RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 HIST2H2ACQ16777 129 aaPredicted RBP19.14■□□□□ 0.65
PDLIM5-205ENST00000380180 PGS1Q32NB8 556 aa19.14■□□□□ 0.65
PDLIM5-205ENST00000380180 TMEM31Q5JXX7 168 aa19.14■□□□□ 0.65
PDLIM5-205ENST00000380180 HIST2H2AA3Q6FI13 130 aa19.14■□□□□ 0.65
PDLIM5-205ENST00000380180 LCN8Q6JVE9 175 aa19.14■□□□□ 0.65
PDLIM5-205ENST00000380180 FERD3LQ96RJ6 166 aa19.14■□□□□ 0.65
PDLIM5-205ENST00000380180 VCX3BQ9H321 246 aa19.14■□□□□ 0.65
PDLIM5-205ENST00000380180 GOLGA4Q13439 2230 aaKnown RBP19.14■□□□□ 0.65
PDLIM5-205ENST00000380180 TCRBV21S2A2A0A5A6 115 aa19.13■□□□□ 0.65
PDLIM5-205ENST00000380180 AQP12BA6NM10 295 aa19.13■□□□□ 0.65
PDLIM5-205ENST00000380180 ARPC2O15144 300 aa19.13■□□□□ 0.65
PDLIM5-205ENST00000380180 CDH1P12830 882 aa19.13■□□□□ 0.65
PDLIM5-205ENST00000380180 PRPS1L1P21108 318 aa19.13■□□□□ 0.65
PDLIM5-205ENST00000380180 RAE1P78406 368 aaKnown RBP19.13■□□□□ 0.65
PDLIM5-205ENST00000380180 SFSWAPQ12872 951 aaKnown RBP19.13■□□□□ 0.65
PDLIM5-205ENST00000380180 MLF2Q15773 248 aaPredicted RBP19.13■□□□□ 0.65
PDLIM5-205ENST00000380180 OGFRL1Q5TC84 451 aaPredicted RBP19.13■□□□□ 0.65
PDLIM5-205ENST00000380180 AQP12AQ8IXF9 295 aa19.13■□□□□ 0.65
PDLIM5-205ENST00000380180 C1orf52Q8N6N3 182 aaKnown RBP19.13■□□□□ 0.65
PDLIM5-205ENST00000380180 ZNF740Q8NDX6 193 aa19.13■□□□□ 0.65
PDLIM5-205ENST00000380180 OR8J3Q8NGG0 315 aa19.13■□□□□ 0.65
PDLIM5-205ENST00000380180 CHTF18Q8WVB6 975 aa19.13■□□□□ 0.65
PDLIM5-205ENST00000380180 CANT1Q8WVQ1 401 aa19.13■□□□□ 0.65
PDLIM5-205ENST00000380180 HHIPQ96QV1 700 aa19.13■□□□□ 0.65
PDLIM5-205ENST00000380180 HAUS8Q9BT25 410 aa19.13■□□□□ 0.65
PDLIM5-205ENST00000380180 MMP17Q9ULZ9 603 aa19.13■□□□□ 0.65
PDLIM5-205ENST00000380180 ZNF839A8K0R7 811 aa19.13■□□□□ 0.65
PDLIM5-205ENST00000380180 FOXE1O00358 373 aaPredicted RBP19.13■□□□□ 0.65
PDLIM5-205ENST00000380180 SCAMP1O15126 338 aa19.13■□□□□ 0.65
PDLIM5-205ENST00000380180 AKAP10O43572 662 aa19.13■□□□□ 0.65
PDLIM5-205ENST00000380180 MYO1DO94832 1006 aa19.13■□□□□ 0.65
PDLIM5-205ENST00000380180 GABRG2P18507 467 aa19.13■□□□□ 0.65
PDLIM5-205ENST00000380180 HSD17B2P37059 387 aa19.13■□□□□ 0.65
PDLIM5-205ENST00000380180 LAPTM5Q13571 262 aa19.13■□□□□ 0.65
PDLIM5-205ENST00000380180 CCDC85BQ15834 202 aaPredicted RBP19.13■□□□□ 0.65
PDLIM5-205ENST00000380180 CYP2A13Q16696 494 aa19.13■□□□□ 0.65
PDLIM5-205ENST00000380180 SFT2D3Q587I9 215 aa19.13■□□□□ 0.65
PDLIM5-205ENST00000380180 MSRB3Q8IXL7 192 aa19.13■□□□□ 0.65
PDLIM5-205ENST00000380180 TRIM15Q9C019 465 aa19.13■□□□□ 0.65
PDLIM5-205ENST00000380180 MUC13Q9H3R2 512 aa19.13■□□□□ 0.65
PDLIM5-205ENST00000380180 FGF22Q9HCT0 170 aa19.13■□□□□ 0.65
PDLIM5-205ENST00000380180 SERHLQ9NQF3 203 aa19.13■□□□□ 0.65
PDLIM5-205ENST00000380180 SLC25A37Q9NYZ2 338 aa19.13■□□□□ 0.65
PDLIM5-205ENST00000380180 CA5BQ9Y2D0 317 aa19.13■□□□□ 0.65
PDLIM5-205ENST00000380180 SNRNP200O75643 2136 aaKnown RBP19.13■□□□□ 0.65
PDLIM5-205ENST00000380180 TMEM265A0A087WTH1 108 aa19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 PRR19A6NJB7 356 aa19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 MTHFD1P11586 935 aaKnown RBP19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 NCK1P16333 377 aa19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 HTR1EP28566 365 aa19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 CLCA4Q14CN2 919 aa19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 DNAJC14Q6Y2X3 702 aaPredicted RBP19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 GPR180Q86V85 440 aa19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 ANKRD46Q86W74 232 aa19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 PDSS2Q86YH6 399 aa19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 TMEM126BQ8IUX1 230 aa19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 TMEM102Q8N9M5 508 aaPredicted RBP19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 GPR156Q8NFN8 814 aa19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 SCARF2Q96GP6 870 aaPredicted RBP19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 PHF7Q9BWX1 381 aaPredicted RBP19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 UBE2ZQ9H832 354 aaPredicted RBP19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 SLC6A13Q9NSD5 602 aa19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 TAC3Q9UHF0 121 aa19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 SNX13Q9Y5W8 968 aa19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 H0Y8X5 98 aa19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 PEX1O43933 1283 aa19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 KCNJ13O60928 360 aa19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 B3GALT4O96024 378 aa19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 TGFB1P01137 390 aa19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 IDSP22304 550 aa19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 OR4D2P58180 307 aa19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 TFF2Q03403 129 aa19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 GRAMD1BQ3KR37 738 aa19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 SPIN4Q56A73 249 aa19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 C10orf62Q5T681 223 aaPredicted RBP19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 FAM129CQ86XR2 697 aa19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 SH3KBP1Q96B97 665 aa19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 PAIP1Q9H074 479 aaKnown RBP19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 KCNH6Q9H252 994 aa19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 RMND5AQ9H871 391 aa19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 IMP3Q9NV31 184 aaKnown RBP19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 SPATA7Q9P0W8 599 aa19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 NDRG2Q9UN36 371 aaKnown RBP19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 PCDHB14Q9Y5E9 798 aa19.12■□□□□ 0.65
PDLIM5-205ENST00000380180 FANCMQ8IYD8 2048 aa19.11■□□□□ 0.65
PDLIM5-205ENST00000380180 PRSS38A1L453 326 aa19.11■□□□□ 0.65
PDLIM5-205ENST00000380180 PRMT3O60678 531 aa19.11■□□□□ 0.65
PDLIM5-205ENST00000380180 ANXA4P09525 319 aaPredicted RBP19.11■□□□□ 0.65
PDLIM5-205ENST00000380180 FXNQ16595 210 aa19.11■□□□□ 0.65
PDLIM5-205ENST00000380180 UGT8Q16880 541 aa19.11■□□□□ 0.65
PDLIM5-205ENST00000380180 GTDC1Q4AE62 458 aa19.11■□□□□ 0.65
PDLIM5-205ENST00000380180 RUNDC3AQ59EK9 446 aa19.11■□□□□ 0.65
PDLIM5-205ENST00000380180 OR4F3Q6IEY1 312 aa19.11■□□□□ 0.65
PDLIM5-205ENST00000380180 C17orf64Q86WR6 236 aa19.11■□□□□ 0.65
PDLIM5-205ENST00000380180 TRIM69Q86WT6 500 aa19.11■□□□□ 0.65
PDLIM5-205ENST00000380180 FLCNQ8NFG4 579 aa19.11■□□□□ 0.65
PDLIM5-205ENST00000380180 OR7A2PQ8NGA2 310 aa19.11■□□□□ 0.65
PDLIM5-205ENST00000380180 CDC26Q8NHZ8 85 aa19.11■□□□□ 0.65
PDLIM5-205ENST00000380180 HMGB4Q8WW32 186 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms