RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 FAM53BQ14153 422 aa12.37□□□□□ -0.43
RPAIN-202ENST00000381208 TLR1Q15399 786 aa12.37□□□□□ -0.43
RPAIN-202ENST00000381208 EIF2S3LQ2VIR3 472 aaKnown RBP12.37□□□□□ -0.43
RPAIN-202ENST00000381208 C4orf17Q53FE4 359 aa12.37□□□□□ -0.43
RPAIN-202ENST00000381208 CRB2Q5IJ48 1285 aa12.37□□□□□ -0.43
RPAIN-202ENST00000381208 ANKRD22Q5VYY1 191 aa12.37□□□□□ -0.43
RPAIN-202ENST00000381208 SUSD1Q6UWL2 747 aa12.37□□□□□ -0.43
RPAIN-202ENST00000381208 ISLR2Q6UXK2 745 aa12.37□□□□□ -0.43
RPAIN-202ENST00000381208 NDUFAF7Q7L592 441 aa12.37□□□□□ -0.43
RPAIN-202ENST00000381208 OR4N4Q8N0Y3 316 aa12.37□□□□□ -0.43
RPAIN-202ENST00000381208 PRR7Q8TB68 274 aa12.37□□□□□ -0.43
RPAIN-202ENST00000381208 DNAJB14Q8TBM8 379 aa12.37□□□□□ -0.43
RPAIN-202ENST00000381208 FAM136AQ96C01 138 aa12.37□□□□□ -0.43
RPAIN-202ENST00000381208 NAT9Q9BTE0 207 aa12.37□□□□□ -0.43
RPAIN-202ENST00000381208 FAM129AQ9BZQ8 928 aa12.37□□□□□ -0.43
RPAIN-202ENST00000381208 TGIF2Q9GZN2 237 aa12.37□□□□□ -0.43
RPAIN-202ENST00000381208 MKKSQ9NPJ1 570 aaPredicted RBP12.37□□□□□ -0.43
RPAIN-202ENST00000381208 C20orf96Q9NUD7 363 aaPredicted RBP12.37□□□□□ -0.43
RPAIN-202ENST00000381208 ASF1BQ9NVP2 202 aa12.37□□□□□ -0.43
RPAIN-202ENST00000381208 PLEKHB1Q9UF11 243 aaPredicted RBP12.37□□□□□ -0.43
RPAIN-202ENST00000381208 TAC3Q9UHF0 121 aa12.37□□□□□ -0.43
RPAIN-202ENST00000381208 MAD1L1Q9Y6D9 718 aa12.37□□□□□ -0.43
RPAIN-202ENST00000381208 NSG1A0A0A6YYJ2 146 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 A0A1W2PQ72 361 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 ANKUB1A6NFN9 424 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 E7ENX8 843 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 SMAPO00193 183 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 CES2O00748 559 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 TTC4O95801 387 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 ICAM2P13598 275 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 TERF1P54274 439 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 EMP2P54851 167 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 FOXL2P58012 376 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 TAP2Q03519 686 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 CTBP1Q13363 440 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 MRPL49Q13405 166 aaKnown RBP12.36□□□□□ -0.43
RPAIN-202ENST00000381208 ZNF169Q14929 603 aaPredicted RBP12.36□□□□□ -0.43
RPAIN-202ENST00000381208 NR6A1Q15406 480 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 THEMIS2Q5TEJ8 643 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 ATG9BQ674R7 924 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 TTC27Q6P3X3 843 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 RIPOR1Q6ZS17 1223 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 SHISA6Q6ZSJ9 500 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 CUZD1Q86UP6 607 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 DENND6AQ8IWF6 608 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 PARP9Q8IXQ6 854 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 PALM2Q8IXS6 379 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 PPIL6Q8IXY8 311 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 KBTBD2Q8IY47 623 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 METTL27Q8N6F8 245 aaPredicted RBP12.36□□□□□ -0.43
RPAIN-202ENST00000381208 NAT8LQ8N9F0 302 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.36□□□□□ -0.43
RPAIN-202ENST00000381208 ST6GALNAC3Q8NDV1 305 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 MCOLN3Q8TDD5 553 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 ACTRT1Q8TDG2 376 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 ZNF480Q8WV37 535 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 THAP11Q96EK4 314 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 C19orf60Q96EN9 201 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 THOC3Q96J01 351 aaKnown RBP12.36□□□□□ -0.43
RPAIN-202ENST00000381208 C10orf90Q96M02 699 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 OR2A5Q96R48 311 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 DRC3Q9H069 523 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 RIC8BQ9NVN3 520 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 GALPQ9UBC7 116 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 TRPC4Q9UBN4 977 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 TSR3Q9UJK0 312 aaKnown RBP12.36□□□□□ -0.43
RPAIN-202ENST00000381208 FBXO5Q9UKT4 447 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 RUVBL1Q9Y265 456 aaKnown RBP12.36□□□□□ -0.43
RPAIN-202ENST00000381208 SLC5A6Q9Y289 635 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 NEU2Q9Y3R4 380 aa12.36□□□□□ -0.43
RPAIN-202ENST00000381208 PCSK5Q92824 1860 aa12.35□□□□□ -0.43
RPAIN-202ENST00000381208 IGKV1-8A0A0C4DH67 115 aa12.35□□□□□ -0.43
RPAIN-202ENST00000381208 IDSB3KWA1 339 aa12.35□□□□□ -0.43
RPAIN-202ENST00000381208 KIF5CO60282 957 aa12.35□□□□□ -0.43
RPAIN-202ENST00000381208 SEMA7AO75326 666 aa12.35□□□□□ -0.43
RPAIN-202ENST00000381208 SYF2O95926 243 aaKnown RBP12.35□□□□□ -0.43
RPAIN-202ENST00000381208 MYBL2P10244 700 aa12.35□□□□□ -0.43
RPAIN-202ENST00000381208 CCND1P24385 295 aa12.35□□□□□ -0.43
RPAIN-202ENST00000381208 SLC26A3P40879 764 aa12.35□□□□□ -0.43
RPAIN-202ENST00000381208 SLC1A2P43004 574 aa12.35□□□□□ -0.43
RPAIN-202ENST00000381208 AVPR1BP47901 424 aa12.35□□□□□ -0.43
RPAIN-202ENST00000381208 SP140Q13342 867 aa12.35□□□□□ -0.43
RPAIN-202ENST00000381208 MFAP5Q13361 173 aa12.35□□□□□ -0.43
RPAIN-202ENST00000381208 RPUSD3Q6P087 351 aaKnown RBP12.35□□□□□ -0.43
RPAIN-202ENST00000381208 KIAA0408Q6ZU52 694 aa12.35□□□□□ -0.43
RPAIN-202ENST00000381208 ADCK2Q7Z695 626 aa12.35□□□□□ -0.43
RPAIN-202ENST00000381208 PCGF5Q86SE9 256 aa12.35□□□□□ -0.43
RPAIN-202ENST00000381208 CD200R1Q8TD46 325 aa12.35□□□□□ -0.43
RPAIN-202ENST00000381208 WNT2BQ93097 391 aa12.35□□□□□ -0.43
RPAIN-202ENST00000381208 CCDC138Q96M89 665 aa12.35□□□□□ -0.43
RPAIN-202ENST00000381208 C5orf34Q96MH7 638 aa12.35□□□□□ -0.43
RPAIN-202ENST00000381208 CCDC177Q9NQR7 707 aaPredicted RBP12.35□□□□□ -0.43
RPAIN-202ENST00000381208 FBXO6Q9NRD1 293 aaPredicted RBP12.35□□□□□ -0.43
RPAIN-202ENST00000381208 TMEM184CQ9NVA4 438 aa12.35□□□□□ -0.43
RPAIN-202ENST00000381208 PCYOX1Q9UHG3 505 aa12.35□□□□□ -0.43
RPAIN-202ENST00000381208 TRMT6Q9UJA5 497 aaKnown RBP12.35□□□□□ -0.43
RPAIN-202ENST00000381208 NOVA2Q9UNW9 492 aaKnown RBP12.35□□□□□ -0.43
RPAIN-202ENST00000381208 MED16Q9Y2X0 877 aa12.35□□□□□ -0.43
RPAIN-202ENST00000381208 KCNE1BA0A087WTH5 132 aa12.34□□□□□ -0.43
RPAIN-202ENST00000381208 DYTNA2CJ06 578 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms