RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 STK32CQ86UX6 486 aa19.55■□□□□ 0.72
VSX1-202ENST00000376709 MMAAQ8IVH4 418 aaKnown RBP19.55■□□□□ 0.72
VSX1-202ENST00000376709 OR7G3Q8NG95 312 aa19.55■□□□□ 0.72
VSX1-202ENST00000376709 NETO1Q8TDF5 533 aa19.55■□□□□ 0.72
VSX1-202ENST00000376709 FAM129BQ96TA1 746 aa19.55■□□□□ 0.72
VSX1-202ENST00000376709 THG1LQ9NWX6 298 aaKnown RBP19.55■□□□□ 0.72
VSX1-202ENST00000376709 ATXN10Q9UBB4 475 aa19.55■□□□□ 0.72
VSX1-202ENST00000376709 DNAJB9Q9UBS3 223 aa19.55■□□□□ 0.72
VSX1-202ENST00000376709 DMTF1Q9Y222 760 aa19.55■□□□□ 0.72
VSX1-202ENST00000376709 CEP290O15078 2479 aa19.54■□□□□ 0.72
VSX1-202ENST00000376709 NUP214P35658 2090 aaPredicted RBP19.54■□□□□ 0.72
VSX1-202ENST00000376709 LILRB5O75023 590 aa19.54■□□□□ 0.72
VSX1-202ENST00000376709 ALBP02768 609 aa19.54■□□□□ 0.72
VSX1-202ENST00000376709 GZMMP51124 257 aa19.54■□□□□ 0.72
VSX1-202ENST00000376709 ALDH3A2P51648 485 aa19.54■□□□□ 0.72
VSX1-202ENST00000376709 STARD3Q14849 445 aa19.54■□□□□ 0.72
VSX1-202ENST00000376709 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.54■□□□□ 0.72
VSX1-202ENST00000376709 KCTD21Q4G0X4 260 aa19.54■□□□□ 0.72
VSX1-202ENST00000376709 CRTC3Q6UUV7 619 aa19.54■□□□□ 0.72
VSX1-202ENST00000376709 TERB1Q8NA31 727 aa19.54■□□□□ 0.72
VSX1-202ENST00000376709 HUS1BQ8NHY5 278 aa19.54■□□□□ 0.72
VSX1-202ENST00000376709 SUSD6Q92537 303 aa19.54■□□□□ 0.72
VSX1-202ENST00000376709 ZNF514Q96K75 400 aaPredicted RBP19.54■□□□□ 0.72
VSX1-202ENST00000376709 TMEM245Q9H330 911 aa19.54■□□□□ 0.72
VSX1-202ENST00000376709 SOX17Q9H6I2 414 aaPredicted RBP19.54■□□□□ 0.72
VSX1-202ENST00000376709 TRIM39Q9HCM9 518 aa19.54■□□□□ 0.72
VSX1-202ENST00000376709 ZDHHC4Q9NPG8 344 aa19.54■□□□□ 0.72
VSX1-202ENST00000376709 UNC80Q8N2C7 3258 aa19.54■□□□□ 0.72
VSX1-202ENST00000376709 EPOPA6NHQ4 379 aa19.54■□□□□ 0.72
VSX1-202ENST00000376709 G3V2T6 193 aa19.54■□□□□ 0.72
VSX1-202ENST00000376709 ETHE1O95571 254 aa19.54■□□□□ 0.72
VSX1-202ENST00000376709 TRPC1P48995 793 aa19.54■□□□□ 0.72
VSX1-202ENST00000376709 CDH15P55291 814 aa19.54■□□□□ 0.72
VSX1-202ENST00000376709 DPTQ07507 201 aa19.54■□□□□ 0.72
VSX1-202ENST00000376709 PCDH1Q08174 1060 aa19.54■□□□□ 0.72
VSX1-202ENST00000376709 DAG1Q14118 895 aa19.54■□□□□ 0.72
VSX1-202ENST00000376709 RBBP5Q15291 538 aaKnown RBP19.54■□□□□ 0.72
VSX1-202ENST00000376709 ABRAXAS1Q6UWZ7 409 aa19.54■□□□□ 0.72
VSX1-202ENST00000376709 ERN2Q76MJ5 926 aaKnown RBP19.54■□□□□ 0.72
VSX1-202ENST00000376709 PATL1Q86TB9 770 aaKnown RBP19.54■□□□□ 0.72
VSX1-202ENST00000376709 C1orf52Q8N6N3 182 aaKnown RBP19.54■□□□□ 0.72
VSX1-202ENST00000376709 FBXO15Q8NCQ5 510 aaPredicted RBP19.54■□□□□ 0.72
VSX1-202ENST00000376709 STARD8Q92502 1023 aa19.54■□□□□ 0.72
VSX1-202ENST00000376709 METTL2AQ96IZ6 378 aaKnown RBP19.54■□□□□ 0.72
VSX1-202ENST00000376709 UTS2RQ9UKP6 389 aa19.54■□□□□ 0.72
VSX1-202ENST00000376709 FCARP24071 287 aa19.53■□□□□ 0.72
VSX1-202ENST00000376709 TUBA4AP68366 448 aa19.53■□□□□ 0.72
VSX1-202ENST00000376709 SLC14A1Q13336 389 aa19.53■□□□□ 0.72
VSX1-202ENST00000376709 MED27Q6P2C8 311 aa19.53■□□□□ 0.72
VSX1-202ENST00000376709 ZNF621Q6ZSS3 439 aa19.53■□□□□ 0.72
VSX1-202ENST00000376709 DSG4Q86SJ6 1040 aa19.53■□□□□ 0.72
VSX1-202ENST00000376709 GPR156Q8NFN8 814 aa19.53■□□□□ 0.72
VSX1-202ENST00000376709 OR8J2Q8NGG1 315 aa19.53■□□□□ 0.72
VSX1-202ENST00000376709 CXorf40AQ8TE69 158 aa19.53■□□□□ 0.72
VSX1-202ENST00000376709 PBX4Q9BYU1 374 aa19.53■□□□□ 0.72
VSX1-202ENST00000376709 NKX2-4Q9H2Z4 354 aa19.53■□□□□ 0.72
VSX1-202ENST00000376709 VCX3AQ9NNX9 186 aa19.53■□□□□ 0.72
VSX1-202ENST00000376709 FAM120CQ9NX05 1096 aaKnown RBP19.53■□□□□ 0.72
VSX1-202ENST00000376709 DYRK1BQ9Y463 629 aa19.53■□□□□ 0.72
VSX1-202ENST00000376709 MAGED1Q9Y5V3 778 aaPredicted RBP19.53■□□□□ 0.72
VSX1-202ENST00000376709 SZT2Q5T011 3432 aa19.53■□□□□ 0.72
VSX1-202ENST00000376709 CLIC1O00299 241 aa19.53■□□□□ 0.72
VSX1-202ENST00000376709 EPN2O95208 641 aa19.53■□□□□ 0.72
VSX1-202ENST00000376709 PAPLNO95428 1278 aa19.53■□□□□ 0.72
VSX1-202ENST00000376709 ALPLP05186 524 aa19.53■□□□□ 0.72
VSX1-202ENST00000376709 ANXA4P09525 319 aaPredicted RBP19.53■□□□□ 0.72
VSX1-202ENST00000376709 MAGEA10P43363 369 aaPredicted RBP19.53■□□□□ 0.72
VSX1-202ENST00000376709 CCR3P51677 355 aa19.53■□□□□ 0.72
VSX1-202ENST00000376709 LSAMPQ13449 338 aa19.53■□□□□ 0.72
VSX1-202ENST00000376709 ZIK1Q3SY52 487 aaPredicted RBP19.53■□□□□ 0.72
VSX1-202ENST00000376709 SPIN4Q56A73 249 aa19.53■□□□□ 0.72
VSX1-202ENST00000376709 TANGO2Q6ICL3 276 aa19.53■□□□□ 0.72
VSX1-202ENST00000376709 ANKRD26P1Q6NSI1 321 aa19.53■□□□□ 0.72
VSX1-202ENST00000376709 SLCO4C1Q6ZQN7 724 aa19.53■□□□□ 0.72
VSX1-202ENST00000376709 ZNF547Q8IVP9 402 aa19.53■□□□□ 0.72
VSX1-202ENST00000376709 REPS1Q96D71 796 aa19.53■□□□□ 0.72
VSX1-202ENST00000376709 GNG14A0A1W2PPG7 69 aa19.52■□□□□ 0.72
VSX1-202ENST00000376709 C1QTNF3-AMACRE9PGA6 284 aa19.52■□□□□ 0.72
VSX1-202ENST00000376709 POP7O75817 140 aaKnown RBP19.52■□□□□ 0.72
VSX1-202ENST00000376709 CPSF4O95639 269 aaKnown RBP19.52■□□□□ 0.72
VSX1-202ENST00000376709 EPHX1P07099 455 aa19.52■□□□□ 0.72
VSX1-202ENST00000376709 ZNF8P17098 575 aaPredicted RBP19.52■□□□□ 0.72
VSX1-202ENST00000376709 ASMTP46597 345 aa19.52■□□□□ 0.72
VSX1-202ENST00000376709 HNRNPFP52597 415 aaKnown RBP19.52■□□□□ 0.72
VSX1-202ENST00000376709 IST1P53990 364 aa19.52■□□□□ 0.72
VSX1-202ENST00000376709 VAC14Q08AM6 782 aa19.52■□□□□ 0.72
VSX1-202ENST00000376709 LAPTM5Q13571 262 aa19.52■□□□□ 0.72
VSX1-202ENST00000376709 SERPINA11Q86U17 422 aa19.52■□□□□ 0.72
VSX1-202ENST00000376709 POP5Q969H6 163 aaKnown RBP19.52■□□□□ 0.72
VSX1-202ENST00000376709 C11orf24Q96F05 449 aaPredicted RBP19.52■□□□□ 0.72
VSX1-202ENST00000376709 MAGIXQ9H6Y5 334 aa19.52■□□□□ 0.72
VSX1-202ENST00000376709 PCM1Q15154 2024 aa19.52■□□□□ 0.72
VSX1-202ENST00000376709 A0A087WXM4 84 aa19.51■□□□□ 0.71
VSX1-202ENST00000376709 ANTXRLA6NF34 631 aa19.51■□□□□ 0.71
VSX1-202ENST00000376709 H0YAE9 185 aa19.51■□□□□ 0.71
VSX1-202ENST00000376709 SCAMP2O15127 329 aaKnown RBP19.51■□□□□ 0.71
VSX1-202ENST00000376709 ENGP17813 658 aa19.51■□□□□ 0.71
VSX1-202ENST00000376709 WNT3P56703 355 aa19.51■□□□□ 0.71
VSX1-202ENST00000376709 RPS13P62277 151 aaKnown RBP19.51■□□□□ 0.71
VSX1-202ENST00000376709 NFE2L1Q14494 772 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms