RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 LGR4Q9BXB1 951 aa13.85□□□□□ -0.19
HMGA1-203ENST00000374116 ANKRD60Q9BZ19 345 aa13.85□□□□□ -0.19
HMGA1-203ENST00000374116 PCDHAC1Q9H158 963 aa13.85□□□□□ -0.19
HMGA1-203ENST00000374116 PCED1AQ9H1Q7 454 aa13.85□□□□□ -0.19
HMGA1-203ENST00000374116 KCNH6Q9H252 994 aa13.85□□□□□ -0.19
HMGA1-203ENST00000374116 RIC8BQ9NVN3 520 aa13.85□□□□□ -0.19
HMGA1-203ENST00000374116 TMEM45AQ9NWC5 275 aa13.85□□□□□ -0.19
HMGA1-203ENST00000374116 MAP10Q9P2G4 905 aa13.85□□□□□ -0.19
HMGA1-203ENST00000374116 GIMAP2Q9UG22 337 aa13.85□□□□□ -0.19
HMGA1-203ENST00000374116 ZNF225Q9UK10 706 aa13.85□□□□□ -0.19
HMGA1-203ENST00000374116 TIMM22Q9Y584 194 aa13.85□□□□□ -0.19
HMGA1-203ENST00000374116 AP4S1Q9Y587 144 aa13.85□□□□□ -0.19
HMGA1-203ENST00000374116 PRSS21Q9Y6M0 314 aa13.85□□□□□ -0.19
HMGA1-203ENST00000374116 EP300Q09472 2414 aaPredicted RBP13.84□□□□□ -0.19
HMGA1-203ENST00000374116 TDRD6O60522 2096 aaKnown RBP13.84□□□□□ -0.19
HMGA1-203ENST00000374116 TCRBV3S1A0A5B6 114 aa13.84□□□□□ -0.19
HMGA1-203ENST00000374116 AKT2P31751 481 aa13.84□□□□□ -0.19
HMGA1-203ENST00000374116 SPAM1P38567 509 aa13.84□□□□□ -0.19
HMGA1-203ENST00000374116 RGS4P49798 205 aa13.84□□□□□ -0.19
HMGA1-203ENST00000374116 SLC7A2P52569 658 aa13.84□□□□□ -0.19
HMGA1-203ENST00000374116 ATXN3P54252 364 aaPredicted RBP13.84□□□□□ -0.19
HMGA1-203ENST00000374116 NME5P56597 212 aa13.84□□□□□ -0.19
HMGA1-203ENST00000374116 C21orf59P57076 290 aa13.84□□□□□ -0.19
HMGA1-203ENST00000374116 ESRRGP62508 458 aa13.84□□□□□ -0.19
HMGA1-203ENST00000374116 SPEM2Q0P670 501 aa13.84□□□□□ -0.19
HMGA1-203ENST00000374116 TCEA2Q15560 299 aa13.84□□□□□ -0.19
HMGA1-203ENST00000374116 MOGQ16653 247 aa13.84□□□□□ -0.19
HMGA1-203ENST00000374116 VPS26BQ4G0F5 336 aa13.84□□□□□ -0.19
HMGA1-203ENST00000374116 ZNF648Q5T619 568 aaPredicted RBP13.84□□□□□ -0.19
HMGA1-203ENST00000374116 SLC2A7Q6PXP3 512 aa13.84□□□□□ -0.19
HMGA1-203ENST00000374116 MACC1Q6ZN28 852 aa13.84□□□□□ -0.19
HMGA1-203ENST00000374116 Q6ZSR6 202 aa13.84□□□□□ -0.19
HMGA1-203ENST00000374116 OR2I1PQ8NGU4 316 aa13.84□□□□□ -0.19
HMGA1-203ENST00000374116 FAM83DQ9H4H8 585 aa13.84□□□□□ -0.19
HMGA1-203ENST00000374116 LIN28AQ9H9Z2 209 aaKnown RBP13.84□□□□□ -0.19
HMGA1-203ENST00000374116 LATS2Q9NRM7 1088 aa13.84□□□□□ -0.19
HMGA1-203ENST00000374116 AIG1Q9NVV5 245 aa13.84□□□□□ -0.19
HMGA1-203ENST00000374116 PKD2L2Q9NZM6 624 aa13.84□□□□□ -0.19
HMGA1-203ENST00000374116 ABCD2Q9UBJ2 740 aa13.84□□□□□ -0.19
HMGA1-203ENST00000374116 TMEM131Q92545 1883 aa13.83□□□□□ -0.19
HMGA1-203ENST00000374116 A0A087WXM4 84 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 A0A1B0GVT2 93 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 FADS2P1A8MWK0 482 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 PSMD11O00231 422 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 FPGTO14772 594 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 CNOT3O75175 753 aaKnown RBP13.83□□□□□ -0.2
HMGA1-203ENST00000374116 SOD1P00441 154 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 UGT1A6P19224 532 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 CAPN3P20807 821 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 UGT1A1P22309 533 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 UGT1A4P22310 534 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 DGKAP23743 735 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 CD38P28907 300 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 PRDX3P30048 256 aaKnown RBP13.83□□□□□ -0.2
HMGA1-203ENST00000374116 UGT1A3P35503 534 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 UGT1A5P35504 534 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 ERVK-8P63133 956 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 INAQ16352 499 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 ANKDD1AQ495B1 522 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 ZNF542PQ5EBM4 170 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 TRIM61Q5EBN2 209 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 IL23RQ5VWK5 629 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 PNCKQ6P2M8 343 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 SBSNQ6UWP8 590 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 ASCL5Q7RTU5 278 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 DHFR2Q86XF0 187 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 SLC22A18ASQ8N1D0 253 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 NXPE1Q8N323 547 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 LKAAEAR1Q8TD35 194 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 ZUFSPQ96AP4 578 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 C12orf43Q96C57 262 aaKnown RBP13.83□□□□□ -0.2
HMGA1-203ENST00000374116 CNDP2Q96KP4 475 aaKnown RBP13.83□□□□□ -0.2
HMGA1-203ENST00000374116 EFHD1Q9BUP0 239 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 BRINP2Q9C0B6 783 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 IRF2BPLQ9H1B7 796 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 CLK4Q9HAZ1 481 aaKnown RBP13.83□□□□□ -0.2
HMGA1-203ENST00000374116 SLC52A3Q9NQ40 469 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 OLAHQ9NV23 265 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 TMEM9Q9P0T7 183 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 ANKRD12Q6UB98 2062 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 TP53BP1Q12888 1972 aaPredicted RBP13.83□□□□□ -0.2
HMGA1-203ENST00000374116 OTOGLQ3ZCN5 2332 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 A0A1W2PP18 115 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 A0A1W2PR77 199 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 K7EPI3 171 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 MTX2O75431 263 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 OR4F21O95013 312 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 EPN2O95208 641 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 THEGLP0DJG4 465 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 DCKP27707 260 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 SLC7A1P30825 629 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 GPR1P46091 355 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 KCNK10P57789 538 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 RACK1P63244 317 aaKnown RBP13.83□□□□□ -0.2
HMGA1-203ENST00000374116 BNC1Q01954 994 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 SF3A2Q15428 464 aaKnown RBP13.83□□□□□ -0.2
HMGA1-203ENST00000374116 C6orf10Q5SRN2 563 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 GPRC6AQ5T6X5 926 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 LAIR1Q6GTX8 287 aa13.83□□□□□ -0.2
HMGA1-203ENST00000374116 MYO1HQ8N1T3 1032 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms