RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 OR4K1Q8NGD4 311 aa6.49□□□□□ -1.37
UBBP1-201ENST00000392399 MDM1Q8TC05 714 aa6.49□□□□□ -1.37
UBBP1-201ENST00000392399 EPS8L3Q8TE67 593 aaKnown RBP6.49□□□□□ -1.37
UBBP1-201ENST00000392399 ALKBH8Q96BT7 664 aaKnown RBP6.49□□□□□ -1.37
UBBP1-201ENST00000392399 PYCR2Q96C36 320 aa6.49□□□□□ -1.37
UBBP1-201ENST00000392399 SCYL1Q96KG9 808 aa6.49□□□□□ -1.37
UBBP1-201ENST00000392399 LRFN5Q96NI6 719 aa6.49□□□□□ -1.37
UBBP1-201ENST00000392399 ZNF285Q96NJ3 590 aa6.49□□□□□ -1.37
UBBP1-201ENST00000392399 CD244Q9BZW8 370 aa6.49□□□□□ -1.37
UBBP1-201ENST00000392399 UNKQ9C0B0 810 aaKnown RBP6.49□□□□□ -1.37
UBBP1-201ENST00000392399 PITHD1Q9GZP4 211 aaPredicted RBP6.49□□□□□ -1.37
UBBP1-201ENST00000392399 MRPL46Q9H2W6 279 aaKnown RBP6.49□□□□□ -1.37
UBBP1-201ENST00000392399 EHD1Q9H4M9 534 aa6.49□□□□□ -1.37
UBBP1-201ENST00000392399 FAM60AQ9NP50 221 aa6.49□□□□□ -1.37
UBBP1-201ENST00000392399 ZNF446Q9NWS9 450 aa6.49□□□□□ -1.37
UBBP1-201ENST00000392399 FAM53CQ9NYF3 392 aa6.49□□□□□ -1.37
UBBP1-201ENST00000392399 WWOXQ9NZC7 414 aa6.49□□□□□ -1.37
UBBP1-201ENST00000392399 SENP1Q9P0U3 644 aa6.49□□□□□ -1.37
UBBP1-201ENST00000392399 PILRAQ9UKJ1 303 aa6.49□□□□□ -1.37
UBBP1-201ENST00000392399 GRID1Q9ULK0 1009 aa6.49□□□□□ -1.37
UBBP1-201ENST00000392399 PLAAQ9Y263 795 aa6.49□□□□□ -1.37
UBBP1-201ENST00000392399 SLC22A14Q9Y267 594 aa6.49□□□□□ -1.37
UBBP1-201ENST00000392399 DYRK1BQ9Y463 629 aa6.49□□□□□ -1.37
UBBP1-201ENST00000392399 TMEM184BQ9Y519 407 aaPredicted RBP6.49□□□□□ -1.37
UBBP1-201ENST00000392399 URB1O60287 2271 aaKnown RBP6.48□□□□□ -1.37
UBBP1-201ENST00000392399 IGKV1-8A0A0C4DH67 115 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 A0A1W2PPM1 405 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 PMS2P1A4D2B8 440 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 FITM1A5D6W6 292 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 NCF1BA6NI72 391 aaPredicted RBP6.48□□□□□ -1.37
UBBP1-201ENST00000392399 NCF1CA8MVU1 366 aaPredicted RBP6.48□□□□□ -1.37
UBBP1-201ENST00000392399 SUPT3HB4E1H0 165 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 TMEM150CB9EJG8 249 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 H3BMH7 237 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 STX16-NPEPL1H3BU86 382 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 H7BY64 318 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 K7EPI3 171 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 UBXN8O00124 270 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 COPEO14579 308 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 STX16O14662 325 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 CLGNO14967 610 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 CPNE3O75131 537 aaKnown RBP6.48□□□□□ -1.37
UBBP1-201ENST00000392399 SMIM24O75264 130 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 GLRA3O75311 464 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 H2AFYO75367 372 aaKnown RBP6.48□□□□□ -1.37
UBBP1-201ENST00000392399 KATNA1O75449 491 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 SUPT3HO75486 399 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 SCRG1O75711 98 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 OR2B3O76000 313 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 STK17BO94768 372 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 WDR47O94967 919 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 KLK3P07288 261 aaPredicted RBP6.48□□□□□ -1.37
UBBP1-201ENST00000392399 CD63P08962 238 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 CCNYL3P0C7X3 344 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 LIPCP11150 499 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 GFAPP14136 432 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 NCF1P14598 390 aaPredicted RBP6.48□□□□□ -1.37
UBBP1-201ENST00000392399 EPB42P16452 691 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 KRT4P19013 534 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 TAC1P20366 129 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 GSTM2P28161 218 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 CRHR1P34998 444 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 CASP2P42575 452 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 GLRBP48167 497 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 PIK3CGP48736 1102 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 CCR8P51685 355 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 NAA20P61599 178 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 CSNK1G2P78368 415 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 SLC18A2Q05940 514 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 PCDH1Q08174 1060 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 CDC16Q13042 620 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 KCNAB1Q14722 419 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 CASP8Q14790 479 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 GRM7Q14831 915 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 SETDB1Q15047 1291 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 GPR19Q15760 415 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 PFKFB4Q16877 469 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 CCDC153Q494R4 210 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 GARNL3Q5VVW2 1013 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 PWWP2BQ6NUJ5 590 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 NXPE4Q6UWF7 544 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 C6orf15Q6UXA7 325 aaPredicted RBP6.48□□□□□ -1.37
UBBP1-201ENST00000392399 SH2D5Q6ZV89 423 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 RNF44Q7L0R7 432 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 LRRC70Q7Z2Q7 622 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 ADCK2Q7Z695 626 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 PROSER1Q86XN7 944 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 FAM20CQ8IXL6 584 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 CYP4X1Q8N118 509 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 ESX1Q8N693 406 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 ZNF655Q8N720 491 aaPredicted RBP6.48□□□□□ -1.37
UBBP1-201ENST00000392399 TTLQ8NG68 377 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 OR1L3Q8NH93 324 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 OR2W6PQ8NHA6 318 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 UBTD2Q8WUN7 234 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 SLC5A11Q8WWX8 675 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 NEIL2Q969S2 332 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 RERGQ96A58 199 aaPredicted RBP6.48□□□□□ -1.37
UBBP1-201ENST00000392399 CCDC126Q96EE4 140 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 SEC16BQ96JE7 1060 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms