RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 FAM174AQ8TBP5 190 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 NACC2Q96BF6 587 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 ZC3HAV1LQ96H79 300 aaKnown RBP6.35□□□□□ -1.39
NEDD9-202ENST00000379446 CEP295NLQ96MC4 621 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 UTP23Q9BRU9 249 aaKnown RBP6.35□□□□□ -1.39
NEDD9-202ENST00000379446 ROGDIQ9GZN7 287 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 XYLT2Q9H1B5 865 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 ALG9Q9H6U8 611 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 CAB39LQ9H9S4 337 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 PRDM8Q9NQV8 689 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 THAP10Q9P2Z0 257 aaPredicted RBP6.35□□□□□ -1.39
NEDD9-202ENST00000379446 EPS15L1Q9UBC2 864 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 SLC7A8Q9UHI5 535 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 AURKCQ9UQB9 309 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 MTF2Q9Y483 593 aaPredicted RBP6.35□□□□□ -1.39
NEDD9-202ENST00000379446 C2CD4BA6NLJ0 364 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 J3QRK9 145 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 MATN2O00339 956 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 COQ9O75208 318 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 PDE9AO76083 593 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 SNX4O95219 450 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 BPGMP07738 259 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 CPA3P15088 417 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 MAGP20916 626 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 CCNOP22674 350 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 CCNCP24863 283 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 HLA-FP30511 346 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 HPCAL1P37235 193 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 ENTPD1P49961 510 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 RAD23AP54725 363 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 LSAMPQ13449 338 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 NFATC4Q14934 902 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 ZNF585AQ6P3V2 769 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 TXNDC11Q6PKC3 985 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 FAM9CQ8IZT9 166 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 SLC7A5P1Q8MH63 180 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 CADM2Q8N3J6 435 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 OR14L1PQ8NHC6 308 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 STAG3L4Q8TBR4 150 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 HM13Q8TCT9 377 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 RIT1Q92963 219 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 GLYATL1Q969I3 302 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 FBXL8Q96CD0 374 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 ADI1Q9BV57 179 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 CCDC90BQ9GZT6 254 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 TMEM168Q9H0V1 697 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 SDHAF3Q9NRP4 125 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 SPATA7Q9P0W8 599 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 CLEC1BQ9P126 229 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.35□□□□□ -1.39
NEDD9-202ENST00000379446 BRWD3Q6RI45 1802 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 KIR2DS5A0A0G2JLQ3 304 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 A0A0G2JNG1 304 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 KIR2DS3K7RE56 304 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 ITM2AO43736 263 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 GDF9O60383 454 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 SORBS2O94875 1100 aaKnown RBP6.35□□□□□ -1.39
NEDD9-202ENST00000379446 KRT75O95678 551 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 GSRP00390 522 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 FAM58BPP0C7Q3 252 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 DNAJB1P25685 340 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 MSX1P28360 303 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 EIF2S3P41091 472 aaKnown RBP6.35□□□□□ -1.39
NEDD9-202ENST00000379446 EIF2DP41214 584 aaKnown RBP6.35□□□□□ -1.39
NEDD9-202ENST00000379446 GRIA4P48058 902 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 KCNK10P57789 538 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 ZNF267Q14586 743 aaPredicted RBP6.35□□□□□ -1.39
NEDD9-202ENST00000379446 KIR2DS5Q14953 304 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 NEDD8Q15843 81 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 VPS26BQ4G0F5 336 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 TCTE1Q5JU00 501 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 PLD3Q8IV08 490 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 P3H2Q8IVL5 708 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 CSNK1A1LQ8N752 337 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 NIPA2Q8N8Q9 360 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 SLC43A3Q8NBI5 491 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 TMEM178AQ8NBL3 297 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 PIWIL2Q8TC59 973 aaKnown RBP6.35□□□□□ -1.39
NEDD9-202ENST00000379446 TRMT2BQ96GJ1 504 aaKnown RBP6.35□□□□□ -1.39
NEDD9-202ENST00000379446 NGBQ9NPG2 151 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 MRPL40Q9NQ50 206 aaKnown RBP6.35□□□□□ -1.39
NEDD9-202ENST00000379446 DDX28Q9NUL7 540 aaKnown RBP6.35□□□□□ -1.39
NEDD9-202ENST00000379446 SYBUQ9NX95 663 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 STMN3Q9NZ72 180 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 UPB1Q9UBR1 384 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 TNPO3Q9Y5L0 923 aaKnown RBP6.35□□□□□ -1.39
NEDD9-202ENST00000379446 SNX13Q9Y5W8 968 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 IRAK3Q9Y616 596 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 COPG1Q9Y678 874 aaKnown RBP6.35□□□□□ -1.39
NEDD9-202ENST00000379446 TEX264Q9Y6I9 313 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 NAV3Q8IVL0 2385 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 MAN1A2O60476 641 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 LATS1O95835 1130 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 NR2F1P10589 423 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 BCKDHBP21953 392 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 CHRNA4P43681 627 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 SUOXP51687 545 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 CDH15P55291 814 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 RAB15P59190 212 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 EEF1A2Q05639 463 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms