RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 LAPTM5Q13571 262 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 DGCR6Q14129 220 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 SETMARQ53H47 684 aaPredicted RBP8.68□□□□□ -1.02
GPNMB-202ENST00000381990 CATSPEREQ5SY80 951 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 STEAP3Q658P3 488 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 CPZQ66K79 652 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 ASTLQ6HA08 431 aaPredicted RBP8.68□□□□□ -1.02
GPNMB-202ENST00000381990 IL27RAQ6UWB1 636 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 CERS6Q6ZMG9 384 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 DET1Q7L5Y6 550 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 GRASPQ7Z6J2 395 aaPredicted RBP8.68□□□□□ -1.02
GPNMB-202ENST00000381990 METTL6Q8TCB7 284 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 EID2BQ96D98 161 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 OTUB2Q96DC9 234 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 PYURFQ96I23 114 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 ITPAQ9BY32 194 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 CEP44Q9C0F1 390 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 NDEL1Q9GZM8 345 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 DCSTAMPQ9H295 470 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 ZFYVE1Q9HBF4 777 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 TM9SF3Q9HD45 589 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 FAM50BQ9Y247 325 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 EIF3LQ9Y262 564 aaKnown RBP8.68□□□□□ -1.02
GPNMB-202ENST00000381990 INVSQ9Y283 1065 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 FNDC3AQ9Y2H6 1198 aaKnown RBP8.68□□□□□ -1.02
GPNMB-202ENST00000381990 PCDHB14Q9Y5E9 798 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 OR2A25A4D2G3 310 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 PABPN1LA6NDY0 278 aaKnown RBP8.67□□□□□ -1.02
GPNMB-202ENST00000381990 NPEPPSL1A6NEC2 478 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 PSMD11O00231 422 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 AXIN1O15169 862 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 RAD51BO15315 384 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 DLGAP3O95886 979 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 ESR1P03372 595 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 TYRP14679 529 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 ALDH4A1P30038 563 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 S100A5P33763 92 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 HNF1BP35680 557 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 MAP2K4P45985 399 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 MASP1P48740 699 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 TRPC1P48995 793 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 CLK1P49759 484 aaKnown RBP8.67□□□□□ -1.02
GPNMB-202ENST00000381990 DGKQP52824 942 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 ERVPABLB-1P60509 514 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 IL2P60568 153 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 IFITM2Q01629 132 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 AP5B1Q2VPB7 878 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 RUNDC3AQ59EK9 446 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 HABP4Q5JVS0 413 aaKnown RBP8.67□□□□□ -1.02
GPNMB-202ENST00000381990 KDM4DQ6B0I6 523 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 SCIMPQ6UWF3 145 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 CCDC81Q6ZN84 652 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 USP43Q70EL4 1123 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 TAS2R42Q7RTR8 314 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 TMEM179BQ7Z7N9 219 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 LILRB4Q8NHJ6 448 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 CAPSLQ8WWF8 208 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 HTRA1Q92743 480 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 SLC38A4Q969I6 547 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 NCLNQ969V3 563 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 CCDC97Q96F63 343 aaPredicted RBP8.67□□□□□ -1.02
GPNMB-202ENST00000381990 GPR21Q99679 349 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 NXF2Q9GZY0 626 aaKnown RBP8.67□□□□□ -1.02
GPNMB-202ENST00000381990 LINC00597Q9H2U6 94 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 NEK6Q9HC98 313 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 NUDT4Q9NZJ9 180 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 NDRG4Q9ULP0 352 aaKnown RBP8.67□□□□□ -1.02
GPNMB-202ENST00000381990 SAMD4AQ9UPU9 718 aaKnown RBP8.67□□□□□ -1.02
GPNMB-202ENST00000381990 GMPPBQ9Y5P6 360 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 PRRC2BQ5JSZ5 2229 aaKnown RBP8.67□□□□□ -1.02
GPNMB-202ENST00000381990 PNMA8CA0A1B0GUJ8 204 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 NCF1BA6NI72 391 aaPredicted RBP8.67□□□□□ -1.02
GPNMB-202ENST00000381990 METTL15A6NJ78 407 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 NCF1CA8MVU1 366 aaPredicted RBP8.67□□□□□ -1.02
GPNMB-202ENST00000381990 SLC9A3R1O14745 358 aaPredicted RBP8.67□□□□□ -1.02
GPNMB-202ENST00000381990 OR1I1O60431 355 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 MAN1A2O60476 641 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 FADS2O95864 444 aaKnown RBP8.67□□□□□ -1.02
GPNMB-202ENST00000381990 OTCP00480 354 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 MT-ND2P03891 347 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 CAPN1P07384 714 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 NCF1P14598 390 aaPredicted RBP8.67□□□□□ -1.02
GPNMB-202ENST00000381990 MYOGP15173 224 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 FMO3P31513 532 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 TGFBR2P37173 567 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 CASP3P42574 277 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 PCBP2Q15366 365 aaKnown RBP eCLIP8.67□□□□□ -1.02
GPNMB-202ENST00000381990 CDKN3Q16667 212 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 CTSL3PQ5NE16 218 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 LY6G5CQ5SRR4 150 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 ZNF697Q5TEC3 545 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 LETMD1Q6P1Q0 360 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 CHPFQ8IZ52 775 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 NAT16Q8N8M0 369 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 ATL1Q8WXF7 558 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 KCNJ9Q92806 393 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 ZNF707Q96C28 371 aaPredicted RBP8.67□□□□□ -1.02
GPNMB-202ENST00000381990 ECHDC3Q96DC8 303 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 ERLEC1Q96DZ1 483 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 SAMD11Q96NU1 681 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms