RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 OR52J3Q8NH60 311 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 L3HYPDHQ96EM0 354 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 CMTM7Q96FZ5 175 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 PKMYT1Q99640 499 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 FNDC11Q9BVV2 318 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 C20orf27Q9GZN8 174 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 COQ10BQ9H8M1 238 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 PNPLA3Q9NST1 481 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 TRPS1Q9UHF7 1281 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 TMED5Q9Y3A6 229 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 KNTC1P50748 2209 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 TRIOBPQ9H2D6 2365 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 FAM92AA1XBS5 289 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 RNGTTO60942 597 aaKnown RBP13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 SERPINA1P01009 418 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 SMIM11AP58511 58 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 DOC2AQ14183 400 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 DEFB119Q8N690 84 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 FAM210AQ96ND0 272 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 SORBS2O94875 1100 aaKnown RBP13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 C5AR1P21730 350 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 CSNK1DP48730 415 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 MTTPP55157 894 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 TAS2R50P59544 299 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 MINDY4Q4G0A6 757 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 USP39Q53GS9 565 aaKnown RBP13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 NRSN1Q8IZ57 195 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 RGMAQ96B86 450 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 LRCH3Q96II8 777 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 ZNF282Q9UDV7 671 aaPredicted RBP13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 ATP6V1HQ9UI12 483 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 CLEC4EQ9ULY5 219 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 DGKBQ9Y6T7 804 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 HMX2A2RU54 273 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 SLC16A5O15375 505 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 PDPK1O15530 556 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 MFN2O95140 757 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 ENGP17813 658 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 CPN2P22792 545 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 RPS3P23396 243 aaKnown RBP eCLIP13.75□□□□□ -0.213e-7■■■■■ 39.2
SHROOM1-203ENST00000378679 RPS9P46781 194 aaKnown RBP13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 SUOXP51687 545 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 PPP1R8Q12972 351 aaKnown RBP13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 KCNC3Q14003 757 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 PON2Q15165 354 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 SLC14A2Q15849 920 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 NOXRED1Q6NXP6 359 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 RFLNAQ6ZTI6 216 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 ARMCX6Q7L4S7 300 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 ZDHHC21Q8IVQ6 265 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 ZCCHC7Q8N3Z6 543 aaKnown RBP13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 TTLQ8NG68 377 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 OR5AK3PQ8NH89 298 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 DNAJB8Q8NHS0 232 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 MZB1Q8WU39 189 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 SMAD5Q99717 465 aaKnown RBP13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 LMAN2LQ9H0V9 348 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 EURLQ9NYK6 297 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 LATO43561 262 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 PRDX3P30048 256 aaKnown RBP13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 SOX9P48436 509 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 GALNT1Q10472 559 aaPredicted RBP13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 SHHQ15465 462 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 TYSND1Q2T9J0 566 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 TANGO2Q6ICL3 276 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 ASRGL1Q7L266 308 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 TICAM1Q8IUC6 712 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 CYP4Z2PQ8N1L4 340 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 TRIB3Q96RU7 358 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 PDP1Q9P0J1 537 aaPredicted RBP13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 IKZF3Q9UKT9 509 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 DLGAP4Q9Y2H0 992 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 PRSS51A0A1B0GVH4 220 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 NDUFS4O43181 175 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 PDYNP01213 254 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 IGLV3-27P01718 113 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 T-ENOLP0DO92 83 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 BCKDHAP12694 445 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 FOXA1P55317 472 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 RHDQ02161 417 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 C1DQ13901 141 aaKnown RBP13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 TYW3Q6IPR3 259 aaKnown RBP13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 ANKRD26P1Q6NSI1 321 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 HIPK1Q86Z02 1210 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 GPR65Q8IYL9 337 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 CAPSLQ8WWF8 208 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 FATE1Q969F0 183 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 AURKBQ96GD4 344 aaPredicted RBP13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 SLC17A9Q9BYT1 436 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 KCNK13Q9HB14 408 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 IL37Q9NZH6 218 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 TTC3P53804 2025 aa13.75□□□□□ -0.21
SHROOM1-203ENST00000378679 TCRBV21S2A2A0A5A6 115 aa13.74□□□□□ -0.21
SHROOM1-203ENST00000378679 BOLA2-SMG1P6H3BVE0 249 aa13.74□□□□□ -0.21
SHROOM1-203ENST00000378679 TNFP01375 233 aa13.74□□□□□ -0.21
SHROOM1-203ENST00000378679 HOXB6P17509 224 aaKnown RBP13.74□□□□□ -0.21
SHROOM1-203ENST00000378679 ALDH4A1P30038 563 aa13.74□□□□□ -0.21
SHROOM1-203ENST00000378679 GJA4P35212 333 aa13.74□□□□□ -0.21
SHROOM1-203ENST00000378679 CDC42P60953 191 aa13.74□□□□□ -0.21
SHROOM1-203ENST00000378679 TBPL1P62380 186 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms