RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 NIPSNAP2O75323 286 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 VPS26AO75436 327 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 PAGE1O75459 146 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 ERN1O75460 977 aaKnown RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 GJB3O75712 270 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 RPP40O75818 363 aaKnown RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 SCO1O75880 301 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 WDR47O94967 919 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 DIRAS1O95057 198 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 KCNK5O95279 499 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 TRIM16O95361 564 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 VIPP01282 170 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 C9P02748 559 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 LGALS2P05162 132 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 ITGB1P05556 798 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 CAPN1P07384 714 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 HBQ1P09105 142 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 CCNYL3P0C7X3 344 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 MSL3P1P0C860 447 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 HAPLN1P10915 354 aaPredicted RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 SLC2A3P11169 496 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 PIPP12273 146 aaPredicted RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 NCF1P14598 390 aaPredicted RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 ZNF250P15622 560 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 DDX5P17844 614 aaKnown RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 GPX2P18283 190 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 HK1P19367 917 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 CD72P21854 359 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 CPN2P22792 545 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 PRPH2P23942 346 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 MYL9P24844 172 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 HMGCLP35914 325 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 RPS19P39019 145 aaKnown RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 CRYBB2P43320 205 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 TGM4P49221 684 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 CLK1P49759 484 aaKnown RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 KCNQ1P51787 676 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 MVDP53602 400 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 TPD52P55327 224 aaPredicted RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 CLDN20P56880 219 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 C21orf58P58505 322 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 DEFA1P59665 94 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 DEFA3P59666 94 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 LILRA4P59901 499 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 SRP54P61011 504 aaKnown RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 POU6F2P78424 691 aaPredicted RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 KCNJ10P78508 379 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 MRPS15P82914 257 aaKnown RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 TAGLNQ01995 201 aaKnown RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 CXCL9Q07325 125 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 SLC10A7Q0GE19 358 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 NPRL3Q12980 569 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 ABRAXAS2Q15018 415 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 LARS2Q15031 903 aaKnown RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 EIF4HQ15056 248 aaKnown RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 RPS6KA2Q15349 733 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 TEAD4Q15561 434 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 ZXDCQ2QGD7 858 aaPredicted RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 AP5B1Q2VPB7 878 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 FAM174BQ3ZCQ3 159 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 USP39Q53GS9 565 aaKnown RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 ZNF628Q5EBL2 1059 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 ARMCX4Q5H9R4 360 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 SLC35F1Q5T1Q4 408 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 NBPF12Q5TAG4 269 aaPredicted RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 NDUFAF5Q5TEU4 345 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 WSCD1Q658N2 575 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 NADSYN1Q6IA69 706 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 ZNF770Q6IQ21 691 aaPredicted RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 TIGD7Q6NT04 549 aaPredicted RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 MSANTD2Q6P1R3 559 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 AFTPHQ6ULP2 937 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 SEZ6L2Q6UXD5 910 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 CD300LGQ6UXG3 332 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 ZNF782Q6ZMW2 699 aaPredicted RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 DPY19L3Q6ZPD9 716 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 MSANTD1Q6ZTZ1 278 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 CREB3L2Q70SY1 520 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 CBLL1Q75N03 491 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 UTS2BQ765I0 119 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 EIF3MQ7L2H7 374 aaKnown RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 KDELC2Q7Z4H8 507 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 TRIM46Q7Z4K8 759 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 GOLGA7Q7Z5G4 137 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 WDR53Q7Z5U6 358 aaPredicted RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 VTCN1Q7Z7D3 282 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 GALNT10Q86SR1 603 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 ZNF605Q86T29 641 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 SERPINA11Q86U17 422 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 RASGRP3Q8IV61 690 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 FBXO16Q8IX29 292 aaPredicted RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 FAM126BQ8IXS8 530 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 NIM1KQ8IY84 436 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 UMODL1-AS1Q8N2C9 162 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 SYNPOQ8N3V7 929 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 ZNF366Q8N895 744 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 YIPF7Q8N8F6 280 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 CDYL2Q8N8U2 506 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 ZNF557Q8N988 423 aaPredicted RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 FNDC5Q8NAU1 212 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms