RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 MTIF3Q9H2K0 278 aaKnown RBP16.34■□□□□ 0.21
VARS-215ENST00000375663 NECTIN3Q9NQS3 549 aa16.34■□□□□ 0.21
VARS-215ENST00000375663 ABCB8Q9NUT2 735 aa16.34■□□□□ 0.21
VARS-215ENST00000375663 TMEM39AQ9NV64 488 aa16.34■□□□□ 0.21
VARS-215ENST00000375663 ZNF451Q9Y4E5 1061 aa16.34■□□□□ 0.21
VARS-215ENST00000375663 OAS3Q9Y6K5 1087 aaKnown RBP16.34■□□□□ 0.21
VARS-215ENST00000375663 WNT9AO14904 365 aa16.33■□□□□ 0.21
VARS-215ENST00000375663 CD72P21854 359 aa16.33■□□□□ 0.21
VARS-215ENST00000375663 ST3GAL4Q11206 333 aa16.33■□□□□ 0.21
VARS-215ENST00000375663 SLC13A2Q13183 592 aa16.33■□□□□ 0.21
VARS-215ENST00000375663 SLBPQ14493 270 aaKnown RBP eCLIP16.33■□□□□ 0.21
VARS-215ENST00000375663 RGMBQ6NW40 437 aa16.33■□□□□ 0.21
VARS-215ENST00000375663 NOXRED1Q6NXP6 359 aa16.33■□□□□ 0.21
VARS-215ENST00000375663 IKBIPQ70UQ0 350 aa16.33■□□□□ 0.21
VARS-215ENST00000375663 NPAS4Q8IUM7 802 aa16.33■□□□□ 0.21
VARS-215ENST00000375663 NPAS3Q8IXF0 933 aa16.33■□□□□ 0.21
VARS-215ENST00000375663 HS3ST5Q8IZT8 346 aa16.33■□□□□ 0.21
VARS-215ENST00000375663 METTL25Q8N6Q8 603 aa16.33■□□□□ 0.21
VARS-215ENST00000375663 OR8H1Q8NGG4 311 aa16.33■□□□□ 0.21
VARS-215ENST00000375663 ADAMTS15Q8TE58 950 aa16.33■□□□□ 0.21
VARS-215ENST00000375663 TRPS1Q9UHF7 1281 aa16.33■□□□□ 0.21
VARS-215ENST00000375663 MTMR11A4FU01 709 aa16.33■□□□□ 0.21
VARS-215ENST00000375663 TLR4O00206 839 aa16.33■□□□□ 0.21
VARS-215ENST00000375663 ORC5O43913 435 aa16.33■□□□□ 0.21
VARS-215ENST00000375663 CBSLP0DN79 551 aa16.33■□□□□ 0.21
VARS-215ENST00000375663 GTF2E2P29084 291 aaKnown RBP16.33■□□□□ 0.21
VARS-215ENST00000375663 CBSP35520 551 aa16.33■□□□□ 0.21
VARS-215ENST00000375663 MAGEA11P43364 429 aa16.33■□□□□ 0.21
VARS-215ENST00000375663 ANKRD13BQ86YJ7 626 aa16.33■□□□□ 0.21
VARS-215ENST00000375663 NXPE1Q8N323 547 aa16.33■□□□□ 0.21
VARS-215ENST00000375663 OR2AP1Q8NGE2 309 aa16.33■□□□□ 0.21
VARS-215ENST00000375663 EHD1Q9H4M9 534 aa16.33■□□□□ 0.21
VARS-215ENST00000375663 TRPV5Q9NQA5 729 aa16.33■□□□□ 0.21
VARS-215ENST00000375663 Q9Y3F1 56 aa16.33■□□□□ 0.21
VARS-215ENST00000375663 MAGED1Q9Y5V3 778 aaPredicted RBP16.33■□□□□ 0.21
VARS-215ENST00000375663 AP1G1O43747 822 aa16.33■□□□□ 0.2
VARS-215ENST00000375663 MITFO75030 526 aaPredicted RBP16.33■□□□□ 0.2
VARS-215ENST00000375663 TCF3P15923 654 aa16.33■□□□□ 0.2
VARS-215ENST00000375663 PCSK6P29122 969 aa16.33■□□□□ 0.2
VARS-215ENST00000375663 DCTP40126 519 aa16.33■□□□□ 0.2
VARS-215ENST00000375663 ZNF45Q02386 682 aa16.33■□□□□ 0.2
VARS-215ENST00000375663 CRB2Q5IJ48 1285 aa16.33■□□□□ 0.2
VARS-215ENST00000375663 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.33■□□□□ 0.2
VARS-215ENST00000375663 LRRTM3Q86VH5 581 aa16.33■□□□□ 0.2
VARS-215ENST00000375663 ZNF280BQ86YH2 543 aa16.33■□□□□ 0.2
VARS-215ENST00000375663 AQP11Q8NBQ7 271 aa16.33■□□□□ 0.2
VARS-215ENST00000375663 SLC7A5P2Q9GIP4 190 aa16.33■□□□□ 0.2
VARS-215ENST00000375663 NUMBLQ9Y6R0 609 aa16.33■□□□□ 0.2
VARS-215ENST00000375663 ZNF780BQ9Y6R6 833 aa16.33■□□□□ 0.2
VARS-215ENST00000375663 ZNF10P21506 573 aaPredicted RBP16.33■□□□□ 0.2
VARS-215ENST00000375663 ARL4DP49703 201 aa16.33■□□□□ 0.2
VARS-215ENST00000375663 RING1Q06587 406 aa16.33■□□□□ 0.2
VARS-215ENST00000375663 NFATC2Q13469 925 aa16.33■□□□□ 0.2
VARS-215ENST00000375663 GTDC1Q4AE62 458 aa16.33■□□□□ 0.2
VARS-215ENST00000375663 LETMD1Q6P1Q0 360 aa16.33■□□□□ 0.2
VARS-215ENST00000375663 NFKBIDQ8NI38 313 aa16.33■□□□□ 0.2
VARS-215ENST00000375663 KAT2AQ92830 837 aa16.33■□□□□ 0.2
VARS-215ENST00000375663 HEPHQ9BQS7 1158 aa16.33■□□□□ 0.2
VARS-215ENST00000375663 MED28Q9H204 178 aa16.33■□□□□ 0.2
VARS-215ENST00000375663 IMP3Q9NV31 184 aaKnown RBP16.33■□□□□ 0.2
VARS-215ENST00000375663 GPR45Q9Y5Y3 372 aa16.33■□□□□ 0.2
VARS-215ENST00000375663 ISM1B1AKI9 464 aa16.32■□□□□ 0.2
VARS-215ENST00000375663 PLOD2O00469 737 aa16.32■□□□□ 0.2
VARS-215ENST00000375663 ADH1AP07327 375 aa16.32■□□□□ 0.2
VARS-215ENST00000375663 SMIM18P0DKX4 95 aa16.32■□□□□ 0.2
VARS-215ENST00000375663 PSKH1P11801 424 aa16.32■□□□□ 0.2
VARS-215ENST00000375663 OR1E2P47887 323 aa16.32■□□□□ 0.2
VARS-215ENST00000375663 ARCN1P48444 511 aaKnown RBP16.32■□□□□ 0.2
VARS-215ENST00000375663 THOC7Q6I9Y2 204 aaKnown RBP16.32■□□□□ 0.2
VARS-215ENST00000375663 DCDC5Q6ZRR9 648 aa16.32■□□□□ 0.2
VARS-215ENST00000375663 FLCNQ8NFG4 579 aa16.32■□□□□ 0.2
VARS-215ENST00000375663 UFD1Q92890 307 aa16.32■□□□□ 0.2
VARS-215ENST00000375663 MAPKAP1Q9BPZ7 522 aa16.32■□□□□ 0.2
VARS-215ENST00000375663 EFCAB11Q9BUY7 163 aa16.32■□□□□ 0.2
VARS-215ENST00000375663 PCDHGA10Q9Y5H3 936 aa16.32■□□□□ 0.2
VARS-215ENST00000375663 ARAP2Q8WZ64 1704 aa16.32■□□□□ 0.2
VARS-215ENST00000375663 OR5F1O95221 314 aa16.32■□□□□ 0.2
VARS-215ENST00000375663 DSTNP60981 165 aa16.32■□□□□ 0.2
VARS-215ENST00000375663 NPRL3Q12980 569 aa16.32■□□□□ 0.2
VARS-215ENST00000375663 KLHL22Q53GT1 634 aa16.32■□□□□ 0.2
VARS-215ENST00000375663 SPIN4Q56A73 249 aa16.32■□□□□ 0.2
VARS-215ENST00000375663 TMEM53Q6P2H8 277 aa16.32■□□□□ 0.2
VARS-215ENST00000375663 TPRG1Q6ZUI0 275 aa16.32■□□□□ 0.2
VARS-215ENST00000375663 IGFN1Q86VF2 1251 aa16.32■□□□□ 0.2
VARS-215ENST00000375663 ZNF675Q8TD23 568 aa16.32■□□□□ 0.2
VARS-215ENST00000375663 RFKQ969G6 155 aa16.32■□□□□ 0.2
VARS-215ENST00000375663 ITPKCQ96DU7 683 aa16.32■□□□□ 0.2
VARS-215ENST00000375663 FERD3LQ96RJ6 166 aa16.32■□□□□ 0.2
VARS-215ENST00000375663 MYOCQ99972 504 aa16.32■□□□□ 0.2
VARS-215ENST00000375663 NAA50Q9GZZ1 169 aaKnown RBP16.32■□□□□ 0.2
VARS-215ENST00000375663 KIAA1551Q9HCM1 1747 aa16.32■□□□□ 0.2
VARS-215ENST00000375663 TOGARAM1Q9Y4F4 1720 aa16.32■□□□□ 0.2
VARS-215ENST00000375663 FAM86C2PA6NEL3 165 aa16.32■□□□□ 0.2
VARS-215ENST00000375663 PI15O43692 258 aa16.32■□□□□ 0.2
VARS-215ENST00000375663 RCVRNP35243 200 aa16.32■□□□□ 0.2
VARS-215ENST00000375663 RAPSNQ13702 412 aa16.32■□□□□ 0.2
VARS-215ENST00000375663 MFSD4BQ5TF39 518 aa16.32■□□□□ 0.2
VARS-215ENST00000375663 CHST9Q7L1S5 443 aa16.32■□□□□ 0.2
VARS-215ENST00000375663 THOC6Q86W42 341 aaKnown RBP16.32■□□□□ 0.2
VARS-215ENST00000375663 OR13J1Q8NGT2 312 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms