RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 ZNF648Q5T619 568 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC9-201ENST00000389328 C10orf62Q5T681 223 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC9-201ENST00000389328 MAMDC4Q6UXC1 1216 aa12.78□□□□□ -0.36
TRAPPC9-201ENST00000389328 ARHGAP12Q8IWW6 846 aa12.78□□□□□ -0.36
TRAPPC9-201ENST00000389328 PROKR1Q8TCW9 393 aa12.78□□□□□ -0.36
TRAPPC9-201ENST00000389328 MGLLQ99685 303 aa12.78□□□□□ -0.36
TRAPPC9-201ENST00000389328 OSBPL10Q9BXB5 764 aa12.78□□□□□ -0.36
TRAPPC9-201ENST00000389328 CD244Q9BZW8 370 aa12.78□□□□□ -0.36
TRAPPC9-201ENST00000389328 KCNH6Q9H252 994 aa12.78□□□□□ -0.36
TRAPPC9-201ENST00000389328 TNFRSF12AQ9NP84 129 aa12.78□□□□□ -0.36
TRAPPC9-201ENST00000389328 GTF2A1LQ9UNN4 478 aa12.78□□□□□ -0.36
TRAPPC9-201ENST00000389328 USP3Q9Y6I4 520 aa12.78□□□□□ -0.36
TRAPPC9-201ENST00000389328 NSG1P42857 185 aa12.78□□□□□ -0.36
TRAPPC9-201ENST00000389328 GNG2P59768 71 aa12.78□□□□□ -0.36
TRAPPC9-201ENST00000389328 SNX20Q7Z614 316 aa12.78□□□□□ -0.36
TRAPPC9-201ENST00000389328 FAM217AQ8IXS0 508 aa12.78□□□□□ -0.36
TRAPPC9-201ENST00000389328 CDK20Q8IZL9 346 aa12.78□□□□□ -0.36
TRAPPC9-201ENST00000389328 OR6Q1Q8NGQ2 317 aa12.78□□□□□ -0.36
TRAPPC9-201ENST00000389328 KAT2AQ92830 837 aa12.78□□□□□ -0.36
TRAPPC9-201ENST00000389328 MCMBPQ9BTE3 642 aa12.78□□□□□ -0.36
TRAPPC9-201ENST00000389328 TRIT1Q9H3H1 467 aaKnown RBP12.78□□□□□ -0.36
TRAPPC9-201ENST00000389328 FARSBQ9NSD9 589 aaKnown RBP12.78□□□□□ -0.36
TRAPPC9-201ENST00000389328 ANKMY1Q9P2S6 941 aa12.78□□□□□ -0.36
TRAPPC9-201ENST00000389328 PCDHA9Q9Y5H5 950 aa12.78□□□□□ -0.36
TRAPPC9-201ENST00000389328 ADAMTSL3P82987 1691 aa12.77□□□□□ -0.36
TRAPPC9-201ENST00000389328 OR6C75A6NL08 312 aa12.77□□□□□ -0.36
TRAPPC9-201ENST00000389328 PGRMC2O15173 223 aa12.77□□□□□ -0.36
TRAPPC9-201ENST00000389328 EBLN1P0CF75 366 aa12.77□□□□□ -0.36
TRAPPC9-201ENST00000389328 MFSD6LQ8IWD5 586 aa12.77□□□□□ -0.36
TRAPPC9-201ENST00000389328 C10orf53Q8N6V4 93 aa12.77□□□□□ -0.36
TRAPPC9-201ENST00000389328 TP53INP1Q96A56 240 aa12.77□□□□□ -0.36
TRAPPC9-201ENST00000389328 MAGEB10Q96LZ2 347 aaPredicted RBP12.77□□□□□ -0.36
TRAPPC9-201ENST00000389328 OR2B2Q9GZK3 357 aa12.77□□□□□ -0.36
TRAPPC9-201ENST00000389328 ADAMTS5Q9UNA0 930 aa12.77□□□□□ -0.36
TRAPPC9-201ENST00000389328 PCDHGA4Q9Y5G9 962 aa12.77□□□□□ -0.36
TRAPPC9-201ENST00000389328 ACTL7AQ9Y615 435 aa12.77□□□□□ -0.36
TRAPPC9-201ENST00000389328 TLR4O00206 839 aa12.77□□□□□ -0.37
TRAPPC9-201ENST00000389328 NUAK1O60285 661 aa12.77□□□□□ -0.37
TRAPPC9-201ENST00000389328 CLDN7O95471 211 aa12.77□□□□□ -0.37
TRAPPC9-201ENST00000389328 ATF4P18848 351 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC9-201ENST00000389328 ELMSAN1Q6PJG2 1045 aa12.77□□□□□ -0.37
TRAPPC9-201ENST00000389328 POF1BQ8WVV4 589 aa12.77□□□□□ -0.37
TRAPPC9-201ENST00000389328 KLHL6Q8WZ60 621 aa12.77□□□□□ -0.37
TRAPPC9-201ENST00000389328 FEVQ99581 238 aa12.77□□□□□ -0.37
TRAPPC9-201ENST00000389328 RBM38Q9H0Z9 239 aaKnown RBP12.77□□□□□ -0.37
TRAPPC9-201ENST00000389328 PCDHGB6Q9Y5F9 930 aa12.77□□□□□ -0.37
TRAPPC9-201ENST00000389328 CLCA3PQ9Y6N3 262 aa12.77□□□□□ -0.37
TRAPPC9-201ENST00000389328 CYP2A6P11509 494 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC9-201ENST00000389328 PRG2P13727 222 aa12.77□□□□□ -0.37
TRAPPC9-201ENST00000389328 IDUAP35475 653 aa12.77□□□□□ -0.37
TRAPPC9-201ENST00000389328 UAP1L1Q3KQV9 507 aa12.77□□□□□ -0.37
TRAPPC9-201ENST00000389328 KDELC1Q6UW63 502 aa12.77□□□□□ -0.37
TRAPPC9-201ENST00000389328 CADM3Q8N126 398 aa12.77□□□□□ -0.37
TRAPPC9-201ENST00000389328 ZMIZ2Q8NF64 920 aa12.77□□□□□ -0.37
TRAPPC9-201ENST00000389328 UBXN10Q96LJ8 280 aa12.77□□□□□ -0.37
TRAPPC9-201ENST00000389328 LTB4R2Q9NPC1 389 aa12.77□□□□□ -0.37
TRAPPC9-201ENST00000389328 MCUBQ9NWR8 336 aa12.77□□□□□ -0.37
TRAPPC9-201ENST00000389328 IL37Q9NZH6 218 aa12.77□□□□□ -0.37
TRAPPC9-201ENST00000389328 FNIP2Q9P278 1114 aa12.77□□□□□ -0.37
TRAPPC9-201ENST00000389328 DHRS7Q9Y394 339 aa12.77□□□□□ -0.37
TRAPPC9-201ENST00000389328 RPL36Q9Y3U8 105 aaKnown RBP12.77□□□□□ -0.37
TRAPPC9-201ENST00000389328 PTGESO14684 152 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 TLL1O43897 1013 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 COQ9O75208 318 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 URODP06132 367 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 CENPAP49450 140 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 HSPB3Q12988 150 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 E2F2Q14209 437 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 PRSS48Q7RTY5 328 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 DEFB128Q7Z7B8 93 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 TSPYL5Q86VY4 417 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 PEX5LQ8IYB4 626 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 PCSK9Q8NBP7 692 aaKnown RBP12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 OR4K1Q8NGD4 311 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 NFKBIDQ8NI38 313 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 RAET1EQ8TD07 263 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 SGCDQ92629 289 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 EXOSC8Q96B26 276 aaKnown RBP12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 EFHD2Q96C19 240 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 TEX37Q96LM6 180 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 GPR78Q96P69 363 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 SLC35A5Q9BS91 424 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 TTPALQ9BTX7 342 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 ZNF282Q9UDV7 671 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 RIMKLBQ9ULI2 386 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 COL4A1P02462 1669 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 A0A096LPI6 279 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 TRBC2A0A5B9 178 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 APOL3O95236 402 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 RPL17P18621 184 aaKnown RBP12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 MYL9P24844 172 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 PTX3P26022 381 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 C21orf33P30042 268 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 TAS2R41P59536 307 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 RAVER1Q8IY67 606 aaKnown RBP12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 GHDCQ8N2G8 530 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 OR10T2Q8NGX3 314 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 SLC22A17Q8WUG5 538 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 KCTD7Q96MP8 289 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 FCRL4Q96PJ5 515 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms