RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 SERPINA11Q86U17 422 aa22.33■■□□□ 1.16
VPS16-201ENST00000380443 TRIM74Q86UV6 250 aa22.33■■□□□ 1.16
VPS16-201ENST00000380443 FIG4Q92562 907 aa22.33■■□□□ 1.16
VPS16-201ENST00000380443 RSPH9Q9H1X1 276 aaPredicted RBP22.33■■□□□ 1.16
VPS16-201ENST00000380443 FAM149AA5PLN7 773 aa22.32■■□□□ 1.16
VPS16-201ENST00000380443 RPN2P04844 631 aa22.32■■□□□ 1.16
VPS16-201ENST00000380443 NPPBP16860 134 aa22.32■■□□□ 1.16
VPS16-201ENST00000380443 KELP23276 732 aa22.32■■□□□ 1.16
VPS16-201ENST00000380443 MERTKQ12866 999 aa22.32■■□□□ 1.16
VPS16-201ENST00000380443 PHC3Q8NDX5 983 aa22.32■■□□□ 1.16
VPS16-201ENST00000380443 VPS37AQ8NEZ2 397 aa22.32■■□□□ 1.16
VPS16-201ENST00000380443 FAM162AQ96A26 154 aa22.32■■□□□ 1.16
VPS16-201ENST00000380443 RAD51AP1Q96B01 352 aa22.32■■□□□ 1.16
VPS16-201ENST00000380443 MTERF1Q99551 399 aaKnown RBP22.32■■□□□ 1.16
VPS16-201ENST00000380443 HAUS8Q9BT25 410 aa22.32■■□□□ 1.16
VPS16-201ENST00000380443 GMEB1Q9Y692 573 aa22.32■■□□□ 1.16
VPS16-201ENST00000380443 PLK4O00444 970 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 MYF6P23409 242 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 PHEXP78562 749 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 ARHGAP19Q14CB8 494 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 ANXA8L1Q5VT79 327 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 ANKRD54Q6NXT1 300 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 ERICH5Q6P6B1 374 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 XKR5Q6UX68 686 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 GCNT7Q6ZNI0 430 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 C11orf96Q7Z7L8 435 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 PDZD3Q86UT5 571 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 AMZ2Q86W34 360 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 LRRC56Q8IYG6 542 aaPredicted RBP22.31■■□□□ 1.16
VPS16-201ENST00000380443 EID3Q8N140 333 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 OXR1Q8N573 874 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 HUS1BQ8NHY5 278 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 NEIL2Q969S2 332 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 ADI1Q9BV57 179 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 SPATA9Q9BWV2 254 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 ZDHHC5Q9C0B5 715 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 OR52A5Q9H2C5 316 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 IKZF5Q9H5V7 419 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 CCDC177Q9NQR7 707 aaPredicted RBP22.31■■□□□ 1.16
VPS16-201ENST00000380443 DCAF13Q9NV06 445 aaKnown RBP22.31■■□□□ 1.16
VPS16-201ENST00000380443 STON1Q9Y6Q2 735 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 COL4A3Q01955 1670 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 MAGEB17A8MXT2 336 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 H6PDO95479 791 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 COX7A2P14406 83 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 C5AR1P21730 350 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 PPIBP23284 216 aaKnown RBP22.31■■□□□ 1.16
VPS16-201ENST00000380443 CAMK2GQ13555 558 aaPredicted RBP22.31■■□□□ 1.16
VPS16-201ENST00000380443 UGT8Q16880 541 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 ITPRIPL2Q3MIP1 535 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 EGFLAMQ63HQ2 1017 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 OR4F3Q6IEY1 312 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 TMPRSS11BQ86T26 416 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 LRRTM4Q86VH4 590 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 SFTPA1Q8IWL2 248 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 PGBD3Q8N328 593 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 FOXJ1Q92949 421 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 EGLN2Q96KS0 407 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 REXO4Q9GZR2 422 aaKnown RBP22.31■■□□□ 1.16
VPS16-201ENST00000380443 LIMD1Q9UGP4 676 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 BTNL2Q9UIR0 455 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 HCN2Q9UL51 889 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 MYRFQ9Y2G1 1151 aa22.31■■□□□ 1.16
VPS16-201ENST00000380443 CREG1O75629 220 aa22.3■■□□□ 1.16
VPS16-201ENST00000380443 PCNAP12004 261 aa22.3■■□□□ 1.16
VPS16-201ENST00000380443 HPCAL1P37235 193 aa22.3■■□□□ 1.16
VPS16-201ENST00000380443 RPL3P39023 403 aaKnown RBP22.3■■□□□ 1.16
VPS16-201ENST00000380443 PIK3CBP42338 1070 aa22.3■■□□□ 1.16
VPS16-201ENST00000380443 TNFRSF4P43489 277 aa22.3■■□□□ 1.16
VPS16-201ENST00000380443 RPS9P46781 194 aaKnown RBP22.3■■□□□ 1.16
VPS16-201ENST00000380443 TAP2Q03519 686 aa22.3■■□□□ 1.16
VPS16-201ENST00000380443 APOFQ13790 326 aa22.3■■□□□ 1.16
VPS16-201ENST00000380443 DDX39BQ13838 428 aaKnown RBP22.3■■□□□ 1.16
VPS16-201ENST00000380443 MYBPC3Q14896 1274 aa22.3■■□□□ 1.16
VPS16-201ENST00000380443 CST6Q15828 149 aa22.3■■□□□ 1.16
VPS16-201ENST00000380443 SLC36A3Q495N2 470 aa22.3■■□□□ 1.16
VPS16-201ENST00000380443 FOXB2Q5VYV0 432 aa22.3■■□□□ 1.16
VPS16-201ENST00000380443 LCTLQ6UWM7 567 aa22.3■■□□□ 1.16
VPS16-201ENST00000380443 DNAJC14Q6Y2X3 702 aaPredicted RBP22.3■■□□□ 1.16
VPS16-201ENST00000380443 MAFAQ8NHW3 353 aaPredicted RBP22.3■■□□□ 1.16
VPS16-201ENST00000380443 SLC5A11Q8WWX8 675 aa22.3■■□□□ 1.16
VPS16-201ENST00000380443 INPP5KQ9BT40 448 aa22.3■■□□□ 1.16
VPS16-201ENST00000380443 IGFLR1Q9H665 355 aa22.3■■□□□ 1.16
VPS16-201ENST00000380443 SMPD3Q9NY59 655 aaPredicted RBP22.3■■□□□ 1.16
VPS16-201ENST00000380443 DNAJB9Q9UBS3 223 aa22.3■■□□□ 1.16
VPS16-201ENST00000380443 AK5Q9Y6K8 562 aa22.3■■□□□ 1.16
VPS16-201ENST00000380443 AP1M2Q9Y6Q5 423 aa22.3■■□□□ 1.16
VPS16-201ENST00000380443 DLGAP1O14490 977 aa22.29■■□□□ 1.16
VPS16-201ENST00000380443 FPGTO14772 594 aa22.29■■□□□ 1.16
VPS16-201ENST00000380443 SCAMP2O15127 329 aaKnown RBP22.29■■□□□ 1.16
VPS16-201ENST00000380443 SCN2BO60939 215 aa22.29■■□□□ 1.16
VPS16-201ENST00000380443 LRATO95237 230 aa22.29■■□□□ 1.16
VPS16-201ENST00000380443 HPRP00739 348 aa22.29■■□□□ 1.16
VPS16-201ENST00000380443 TIA1P31483 386 aaKnown RBP eCLIP22.29■■□□□ 1.16
VPS16-201ENST00000380443 ATAT1Q5SQI0 421 aa22.29■■□□□ 1.16
VPS16-201ENST00000380443 IYDQ6PHW0 289 aa22.29■■□□□ 1.16
VPS16-201ENST00000380443 NXPE4Q6UWF7 544 aa22.29■■□□□ 1.16
VPS16-201ENST00000380443 DCUN1D3Q8IWE4 304 aa22.29■■□□□ 1.16
VPS16-201ENST00000380443 RDH12Q96NR8 316 aa22.29■■□□□ 1.16
VPS16-201ENST00000380443 PHF12Q96QT6 1004 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms