RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 MPC1LP0DKB6 136 aa20.03■□□□□ 0.8
VSX1-201ENST00000376707 ENO3P13929 434 aaPredicted RBP20.03■□□□□ 0.8
VSX1-201ENST00000376707 EZRP15311 586 aaKnown RBP20.03■□□□□ 0.8
VSX1-201ENST00000376707 SLC1A2P43004 574 aa20.03■□□□□ 0.8
VSX1-201ENST00000376707 ABATP80404 500 aa20.03■□□□□ 0.8
VSX1-201ENST00000376707 Q0VFX4 171 aa20.03■□□□□ 0.8
VSX1-201ENST00000376707 DSG2Q14126 1118 aa20.03■□□□□ 0.8
VSX1-201ENST00000376707 LONRF1Q17RB8 773 aa20.03■□□□□ 0.8
VSX1-201ENST00000376707 HKDC1Q2TB90 917 aa20.03■□□□□ 0.8
VSX1-201ENST00000376707 RNASEH2BQ5TBB1 312 aaKnown RBP20.03■□□□□ 0.8
VSX1-201ENST00000376707 THEMIS2Q5TEJ8 643 aa20.03■□□□□ 0.8
VSX1-201ENST00000376707 ZNF425Q6IV72 752 aa20.03■□□□□ 0.8
VSX1-201ENST00000376707 ISLR2Q6UXK2 745 aa20.03■□□□□ 0.8
VSX1-201ENST00000376707 FBXO15Q8NCQ5 510 aaPredicted RBP20.03■□□□□ 0.8
VSX1-201ENST00000376707 CALML6Q8TD86 181 aa20.03■□□□□ 0.8
VSX1-201ENST00000376707 ASB11Q8WXH4 323 aa20.03■□□□□ 0.8
VSX1-201ENST00000376707 SLCO2A1Q92959 643 aa20.03■□□□□ 0.8
VSX1-201ENST00000376707 C8orf44Q96CB5 159 aa20.03■□□□□ 0.8
VSX1-201ENST00000376707 MESP1Q9BRJ9 268 aa20.03■□□□□ 0.8
VSX1-201ENST00000376707 PCYOX1Q9UHG3 505 aa20.03■□□□□ 0.8
VSX1-201ENST00000376707 MED16Q9Y2X0 877 aa20.03■□□□□ 0.8
VSX1-201ENST00000376707 NUP210LQ5VU65 1888 aa20.03■□□□□ 0.8
VSX1-201ENST00000376707 NSG1A0A0A6YYJ2 146 aa20.02■□□□□ 0.8
VSX1-201ENST00000376707 E7ENX8 843 aa20.02■□□□□ 0.8
VSX1-201ENST00000376707 ZBTB14O43829 449 aa20.02■□□□□ 0.8
VSX1-201ENST00000376707 ANXA5P08758 320 aa20.02■□□□□ 0.8
VSX1-201ENST00000376707 CXCR2P25025 360 aa20.02■□□□□ 0.8
VSX1-201ENST00000376707 EMP2P54851 167 aa20.02■□□□□ 0.8
VSX1-201ENST00000376707 TAP2Q03519 686 aa20.02■□□□□ 0.8
VSX1-201ENST00000376707 ZNF169Q14929 603 aaPredicted RBP20.02■□□□□ 0.8
VSX1-201ENST00000376707 GARNL3Q5VVW2 1013 aa20.02■□□□□ 0.8
VSX1-201ENST00000376707 ZNF549Q6P9A3 640 aa20.02■□□□□ 0.8
VSX1-201ENST00000376707 LINC00696Q6ZRV3 163 aa20.02■□□□□ 0.8
VSX1-201ENST00000376707 KBTBD2Q8IY47 623 aa20.02■□□□□ 0.8
VSX1-201ENST00000376707 MMABQ96EY8 250 aaPredicted RBP20.02■□□□□ 0.8
VSX1-201ENST00000376707 OR2A5Q96R48 311 aa20.02■□□□□ 0.8
VSX1-201ENST00000376707 GPR21Q99679 349 aa20.02■□□□□ 0.8
VSX1-201ENST00000376707 BARD1Q99728 777 aaKnown RBP20.02■□□□□ 0.8
VSX1-201ENST00000376707 C14orf105Q9NVL8 296 aa20.02■□□□□ 0.8
VSX1-201ENST00000376707 TRMT1Q9NXH9 659 aaKnown RBP20.02■□□□□ 0.8
VSX1-201ENST00000376707 ERRFI1Q9UJM3 462 aaPredicted RBP20.02■□□□□ 0.8
VSX1-201ENST00000376707 DHRS7Q9Y394 339 aa20.02■□□□□ 0.8
VSX1-201ENST00000376707 COMMD10Q9Y6G5 202 aa20.02■□□□□ 0.8
VSX1-201ENST00000376707 PRRC2CQ9Y520 2896 aaKnown RBP20.01■□□□□ 0.79
VSX1-201ENST00000376707 IDSB3KWA1 339 aa20.01■□□□□ 0.79
VSX1-201ENST00000376707 TXNDC9O14530 226 aa20.01■□□□□ 0.79
VSX1-201ENST00000376707 FFAR3O14843 346 aa20.01■□□□□ 0.79
VSX1-201ENST00000376707 GPR42O15529 346 aa20.01■□□□□ 0.79
VSX1-201ENST00000376707 TSFMP43897 325 aaKnown RBP20.01■□□□□ 0.79
VSX1-201ENST00000376707 RELAQ04206 551 aa20.01■□□□□ 0.79
VSX1-201ENST00000376707 CDC16Q13042 620 aa20.01■□□□□ 0.79
VSX1-201ENST00000376707 TLR1Q15399 786 aa20.01■□□□□ 0.79
VSX1-201ENST00000376707 ATG9BQ674R7 924 aa20.01■□□□□ 0.79
VSX1-201ENST00000376707 LAPTM4BQ86VI4 370 aa20.01■□□□□ 0.79
VSX1-201ENST00000376707 SPNS2Q8IVW8 549 aa20.01■□□□□ 0.79
VSX1-201ENST00000376707 EBNA1BP2Q99848 306 aaKnown RBP20.01■□□□□ 0.79
VSX1-201ENST00000376707 SYNPO2LQ9H987 977 aa20.01■□□□□ 0.79
VSX1-201ENST00000376707 FBXO5Q9UKT4 447 aa20.01■□□□□ 0.79
VSX1-201ENST00000376707 SLC5A6Q9Y289 635 aa20.01■□□□□ 0.79
VSX1-201ENST00000376707 SPTBN1Q01082 2364 aaKnown RBP20.01■□□□□ 0.79
VSX1-201ENST00000376707 UTP20O75691 2785 aaKnown RBP20■□□□□ 0.79
VSX1-201ENST00000376707 GFYI3L273 518 aa20■□□□□ 0.79
VSX1-201ENST00000376707 HEXBP07686 556 aa20■□□□□ 0.79
VSX1-201ENST00000376707 TCP1P17987 556 aaKnown RBP20■□□□□ 0.79
VSX1-201ENST00000376707 MFAP5Q13361 173 aa20■□□□□ 0.79
VSX1-201ENST00000376707 PPP1R7Q15435 360 aa20■□□□□ 0.79
VSX1-201ENST00000376707 B3GNTL1Q67FW5 361 aaPredicted RBP20■□□□□ 0.79
VSX1-201ENST00000376707 CYHR1Q6ZMK1 362 aa20■□□□□ 0.79
VSX1-201ENST00000376707 UBE2R2Q712K3 238 aaPredicted RBP20■□□□□ 0.79
VSX1-201ENST00000376707 NDUFAF7Q7L592 441 aa20■□□□□ 0.79
VSX1-201ENST00000376707 PIWIL4Q7Z3Z4 852 aaKnown RBP20■□□□□ 0.79
VSX1-201ENST00000376707 CPNE9Q8IYJ1 553 aa20■□□□□ 0.79
VSX1-201ENST00000376707 SERBP1Q8NC51 408 aaKnown RBP eCLIP20■□□□□ 0.79
VSX1-201ENST00000376707 CD200R1Q8TD46 325 aa20■□□□□ 0.79
VSX1-201ENST00000376707 C5orf34Q96MH7 638 aa20■□□□□ 0.79
VSX1-201ENST00000376707 LMF1Q96S06 567 aa20■□□□□ 0.79
VSX1-201ENST00000376707 FAM167BQ9BTA0 163 aa20■□□□□ 0.79
VSX1-201ENST00000376707 DRC3Q9H069 523 aa20■□□□□ 0.79
VSX1-201ENST00000376707 MKKSQ9NPJ1 570 aaPredicted RBP20■□□□□ 0.79
VSX1-201ENST00000376707 ICE1Q9Y2F5 2266 aa19.99■□□□□ 0.79
VSX1-201ENST00000376707 A0A0A6YYC8 382 aaPredicted RBP19.99■□□□□ 0.79
VSX1-201ENST00000376707 I3L1I5 382 aaPredicted RBP19.99■□□□□ 0.79
VSX1-201ENST00000376707 HAT1O14929 419 aa19.99■□□□□ 0.79
VSX1-201ENST00000376707 KLHL18O94889 574 aa19.99■□□□□ 0.79
VSX1-201ENST00000376707 HAUS5O94927 633 aa19.99■□□□□ 0.79
VSX1-201ENST00000376707 COX6A1P12074 109 aa19.99■□□□□ 0.79
VSX1-201ENST00000376707 SLC26A3P40879 764 aa19.99■□□□□ 0.79
VSX1-201ENST00000376707 SKIV2L2P42285 1042 aaKnown RBP19.99■□□□□ 0.79
VSX1-201ENST00000376707 MPP1Q00013 466 aa19.99■□□□□ 0.79
VSX1-201ENST00000376707 PTK6Q13882 451 aa19.99■□□□□ 0.79
VSX1-201ENST00000376707 NDUFA9Q16795 377 aa19.99■□□□□ 0.79
VSX1-201ENST00000376707 HSP90AA5PQ58FG0 334 aa19.99■□□□□ 0.79
VSX1-201ENST00000376707 FAAH2Q6GMR7 532 aa19.99■□□□□ 0.79
VSX1-201ENST00000376707 KCNMB4Q86W47 210 aa19.99■□□□□ 0.79
VSX1-201ENST00000376707 PLD3Q8IV08 490 aa19.99■□□□□ 0.79
VSX1-201ENST00000376707 AMER3Q8N944 861 aa19.99■□□□□ 0.79
VSX1-201ENST00000376707 ST6GALNAC3Q8NDV1 305 aa19.99■□□□□ 0.79
VSX1-201ENST00000376707 GRHL3Q8TE85 626 aa19.99■□□□□ 0.79
VSX1-201ENST00000376707 DDX47Q9H0S4 455 aaKnown RBP19.99■□□□□ 0.79
VSX1-201ENST00000376707 H7BY64 318 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms