RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 MUTYHQ9UIF7 546 aa20.85■□□□□ 0.93
TRIM54-202ENST00000380075 PPT2Q9UMR5 302 aa20.85■□□□□ 0.93
TRIM54-202ENST00000380075 MYO10Q9HD67 2058 aa20.85■□□□□ 0.93
TRIM54-202ENST00000380075 OTOL1A6NHN0 477 aaPredicted RBP20.84■□□□□ 0.93
TRIM54-202ENST00000380075 NFATC1O95644 943 aa20.84■□□□□ 0.93
TRIM54-202ENST00000380075 TACR1P25103 407 aa20.84■□□□□ 0.93
TRIM54-202ENST00000380075 PTPN6P29350 595 aa20.84■□□□□ 0.93
TRIM54-202ENST00000380075 GZMMP51124 257 aa20.84■□□□□ 0.93
TRIM54-202ENST00000380075 LSAMPQ13449 338 aa20.84■□□□□ 0.93
TRIM54-202ENST00000380075 EIF4HQ15056 248 aaKnown RBP20.84■□□□□ 0.93
TRIM54-202ENST00000380075 PLA2G4EQ3MJ16 856 aa20.84■□□□□ 0.93
TRIM54-202ENST00000380075 PYCR3Q53H96 274 aa20.84■□□□□ 0.93
TRIM54-202ENST00000380075 TMEM220Q6QAJ8 160 aa20.84■□□□□ 0.93
TRIM54-202ENST00000380075 GCNT7Q6ZNI0 430 aa20.84■□□□□ 0.93
TRIM54-202ENST00000380075 SVOPLQ8N434 492 aa20.84■□□□□ 0.93
TRIM54-202ENST00000380075 OR8D1Q8WZ84 308 aa20.84■□□□□ 0.93
TRIM54-202ENST00000380075 SDCCAG3Q96C92 435 aa20.84■□□□□ 0.93
TRIM54-202ENST00000380075 HPS4Q9NQG7 708 aa20.84■□□□□ 0.93
TRIM54-202ENST00000380075 DCAF13Q9NV06 445 aaKnown RBP20.84■□□□□ 0.93
TRIM54-202ENST00000380075 PCDHGA11Q9Y5H2 935 aa20.84■□□□□ 0.93
TRIM54-202ENST00000380075 EDDM13A0A1B0GTR0 161 aa20.83■□□□□ 0.93
TRIM54-202ENST00000380075 RFXANKO14593 260 aa20.83■□□□□ 0.93
TRIM54-202ENST00000380075 RECQL5O94762 991 aaPredicted RBP20.83■□□□□ 0.93
TRIM54-202ENST00000380075 MYO1DO94832 1006 aa20.83■□□□□ 0.93
TRIM54-202ENST00000380075 MT-ND1P03886 318 aa20.83■□□□□ 0.93
TRIM54-202ENST00000380075 GNAO1P09471 354 aa20.83■□□□□ 0.93
TRIM54-202ENST00000380075 ARSFP54793 590 aa20.83■□□□□ 0.93
TRIM54-202ENST00000380075 EPS8Q12929 822 aa20.83■□□□□ 0.93
TRIM54-202ENST00000380075 DYNC1I2Q13409 638 aaKnown RBP20.83■□□□□ 0.93
TRIM54-202ENST00000380075 NAE1Q13564 534 aa20.83■□□□□ 0.93
TRIM54-202ENST00000380075 DAG1Q14118 895 aa20.83■□□□□ 0.93
TRIM54-202ENST00000380075 DOC2AQ14183 400 aa20.83■□□□□ 0.93
TRIM54-202ENST00000380075 E2F2Q14209 437 aa20.83■□□□□ 0.93
TRIM54-202ENST00000380075 PGS1Q32NB8 556 aa20.83■□□□□ 0.93
TRIM54-202ENST00000380075 GTDC1Q4AE62 458 aa20.83■□□□□ 0.93
TRIM54-202ENST00000380075 SLC44A4Q53GD3 710 aa20.83■□□□□ 0.93
TRIM54-202ENST00000380075 C10orf62Q5T681 223 aaPredicted RBP20.83■□□□□ 0.93
TRIM54-202ENST00000380075 B3GNT6Q6ZMB0 384 aa20.83■□□□□ 0.93
TRIM54-202ENST00000380075 USP51Q70EK9 711 aa20.83■□□□□ 0.93
TRIM54-202ENST00000380075 SYT12Q8IV01 421 aa20.83■□□□□ 0.93
TRIM54-202ENST00000380075 ADAMTS16Q8TE57 1224 aa20.83■□□□□ 0.93
TRIM54-202ENST00000380075 TMBIM1Q969X1 311 aa20.83■□□□□ 0.93
TRIM54-202ENST00000380075 FAM120CQ9NX05 1096 aaKnown RBP20.83■□□□□ 0.93
TRIM54-202ENST00000380075 CREG1O75629 220 aa20.83■□□□□ 0.92
TRIM54-202ENST00000380075 ALBP02768 609 aa20.83■□□□□ 0.92
TRIM54-202ENST00000380075 SRFP11831 508 aa20.83■□□□□ 0.92
TRIM54-202ENST00000380075 CD22P20273 847 aa20.83■□□□□ 0.92
TRIM54-202ENST00000380075 ADARB1P78563 741 aaKnown RBP20.83■□□□□ 0.92
TRIM54-202ENST00000380075 MYBPC3Q14896 1274 aa20.83■□□□□ 0.92
TRIM54-202ENST00000380075 PDGFRLQ15198 375 aa20.83■□□□□ 0.92
TRIM54-202ENST00000380075 C12orf40Q86WS4 652 aa20.83■□□□□ 0.92
TRIM54-202ENST00000380075 ZDHHC13Q8IUH4 622 aa20.83■□□□□ 0.92
TRIM54-202ENST00000380075 ZNF786Q8N393 782 aa20.83■□□□□ 0.92
TRIM54-202ENST00000380075 ZFP28Q8NHY6 868 aa20.83■□□□□ 0.92
TRIM54-202ENST00000380075 ZNF514Q96K75 400 aaPredicted RBP20.83■□□□□ 0.92
TRIM54-202ENST00000380075 TBCDQ9BTW9 1192 aa20.83■□□□□ 0.92
TRIM54-202ENST00000380075 EVPLLA8MZ36 301 aa20.82■□□□□ 0.92
TRIM54-202ENST00000380075 E7EQ34 232 aa20.82■□□□□ 0.92
TRIM54-202ENST00000380075 H3BM21 787 aa20.82■□□□□ 0.92
TRIM54-202ENST00000380075 IMPA1P29218 277 aa20.82■□□□□ 0.92
TRIM54-202ENST00000380075 PREPP48147 710 aa20.82■□□□□ 0.92
TRIM54-202ENST00000380075 ACSM2AQ08AH3 577 aa20.82■□□□□ 0.92
TRIM54-202ENST00000380075 DUOXA1Q1HG43 343 aa20.82■□□□□ 0.92
TRIM54-202ENST00000380075 HNRNPA1L2Q32P51 320 aaKnown RBP20.82■□□□□ 0.92
TRIM54-202ENST00000380075 POM121L1PQ3SYA9 428 aa20.82■□□□□ 0.92
TRIM54-202ENST00000380075 ZNF658BQ4V348 819 aaPredicted RBP20.82■□□□□ 0.92
TRIM54-202ENST00000380075 ACSM2BQ68CK6 577 aa20.82■□□□□ 0.92
TRIM54-202ENST00000380075 SERPINA11Q86U17 422 aa20.82■□□□□ 0.92
TRIM54-202ENST00000380075 EID3Q8N140 333 aa20.82■□□□□ 0.92
TRIM54-202ENST00000380075 OR8J2Q8NGG1 315 aa20.82■□□□□ 0.92
TRIM54-202ENST00000380075 FBXO30Q8TB52 745 aa20.82■□□□□ 0.92
TRIM54-202ENST00000380075 PPP1R16AQ96I34 528 aa20.82■□□□□ 0.92
TRIM54-202ENST00000380075 PKP4Q99569 1192 aa20.82■□□□□ 0.92
TRIM54-202ENST00000380075 DUSP12Q9UNI6 340 aa20.82■□□□□ 0.92
TRIM54-202ENST00000380075 NPC1O15118 1278 aa20.81■□□□□ 0.92
TRIM54-202ENST00000380075 SLC34A2O95436 690 aa20.81■□□□□ 0.92
TRIM54-202ENST00000380075 ASMTP46597 345 aa20.81■□□□□ 0.92
TRIM54-202ENST00000380075 RUNX3Q13761 415 aa20.81■□□□□ 0.92
TRIM54-202ENST00000380075 PON2Q15165 354 aa20.81■□□□□ 0.92
TRIM54-202ENST00000380075 FNDC3BQ53EP0 1204 aaKnown RBP20.81■□□□□ 0.92
TRIM54-202ENST00000380075 IER5LQ5T953 404 aa20.81■□□□□ 0.92
TRIM54-202ENST00000380075 TMEM214Q6NUQ4 689 aaKnown RBP20.81■□□□□ 0.92
TRIM54-202ENST00000380075 ENPP6Q6UWR7 440 aa20.81■□□□□ 0.92
TRIM54-202ENST00000380075 ZNF366Q8N895 744 aa20.81■□□□□ 0.92
TRIM54-202ENST00000380075 NCLNQ969V3 563 aa20.81■□□□□ 0.92
TRIM54-202ENST00000380075 REPS1Q96D71 796 aa20.81■□□□□ 0.92
TRIM54-202ENST00000380075 MED8Q96G25 268 aa20.81■□□□□ 0.92
TRIM54-202ENST00000380075 INPP5KQ9BT40 448 aa20.81■□□□□ 0.92
TRIM54-202ENST00000380075 SLC6A13Q9NSD5 602 aa20.81■□□□□ 0.92
TRIM54-202ENST00000380075 FAM8A1Q9UBU6 413 aa20.81■□□□□ 0.92
TRIM54-202ENST00000380075 ITM2BQ9Y287 266 aa20.81■□□□□ 0.92
TRIM54-202ENST00000380075 KCNE2Q9Y6J6 123 aa20.81■□□□□ 0.92
TRIM54-202ENST00000380075 A0A1B0GTW7 788 aa20.81■□□□□ 0.92
TRIM54-202ENST00000380075 KRT87PA6NCN2 255 aa20.81■□□□□ 0.92
TRIM54-202ENST00000380075 CCDC160A6NGH7 325 aa20.81■□□□□ 0.92
TRIM54-202ENST00000380075 SLC16A8O95907 504 aa20.81■□□□□ 0.92
TRIM54-202ENST00000380075 CST1P01037 141 aa20.81■□□□□ 0.92
TRIM54-202ENST00000380075 ALPLP05186 524 aa20.81■□□□□ 0.92
TRIM54-202ENST00000380075 BDKRB1P46663 353 aa20.81■□□□□ 0.92
TRIM54-202ENST00000380075 DPTQ07507 201 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms