RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 MT-ND1P03886 318 aa15.05■□□□□ 0
CCDC40-202ENST00000374876 CDH1P12830 882 aa15.05■□□□□ 0
CCDC40-202ENST00000374876 PLA2G4EQ3MJ16 856 aa15.05■□□□□ 0
CCDC40-202ENST00000374876 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.05■□□□□ 0
CCDC40-202ENST00000374876 PIP5KL1Q5T9C9 394 aa15.05■□□□□ 0
CCDC40-202ENST00000374876 AGBL4Q5VU57 503 aa15.05■□□□□ 0
CCDC40-202ENST00000374876 ERN2Q76MJ5 926 aaKnown RBP15.05■□□□□ 0
CCDC40-202ENST00000374876 PARS2Q7L3T8 475 aaKnown RBP15.05■□□□□ 0
CCDC40-202ENST00000374876 LRRC70Q7Z2Q7 622 aa15.05■□□□□ 0
CCDC40-202ENST00000374876 DTWD1Q8N5C7 304 aa15.05■□□□□ 0
CCDC40-202ENST00000374876 SUMF1Q8NBK3 374 aa15.05■□□□□ 0
CCDC40-202ENST00000374876 PPP1R16AQ96I34 528 aa15.05■□□□□ 0
CCDC40-202ENST00000374876 VPS50Q96JG6 964 aa15.05■□□□□ 0
CCDC40-202ENST00000374876 THUMPD3Q9BV44 507 aaKnown RBP15.05■□□□□ 0
CCDC40-202ENST00000374876 SLC12A9Q9BXP2 914 aa15.05■□□□□ 0
CCDC40-202ENST00000374876 CLK4Q9HAZ1 481 aaKnown RBP15.05■□□□□ 0
CCDC40-202ENST00000374876 ASIC5Q9NY37 505 aa15.05■□□□□ 0
CCDC40-202ENST00000374876 PKD2L2Q9NZM6 624 aa15.05■□□□□ 0
CCDC40-202ENST00000374876 DMTF1Q9Y222 760 aa15.05■□□□□ 0
CCDC40-202ENST00000374876 SPAG17Q6Q759 2223 aa15.05■□□□□ -0
CCDC40-202ENST00000374876 TBC1D3DA0A087WVF3 549 aa15.05■□□□□ -0
CCDC40-202ENST00000374876 TBC1D3IA0A087WXS9 549 aa15.05■□□□□ -0
CCDC40-202ENST00000374876 TBC1D3EA0A087X179 549 aa15.05■□□□□ -0
CCDC40-202ENST00000374876 TBC1D3KA0A087X1G2 549 aa15.05■□□□□ -0
CCDC40-202ENST00000374876 TBC1D3FA6NER0 549 aaPredicted RBP15.05■□□□□ -0
CCDC40-202ENST00000374876 TBC1D3LB9A6J9 549 aa15.05■□□□□ -0
CCDC40-202ENST00000374876 EI24O14681 340 aa15.05■□□□□ -0
CCDC40-202ENST00000374876 DFNA5O60443 496 aa15.05■□□□□ -0
CCDC40-202ENST00000374876 SEMA4FO95754 770 aa15.05■□□□□ -0
CCDC40-202ENST00000374876 PGRP06401 933 aa15.05■□□□□ -0
CCDC40-202ENST00000374876 ANXA6P08133 673 aa15.05■□□□□ -0
CCDC40-202ENST00000374876 TBC1D3HP0C7X1 549 aa15.05■□□□□ -0
CCDC40-202ENST00000374876 ATP1B2P14415 290 aaPredicted RBP15.05■□□□□ -0
CCDC40-202ENST00000374876 ITGB7P26010 798 aa15.05■□□□□ -0
CCDC40-202ENST00000374876 GGT5P36269 586 aa15.05■□□□□ -0
CCDC40-202ENST00000374876 DHPSP49366 369 aaPredicted RBP15.05■□□□□ -0
CCDC40-202ENST00000374876 TAS2R38P59533 333 aa15.05■□□□□ -0
CCDC40-202ENST00000374876 SFSWAPQ12872 951 aaKnown RBP15.05■□□□□ -0
CCDC40-202ENST00000374876 BOP1Q14137 746 aaKnown RBP15.05■□□□□ -0
CCDC40-202ENST00000374876 SPANXN4Q5MJ08 99 aa15.05■□□□□ -0
CCDC40-202ENST00000374876 PMS2CLQ68D20 193 aa15.05■□□□□ -0
CCDC40-202ENST00000374876 TBC1D3GQ6DHY5 549 aa15.05■□□□□ -0
CCDC40-202ENST00000374876 TBC1D3CQ6IPX1 549 aa15.05■□□□□ -0
CCDC40-202ENST00000374876 SLC36A4Q6YBV0 504 aa15.05■□□□□ -0
CCDC40-202ENST00000374876 TBC1D3Q8IZP1 549 aaPredicted RBP15.05■□□□□ -0
CCDC40-202ENST00000374876 GTF2H4Q92759 462 aa15.05■□□□□ -0
CCDC40-202ENST00000374876 ZC3H10Q96K80 434 aaKnown RBP15.05■□□□□ -0
CCDC40-202ENST00000374876 BDH2Q9BUT1 245 aa15.05■□□□□ -0
CCDC40-202ENST00000374876 SGK2Q9HBY8 427 aa15.05■□□□□ -0
CCDC40-202ENST00000374876 VAPAQ9P0L0 249 aa15.05■□□□□ -0
CCDC40-202ENST00000374876 FZD4Q9ULV1 537 aa15.05■□□□□ -0
CCDC40-202ENST00000374876 PIKFYVEQ9Y2I7 2098 aa15.05■□□□□ -0
CCDC40-202ENST00000374876 CEP192Q8TEP8 1941 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 GSTA4O15217 222 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 NUAK1O60285 661 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 GNAO1P09471 354 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 ADRB3P13945 408 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 GGT1P19440 569 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 MYF6P23409 242 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 NFKBIAP25963 317 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 MAOBP27338 520 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 HNMTP50135 292 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 ADPRHP54922 357 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 MAP7Q14244 749 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 LPCAT2Q7L5N7 544 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 KRTCAP2Q8N6L1 136 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 TNIP2Q8NFZ5 429 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 OR2T12Q8NG77 320 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 ZFP28Q8NHY6 868 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 HM13Q8TCT9 377 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 CYGBQ8WWM9 190 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 SELENOMQ8WWX9 145 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 ASB11Q8WXH4 323 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 ZNF583Q96ND8 569 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 SH3GL1Q99961 368 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 HDAC8Q9BY41 377 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 ACPTQ9BZG2 426 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 ELOVL6Q9H5J4 265 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 CLMPQ9H6B4 373 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 TMPRSS11EQ9UL52 423 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 RAB23Q9ULC3 237 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 SNX6Q9UNH7 406 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 ZFC3H1O60293 1989 aaKnown RBP15.04■□□□□ -0
CCDC40-202ENST00000374876 PLXND1Q9Y4D7 1925 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 PDYNP01213 254 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 MPC1LP0DKB6 136 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 BCKDHAP12694 445 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 TIMP2P16035 220 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 ZNF23P17027 643 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 EPORP19235 508 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 CYP4F3Q08477 520 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 DYNC1I2Q13409 638 aaKnown RBP15.04■□□□□ -0
CCDC40-202ENST00000374876 LSAMPQ13449 338 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 SLC36A3Q495N2 470 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 FAM98BQ52LJ0 330 aaKnown RBP15.04■□□□□ -0
CCDC40-202ENST00000374876 TTC33Q6PID6 262 aaPredicted RBP15.04■□□□□ -0
CCDC40-202ENST00000374876 BRAT1Q6PJG6 821 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 SUSD1Q6UWL2 747 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 CLHC1Q8NHS4 586 aa15.04■□□□□ -0
CCDC40-202ENST00000374876 MAGEE2Q8TD90 523 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms