□□ -0.6
RFC4-202ENST00000392481 MED26O95402 600 aa11.29□□□□□ -0.6
RFC4-202ENST00000392481 GUCA1CO95843 209 aa11.29□□□□□ -0.6
RFC4-202ENST00000392481 SPRP35270 261 aaPredicted RBP11.29□□□□□ -0.6
RFC4-202ENST00000392481 FOLR3P41439 243 aa11.29□□□□□ -0.6
RFC4-202ENST00000392481 RPS15AP62244 130 aaKnown RBP11.29□□□□□ -0.6
RFC4-202ENST00000392481 CSNK1G2P78368 415 aa11.29□□□□□ -0.6
RFC4-202ENST00000392481 CDKL1Q00532 357 aa11.29□□□□□ -0.6
RFC4-202ENST00000392481 NFATC3Q12968 1075 aa11.29□□□□□ -0.6
RFC4-202ENST00000392481 SLC9A5Q14940 896 aa11.29□□□□□ -0.6
RFC4-202ENST00000392481 GARNL3Q5VVW2 1013 aa11.29□□□□□ -0.6
RFC4-202ENST00000392481 PRMT9Q6P2P2 845 aa11.29□□□□□ -0.6
RFC4-202ENST00000392481 ADAMTSL2Q86TH1 951 aa11.29□□□□□ -0.6
RFC4-202ENST00000392481 PPM1NQ8N819 430 aa11.29□□□□□ -0.6
RFC4-202ENST00000392481 C9orf43Q8TAL5 461 aaPredicted RBP11.29□□□□□ -0.6
RFC4-202ENST00000392481 ANKRD49Q8WVL7 239 aa11.29□□□□□ -0.6
RFC4-202ENST00000392481 ALKBH8Q96BT7 664 aaKnown RBP11.29□□□□□ -0.6
RFC4-202ENST00000392481 THAP11Q96EK4 314 aa11.29□□□□□ -0.6
RFC4-202ENST00000392481 MVB12AQ96EY5 273 aa11.29□□□□□ -0.6
RFC4-202ENST00000392481 ABHD17AQ96GS6 310 aa11.29□□□□□ -0.6
RFC4-202ENST00000392481 C10orf90Q96M02 699 aa11.29□□□□□ -0.6
RFC4-202ENST00000392481 DERL2Q9GZP9 239 aa11.29□□□□□ -0.6
RFC4-202ENST00000392481 TSPYL1Q9H0U9 437 aa11.29□□□□□ -0.6
RFC4-202ENST00000392481 SYNPO2LQ9H987 977 aa11.29□□□□□ -0.6
RFC4-202ENST00000392481 CTNNAL1Q9UBT7 734 aa11.29□□□□□ -0.6
RFC4-202ENST00000392481 MTRF1LQ9UGC7 380 aaKnown RBP11.29□□□□□ -0.6
RFC4-202ENST00000392481 NPEPPSL1A6NEC2 478 aa11.28□□□□□ -0.6
RFC4-202ENST00000392481 STMN1P16949 149 aa11.28□□□□□ -0.6
RFC4-202ENST00000392481 OR1D4P47884 311 aa11.28□□□□□ -0.6
RFC4-202ENST00000392481 ZKSCAN8Q15776 578 aaPredicted RBP11.28□□□□□ -0.6
RFC4-202ENST00000392481 HKDC1Q2TB90 917 aa11.28□□□□□ -0.6
RFC4-202ENST00000392481 COX15Q7KZN9 410 aa11.28□□□□□ -0.6
RFC4-202ENST00000392481 MRGPREQ86SM8 312 aa11.28□□□□□ -0.6
RFC4-202ENST00000392481 ZNF605Q86T29 641 aa11.28□□□□□ -0.6
RFC4-202ENST00000392481 RELL1Q8IUW5 271 aa11.28□□□□□ -0.6
RFC4-202ENST00000392481 PLD3Q8IV08 490 aa11.28□□□□□ -0.6
RFC4-202ENST00000392481 ARHGEF39Q8N4T4 335 aa11.28□□□□□ -0.6
RFC4-202ENST00000392481 ABHD11Q8NFV4 315 aa11.28□□□□□ -0.6
RFC4-202ENST00000392481 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.28□□□□□ -0.6
RFC4-202ENST00000392481 NACC2Q96BF6 587 aa11.28□□□□□ -0.6
RFC4-202ENST00000392481 PYCR2Q96C36 320 aa11.28□□□□□ -0.6
RFC4-202ENST00000392481 CABS1Q96KC9 395 aa11.28□□□□□ -0.6
RFC4-202ENST00000392481 TRIM55Q9BYV6 548 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms